FC917858

Overview
NameFC917858
Unique NameFC917858
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length768
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7949 contig Ccv1_Contig7949:9..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 232.646 bits (592), Expect = 1.776e-60
Identity = 122/243 (50.21%), Postives = 153/243 (62.96%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVAPNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPRAHGQAGXXXXXXXXXXXXXXXXXXXXKNDAPKKEAKPAPE 731
            G LYTYPENFRA+K  IAAQYSGA +++A +FVFG+TN+S+ FLK FP GKVPAFES DG  +  ESNAIAYYV+N  LRG+    +AQ++QW+++AD E+LPASC  VFP+LGIM +NK    RA+ D+  AL  L+ HLLTRT+LVGER++LADIVV CTLLH  QH               WF TL NQ  V  V+ + +   +AG                    K +   K  K  PE
Sbjct:    4 GKLYTYPENFRAFKALIAAQYSGAKLEIAKSFVFGETNKSDAFLKSFPLGKVPAFESADGHCI-AESNAIAYYVANETLRGSSDLEKAQIIQWMTFADTEILPASCTWVFPVLGIMQFNKQATARAKEDIDKALQALDDHLLTRTYLVGERITLADIVVTCTLLHLYQHVLDEAFRKSYVNTNRWFITLINQKQVKAVIGDFKLCEKAGEFDPKKYAEFQAAIGSGEKKKTEKAPKAVKAKPE 245          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 8.538e-55
Identity = 128/265 (48.30%), Postives = 157/265 (59.25%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVAPNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDAS-SQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVL-------------PEPRAHGQA-GXXXXXXXXXXXXXXXXXXXXKNDAPKKEAKPAPEDDIDEEA 752
            G LYTYPENFRAYK  IAAQYSGA VKVA NF FG+TN+S EFLKKFP GKVPAFE+ +G+  L+ESNAIAY ++N  LRG      QAQV QW+S+AD E++PASCA VFPLLGI+P  KN+  + +A+  A L  LN  L   TFL GER++LADIVV+ +LLH  ++               WF T+ NQ  V  V+             P+  A  QA                      K +APKK A+PA E D  +EA
Sbjct:    4 GTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQ-YLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQQKNSTAKQEAE--AVLQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCEKALVFDPKKYAEFQAKTGAAKPQQQAQQQKQEKKPKEKKEAPKKAAEPAEELDAADEA 265          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53
Identity = 124/270 (45.93%), Postives = 150/270 (55.56%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPRAHGQAGXXXXXXXXXXXXXXXXXXXXKNDAPKKEAK--------------PAPEDDIDEEAKGV 761
            G LYTYP+N+RAYK  IAAQYSG  +KVA   P F FG TN++ EFLKKFP GKVPAFE KDG  L  ES+AIA+YV N  LRGT    QAQV+QW+S++D  ++P + A VFP LGIM YNK    +A+  +K  L  L+SHL TRTFLVGER++LADI V C+LL   +                WF T  NQP    VL E +                          K + P KE K              PAPEDD+DE  K +
Sbjct:    4 GTLYTYPDNWRAYKPLIAAQYSGFPIKVASSAPEFQFGVTNKTPEFLKKFPLGKVPAFEGKDGFCLF-ESSAIAHYVGNDELRGTTRLHQAQVIQWVSFSDSHIVPPASAWVFPTLGIMQYNKQATEQAKEGIKTVLGVLDSHLQTRTFLVGERITLADITVTCSLLWLYKQVLEPSFRQPFGNVTRWFVTCVNQPEFRAVLGEVKL---CDKMAQFDAKKFAEMQPKKETPKKEKPAKEPKKEKEEKKKAAPTPAPAPEDDLDESEKAL 269          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 6.119e-53
Identity = 122/263 (46.39%), Postives = 152/263 (57.79%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-----AHGQAGXXXXXXXXXXXXXXXXXXXXKNDAP-------KKEAKPAPEDDIDE 746
            G LYTYPEN+RA+K  IAAQYSGA V+V    P+F FGQTN++ EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM +NK     A+ ++K  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    VL E +     A   A                     +   P       KK A PAPE+++DE
Sbjct:    4 GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 7.992e-53
Identity = 121/263 (46.01%), Postives = 152/263 (57.79%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-----AHGQAGXXXXXXXXXXXXXXXXXXXXKNDAP-------KKEAKPAPEDDIDE 746
            G LYTYPEN+RA+K  IAAQYSGA V+V    P+F FGQTN++ EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM +NK     A+ ++K  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    +L E +     A   A                     +   P       KK A PAPE+++DE
Sbjct:    4 GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 1.044e-52
Identity = 120/263 (45.63%), Postives = 152/263 (57.79%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-----AHGQAGXXXXXXXXXXXXXXXXXXXXKNDAP-------KKEAKPAPEDDIDE 746
            G LYTYPEN+RA+K  IAAQYSGA ++V    P+F FGQTN++ EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM +NK     A+ ++K  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    +L E +     A   A                     +   P       KK A PAPE+++DE
Sbjct:    4 GTLYTYPENWRAFKALIAAQYSGAQIRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREEKQKPQTERKEEKKAAAPAPEEEMDE 265          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.363e-52
