FC917878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917878 vs. ExPASy Swiss-Prot
Match: AEEP_BACSU (L-Ala-D/L-Glu epimerase OS=Bacillus subtilis GN=ykfB PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22 Identity = 75/194 (38.66%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 249 RAENRPLNVPLIAPFTIATSRLDQVENVAIRIELSNGCVGWGEAPVLPHVTAEDQQTAMVKASEACEVLKESPAMALGSVFGVVAGLLP-GHQFASQLKVRAAVEMALIDAVAKSVSMPLWRLFGGVSNTITTDITIPIVSPAEAAELASKYRKQGFTTLKLKVGK-NLKEDIEVLRAIR-AVHPDSSFILDAN 821 R E + VPL PF A + E+V +RI +G VGWGEAP +T + + S VLK PA+ S+ G A L H + +AAVEMAL D A+ +PL+++ GG +T+ TD T+ + SP E A A Y KQGF TLK+KVGK ++ DI ++ IR V LDAN Sbjct: 5 RIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPTLVITGDSMDSI---ESAIHHVLK--PALLGKSLAGYEAILHDIQHLLTGNMSAKAAVEMALYDGWAQMCGLPLYQMLGGYRDTLETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDAN 193
BLAST of FC917878 vs. ExPASy Swiss-Prot
Match: AEEP_CLOAB (L-Ala-D/L-Glu epimerase OS=Clostridium acetobutylicum GN=CA_C0192 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16 Identity = 60/186 (32.26%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 267 LNVPLIAPFTIATSRLDQVENVAIRIELSNGCVGWGEAPVLPHVTAEDQQTAMVKASEACEVLKESPAMALGSVFGVVAGLLPGHQFASQLKVRAAVEMALIDAVAKSVSMPLWRLFGGVSNTITTDITIPIVSPAEAAELASKYRKQGFTTLKLKVGKNLKEDIEVLRAIR-AVHPDSSFILDAN 821 L+VPL PF A ++ V +V ++I G VG+G A VT + T ++ + + + M + ++ L + +AAV++AL D + PL++L GG N + TDITI + SP E + + K G+ TLK+KVGKN K DI+ +R IR A+ + + +DAN Sbjct: 11 LSVPLKKPFKTAVRSVNSVNDVVVKIITDTGNVGFGSAASTGLVTGDI--TESIEGAINNYIKRSIVGMDIEDFEAILIKL--DNCIVGNTSAKAAVDIALYDLYGQRYGAPLYKLLGGFRNKLETDITISVNSPEEMSRDSVDAVKLGYKTLKIKVGKNPKLDIKRMREIRKAIGYEVNLRIDAN 192
BLAST of FC917878 vs. ExPASy Swiss-Prot
Match: AEEP_THEMA (L-Ala-D/L-Glu epimerase OS=Thermotoga maritima GN=TM_0006 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14 Identity = 55/178 (30.90%), Postives = 88/178 (49.44%), Query Frame = 3 Query: 288 PFTIATSRLDQVENVAIRIELSNGCVGWGEAPVLPHVTAEDQQTAMVKASEACEVLKESPAMALGSVFGVVAGLLPGHQFASQLKVRAAVEMALIDAVAKSVSMPLWRLFGGVSNTITTDITIPIVSPAEAAELASKYRKQGFTTLKLKVGKNLKEDIEVLRAIRAVHPDSSFILDAN 821 PF I S + NV + I L +G G+GEA V E + + + E++ +F + L F S ++AAV+ A +DA+++ + + L GG + I TD T+ I + + A K ++GF +K+KVG+NLKEDIE + I V + +I+DAN Sbjct: 19 PFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVREMITGIDVRNYARIFEITDRLFG---FPS---LKAAVQFATLDALSQELGTQVCYLLGGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDAN 190 The following BLAST results are available for this feature:
BLAST of FC917878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917878 ID=FC917878; Name=FC917878; organism=Citrus clementina; type=EST; length=822bpback to top |