FC917870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917870 vs. ExPASy Swiss-Prot
Match: MTG1_MOUSE (Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21 Identity = 70/215 (32.56%), Postives = 114/215 (53.02%), Query Frame = 2 Query: 5 WYGPHMAAATRAILYRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHVRNLRKSDYDASCDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIASHPNIYVLDTPGILPPEIHDVEVCSQLALTGAIGDSFLG 634 W+ HMA + + + VD ++EV DARIPFS F +L P +LVLNKMDLA T+ ++ + +++ + + KD N+K+ + + +R + + A +M++G+PNVGKS+L NSL + T + A V +PG T+ + S +++ P +++LDTPG+L P I VE +LAL G + D +G Sbjct: 29 WFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQELLGLKP-----HLLVLNKMDLADLTEQQKIVQRLEEKGLSNVLFTNCVKDENIKQIVPKVMELIRCSYRY-HRAETPEYCIMVVGVPNVGKSSLINSLRRQHLRTG------KAARVGGEPGITRAVTSRIQVCERPLVFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVG 231
BLAST of FC917870 vs. ExPASy Swiss-Prot
Match: RBGA_BACSU (Ribosome biogenesis GTPase A OS=Bacillus subtilis GN=rbgA PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 69/213 (32.39%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 5 WYGPHMAAATRAILYRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL----KFLQAHVRNLRKSDYDASCDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDVEVCSQLALTGAIGDSFL 631 W+ HMA A R + ++ L+DI+ E+ DARIP SS + + + RI++LNK D A ++W F+ Q S +NS N + + + + LQ +R + +++GIPNVGKS L N L K A +PG T +K+ + +LDTPGIL P+ D V +LA+TGAI DS + Sbjct: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIED--ILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR--AIRALIIGIPNVGKSTLINRL-----------AKKNIAKTGDRPGITTSQQWVKVGK--ELELLDTPGILWPKFEDELVGLRLAVTGAIKDSII 200
BLAST of FC917870 vs. ExPASy Swiss-Prot
Match: MTG1_HUMAN (Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 71/215 (33.02%), Postives = 112/215 (52.09%), Query Frame = 2 Query: 5 WYGPHMAAATRAILYRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHVRNLRKSDYDASCDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIASHPNIYVLDTPGILPPEIHDVEVCSQLALTGAIGDSFLG 634 W+ HMA + + + LVD I+EV DARIP S F + P +LVLNKMDLA T+ ++ + + + + + KD NVK+ + + + + + + +M++G+PNVGKS+L NSL R KGK V +PG T+ + S ++++ P +++LDTPG+L P I VE +LAL G + D +G Sbjct: 30 WFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKP-----HLLVLNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLE-YCIMVIGVPNVGKSSLINSL----RRQHLRKGKATR--VGGEPGITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVG 232
BLAST of FC917870 vs. ExPASy Swiss-Prot
Match: MTG1_BOVIN (Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 72/218 (33.03%), Postives = 112/218 (51.38%), Query Frame = 2 Query: 5 WYGPHMAAATRAILYRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHVRN---LRKSDYDASCDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIASHPNIYVLDTPGILPPEIHDVEVCSQLALTGAIGDSFLG 634 W+ HMA + + + LVD I+EV DA+IP S F + P +LVLNKMDLA + ++ I +++ + KD NVK+ + + V + + ++ C +M++G+PNVGKS+L NSL R KGK V +PG T+ + S +++ P +++LDTPG+L P I VE +LAL G + D +G Sbjct: 30 WFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKP-----HLLVLNKMDLADLKEQQKIIQHLEREGIKHVVFTNCVKDENVKQVIPTVTELVGSSYRYHRGEHVEYC----IMVIGVPNVGKSSLINSL----RRQHLRKGKATR--VGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSVETGLKLALCGTVLDHLVG 232
BLAST of FC917870 vs. ExPASy Swiss-Prot
Match: MTG1_SCHPO (Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe GN=mtg1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13 Identity = 68/225 (30.22%), Postives = 102/225 (45.33%), Query Frame = 2 Query: 5 WYGPHMAAATRAILYRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSH---NKDNVKEFLKFLQAHV-----------RNLRKSDYDASCD-TVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSL-KIASHPNIYVLDTPGILPPEIHDVEVCSQLALTGAIGDSFL 631 WY HM + + DI +EVRDARIP +S + + + RI+V NK DLA K ++ QN N + + E F+ +V R +R AS + V V +G+PN GKS++ NSL + A K K A V PG TK I + ++ + ++Y+LDTPGI+ P I E +L+L G + + + Sbjct: 17 WYPGHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDF--LNKKNRIIVYNKCDLADTFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIRTLVDQASANGRVYVYFVGMPNTGKSSILNSLRNV----ALRKSK--SAIVGNYPGVTKRISEIVRLFNDMDVYMLDTPGIMTPSITKPEDMLKLSLVGCVKEGIV 233 The following BLAST results are available for this feature:
BLAST of FC917870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917870 ID=FC917870; Name=FC917870; organism=Citrus clementina; type=EST; length=713bpback to top |