Identity = 121/261 (46.36%), Postives = 150/261 (57.47%), Query Frame = 3
Query:    9 LYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-----AHGQAGXXXXXXXXXXXXXXXXXXXXKNDAP-------KKEAKPAPEDDIDE 746
            LYTYPEN+RA+K  IAAQYSGA V+V    P+F FGQTN + EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM YNK     A+ +++  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    VL E +     A   A                     +   P       KK A PAPE+++DE
Sbjct:    1 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEELDE 260          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.363e-52
Identity = 121/263 (46.01%), Postives = 152/263 (57.79%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-----AHGQAGXXXXXXXXXXXXXXXXXXXXKNDAP-------KKEAKPAPEDDIDE 746
            G LYTYPEN+RA+K  IAAQYSGA V+V    P+F FGQTN++ EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM +NK     A+ +++  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    VL E +     A   A                     +   P       KK A PAPE+++DE
Sbjct:    4 GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.363e-52
Identity = 121/263 (46.01%), Postives = 152/263 (57.79%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-----AHGQAGXXXXXXXXXXXXXXXXXXXXKNDAP-------KKEAKPAPEDDIDE 746
            G LYTYPEN+RA+K  IAAQYSGA V+V    P+F FGQTN++ EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM +NK     A+ +++  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    VL E +     A   A                     +   P       KK A PAPE+++DE
Sbjct:    4 GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDE 265          
BLAST of FC917858 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.037e-52
Identity = 120/266 (45.11%), Postives = 152/266 (57.14%), Query Frame = 3
Query:    3 GLLYTYPENFRAYKVFIAAQYSGADVKVA---PNFVFGQTNQSEEFLKKFPAGKVPAFESKDGKVLLTESNAIAYYVSNAALRGTDASSQAQVLQWLSWADGELLPASCACVFPLLGIMPYNKNNVTRAQADLKAALATLNSHLLTRTFLVGERVSLADIVVYCTLLHALQHXXXXXXXXXXXXXXXWFRTLANQPPVLKVLPEPR-------------AHGQAGXXXXXXXXXXXXXXXXXXXXKNDA--PKKEAKPAPEDDIDE 746
            G LYTYPEN+RA+K  IAAQYSGA V+V    P+F FGQTN++ EFL+KFPAGKVPAFE  DG  +  ESNAIAYYVSN  LRG+   + AQV+QW+S+AD +++P +   VFP LGIM +NK     A+ +++  L  L++HL TRTFLVGERV+LADI V CTLL   +                WF T  NQP    VL E +             A  Q                      + +    KK A PAPE+++DE
Sbjct:    4 GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF-ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREEKLKPQAERKEGKEEKKAAAPAPEEELDE 268          
The following BLAST results are available for this feature:
BLAST of FC917858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
EF1G_ARTSA1.776e-6050.21Elongation factor 1-gamma OS=Artemia salina PE=1 S... [more]
EF1G_DROME8.538e-5548.30Elongation factor 1-gamma OS=Drosophila melanogast... [more]
EF1GA_XENLA1.233e-5345.93Elongation factor 1-gamma-A OS=Xenopus laevis GN=e... [more]
EF1G_RABIT6.119e-5346.39Elongation factor 1-gamma OS=Oryctolagus cuniculus... [more]
EF1G_MOUSE7.992e-5346.01Elongation factor 1-gamma OS=Mus musculus GN=Eef1g... [more]
EF1G_RAT1.044e-5245.63Elongation factor 1-gamma OS=Rattus norvegicus GN=... [more]
EF1G_PIG1.363e-5246.36Elongation factor 1-gamma (Fragment) OS=Sus scrofa... [more]
EF1G_MACFA1.363e-5246.01Elongation factor 1-gamma OS=Macaca fascicularis G... [more]
EF1G_HORSE1.363e-5246.01Elongation factor 1-gamma OS=Equus caballus GN=EEF... [more]
EF1G_BOVIN3.037e-5245.11Elongation factor 1-gamma OS=Bos taurus GN=EEF1G P... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA94CD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917858 ID=FC917858; Name=FC917858; organism=Citrus clementina; type=EST; length=768bp
CCGGGTTACTTTATACTTATCCGGAAAACTTCCGTGCGTACAAAGTGTTC
ATCGCCGCACAGTACTCCGGAGCTGATGTCAAAGTAGCGCCCAACTTTGT
TTTTGGACAAACAAACCAGTCAGAAGAATTCCTCAAGAAATTCCCGGCCG
GCAAAGTCCCAGCTTTTGAAAGCAAAGATGGAAAGGTGCTGTTGACTGAG
AGCAATGCCATCGCTTACTATGTATCAAATGCCGCCCTCCGCGGCACAGA
CGCGTCGAGCCAGGCGCAGGTCCTGCAGTGGCTGTCGTGGGCCGACGGCG
AGCTGCTGCCCGCCTCCTGCGCCTGCGTCTTCCCCCTCCTCGGGATCATG
CCCTACAACAAGAACAACGTGACGCGTGCGCAGGCCGACCTCAAGGCCGC
GCTCGCCACGCTCAACTCCCACCTGCTGACGCGCACCTTCCTGGTGGGCG
AGCGCGTGTCCCTGGCCGACATAGTGGTGTACTGCACCCTGCTGCACGCG
CTGCAGCACGCCGTGGAGCCCGCGGGCCGCGCCGCCGCGCCCGCCGTGGA
GCGCTGGTTCCGCACCCTCGCCAACCAGCCGCCCGTGCTCAAGGTGCTCC
CCGAGCCCCGTGCTCACGGACAAGCCGGTCGTGTACGACCCCAACAAGTT
CAACCAGTCCCAGCCCCAAGGCCAAGAAGGACGCCCCCTAAGAATGACGC
TCCCAAGAAGGAGGCCAAGCCCGCCCCCGAGGACGACATTGATGAAGAAG
CCAAAGGAGTCCAAAGGG
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