FC917867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_DROME (Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 4.094e-43 Identity = 117/300 (39.00%), Postives = 161/300 (53.67%), Query Frame = 2 Query: 41 TSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESM---MDKXXXXXXXXXXXXXXXXGKHNKPDAK-KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEK 868 T S + + K +KLR K KKT SK S P+ K KK RVWD +S + LD + P NI E + + +D + K K G S F+ I G + ADL+PAL+ ++D L++KNVA EIA KLC+SVAASL+GK++ +F I+S V+ A+ E+LVRIL+P+R IDI+RD +K +PY KSTNLAK+ +WL+++ +V++AACDTFR+GAVEQLRTH R L V ++EKGY K Sbjct: 177 TGSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE---KAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGK 473
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_DICDI (Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum GN=srpr PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.912e-42 Identity = 116/310 (37.42%), Postives = 156/310 (50.32%), Query Frame = 2 Query: 2 ESRVTGVANGKENTSSNIGAFDV-----SKLQKLRNKGGKKTDTVVSKGSNPDPKKKIT------------KKNRVWDDSPPESK----LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK 868 E R AN + SS+ + D S ++ N K T V++ N KKK+ KK R W+D K L+ +D NG+ I E MD ++ +AK F F + G +DK DLEP L K L KNVA ++A+K+ +S+ LEGKKLA+F ++S+V+ ME+ + RILTP+R+IDILR+V A K +R PY KSTNLAKV YWL + M+AACDTFRSGA+EQL+THA RL V +FE+GY K Sbjct: 179 ERRKQNKANNINDISSDDDSDDSDSSSGSDSEENSNGATKNQQTDVARIENSGYKKKVKDTPDKQASSSTGKKARTWEDGKLSKKELEALNRSD--NSNGTEIVREKIQKFNIDMD-------------VSSSDDDDEEEAKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVKGKR-PYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSK 472
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_MOUSE (Signal recognition particle receptor subunit alpha OS=Mus musculus GN=Srpr PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.720e-41 Identity = 109/304 (35.86%), Postives = 162/304 (53.29%), Query Frame = 2 Query: 14 TGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEK 868 +G++ G EN + K ++ K GK D + PK+K K RVW+ +K LD++ P NG+ + D G ++ KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY K Sbjct: 192 SGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGGQLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGK 494
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_BOVIN (Signal recognition particle receptor subunit alpha OS=Bos taurus GN=SRPR PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.439e-40 Identity = 102/273 (37.36%), Postives = 144/273 (52.75%), Query Frame = 2 Query: 125 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE-------VEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEK 868 SK S D PK+K K RVW S + LD++ P + G + D KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY K Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEAAPPEDINLIRGTGPGRQLQDLDCSSSDDEGAAQ-----NSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGK 497
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_HUMAN (Signal recognition particle receptor subunit alpha OS=Homo sapiens GN=SRPR PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 2.103e-39 Identity = 104/298 (34.90%), Postives = 154/298 (51.68%), Query Frame = 2 Query: 74 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAG----------------GNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEK 868 K ++ K G+ + + PK+K K RVW+ +K LD++ P G GS +++ D S KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY K Sbjct: 213 KREEFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSEDINLIRGTGSGGQLQDLDCSSS--------------DDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGK 496
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_CANFA (Signal recognition particle receptor subunit alpha OS=Canis familiaris GN=SRPR PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 7.991e-39 Identity = 103/304 (33.88%), Postives = 157/304 (51.64%), Query Frame = 2 Query: 74 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVW----------------------DDSPPE--SKLDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEK 868 K ++ K G+ + + PK+K K RVW D +PPE + + T P GG +++ ++D E+ + +KP A K G M + + G +L + D+E L ++D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVE +RTH RRL V +FEKGY K Sbjct: 213 KREEFIQKHGRGLEKSSKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTTNGAPDAAPPEDINLIRGTGP-GGQLQDLDCSSSDDEETAQNA-------------------SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGK 496
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_SCHPO (Signal recognition particle receptor subunit alpha homolog OS=Schizosaccharomyces pombe GN=srp101 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.252e-32 Identity = 89/270 (32.96%), Postives = 130/270 (48.15%), Query Frame = 2 Query: 89 RNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK---LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAA-KEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEK 868 +N+ K SK +N K K K+ R WDD E + L+++ A ++ +K + K S+F ++ G L + DL P LK +++ L KNVA IA +LCESV ASL KK+ SF + + V A + L +ILTP S+D+L + + K + +PY KST LAK+AYWLL + +++AACDTFRSGA+EQL H + LQ + +F +GY K Sbjct: 146 KNEYEMKKKGAQSKQTNAPKKGK--KQLRKWDDQITEEEQAALNYSSQASSASQTVDNSQLSSIVGNNNKFQKTGSGDVIISDLEMDPNQTISNKSASSAFSLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTVKNTVNKAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSNNFRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGK 413
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: SRPR_YEAST (Signal recognition particle receptor subunit alpha homolog OS=Saccharomyces cerevisiae GN=SRP101 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.044e-30 Identity = 84/268 (31.34%), Postives = 141/268 (52.61%), Query Frame = 2 Query: 80 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNK----PDAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQR------KPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 835 +KLR+ GKK T N +K + + D+ E +KLDF+ N S + +++ + +S D+ ++ +AK +G+ S+ F + + G ++++DL+ L+ L +L+TKNVA E A+ L + V+ L G K A++T + + + ++ +AL +ILTP S+D+LR++ + + ++ PY KSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVALDSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGNEAKNSGYVSTAFGFLQKHVLGNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENL 451
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: Y291_METJA (Probable signal recognition particle protein MJ0291 OS=Methanocaldococcus jannaschii GN=MJ0291 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15 Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 428 DLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE 853 D+E L+ L+ L+ +VA E+ EKL E++ L G+K++ + I A++ A+ IL+ + IDI + K + KP K+T +AK+AY L Q SV++AA DTFR+GA+EQL HA+ + V + + Sbjct: 122 DIEDVLEELEIALLEADVALEVVEKLIENIKNELVGRKISPDDNVEEITINAVKNAIKNILSQEK-IDIEEIIKKNKAEGKPTVIVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIK 262
BLAST of FC917867 vs. ExPASy Swiss-Prot
Match: DOCK_SULAC (Probable signal recognition particle protein OS=Sulfolobus acidocaldarius GN=dpa PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15 Identity = 50/175 (28.57%), Postives = 94/175 (53.71%), Query Frame = 2 Query: 338 GKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 862 G+ NK + K+ S F + K + + DL ++ L+ +L+ +V+ E+ EK+ E + +L GKK++ + IV +++++ ILT + D++ + ++ +KP+ K+T +AKV L ++ +S ++AA DTFR+ A EQL HA +L+V + Y Sbjct: 70 GQENKQENKR-----SFFDFLKYKT-IKEDDLNDVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSG--KKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKY 236 The following BLAST results are available for this feature:
BLAST of FC917867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917867 ID=FC917867; Name=FC917867; organism=Citrus clementina; type=EST; length=870bpback to top |