FC917776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917776 vs. ExPASy Swiss-Prot
Match: THRC1_ARATH (Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TS1 PE=1 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 3.459e-88 Identity = 167/214 (78.04%), Postives = 173/214 (80.84%), Query Frame = 2 Query: 224 DENIRDEARRQRSTTNNTFSAKYVPFNAGPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRV--------------------------------GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 769 ++NIRDEARR RS N FSAKYVPFNA P S E YSLDEIVYRSRSGGLLDV+HDME+LK+FDGAYWRDLFDSRV GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS+AQLVQPIANGAFV Sbjct: 61 EDNIRDEARRNRSNAVNPFSAKYVPFNAAPGSTESYSLDEIVYRSRSGGLLDVEHDMEALKRFDGAYWRDLFDSRVGKSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFV 274
BLAST of FC917776 vs. ExPASy Swiss-Prot
Match: THRC_SOLTU (Threonine synthase, chloroplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.041e-84 Identity = 163/214 (76.17%), Postives = 172/214 (80.37%), Query Frame = 2 Query: 224 DENIRDEARRQRSTTNNTFSAKYVPFNAGPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRV--------------------------------GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 769 DENIR+EARR S+ N FSA+YVPFNAGP+S E+YSLDEIVYRSRSGGLLDVQHDM++LKKFDG YWR LFDSRV GNSNLFWAERFGKQFLGM DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM +PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS+AQLVQPIANGAFV Sbjct: 56 DENIREEARRHCSSHN--FSARYVPFNAGPNSDEWYSLDEIVYRSRSGGLLDVQHDMDALKKFDGQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKQFLGMTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFV 267
BLAST of FC917776 vs. ExPASy Swiss-Prot
Match: THRC2_ARATH (Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TS2 PE=1 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.457e-78 Identity = 161/270 (59.63%), Postives = 181/270 (67.04%), Query Frame = 2 Query: 56 MASCSLFHPQTKIKPFNQNHPRLTYRPPTVISCSFXXXXXXXXXXXXXXXXXXXXXDENIRDEARRQRSTTNNTFSAKYVPFNAGPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRV--------------------------------GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 769 MAS SL H T + +H + +P + S + DENIRDEARR+ N SA+YVPFNA P S E YSLDEIVYRS+SG LLDVQHD +LK++DG +WR+LFDSRV GNSNLFWAERFGKQ+L MNDLWVKHCGISHTGSFKDLGM+VLVSQVNRLRKM +PV+GVGCASTGDTSAALSAYCASAGIPSIVFLPA+KIS+AQLVQPIANGAFV Sbjct: 1 MASFSLPHSAT----YFPSHSETSLKPHSAASFTVRCTSASPAVPPQTPQKPRRSPDENIRDEARRRPHQLQN-LSARYVPFNAPPSSTESYSLDEIVYRSQSGALLDVQHDFAALKRYDGEFWRNLFDSRVGKTNWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQYLQMNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCASAGIPSIVFLPADKISMAQLVQPIANGAFV 265
BLAST of FC917776 vs. ExPASy Swiss-Prot
Match: THRC_METJA (Probable threonine synthase OS=Methanocaldococcus jannaschii GN=thrC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.457e-19 Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 329 YSLDEIVYRSRSGGLLDVQHDMESLK---------KFDGAYWRDLF------DSRV-----GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 769 Y +DEI+Y GGLL++ +D E +K K + WR L +S++ G + L+ K+ LG+ +L+VK+ G + TGSFKD GMTV V++ N L V VGCASTG+TSA+L+AY A +G IV LP K+++ +L Q + GA V Sbjct: 12 YDVDEIIYTCECGGLLEIIYDYEEIKDKVSEEKLRKREIGVWRYLEYLPVKDESKIVSLCEGGTPLYRCNNLEKE-LGIKELYVKNEGANPTGSFKDRGMTVGVTRANELG-----VEVVGCASTGNTSASLAAYSARSGKKCIVLLPEGKVALGKLAQAMFYGAKV 172 The following BLAST results are available for this feature:
BLAST of FC917776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917776 ID=FC917776; Name=FC917776; organism=Citrus clementina; type=EST; length=771bpback to top |