FC917879

Overview
NameFC917879
Unique NameFC917879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length855
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12030 contig Ccv1_Contig12030:4..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: EP1G_DAUCA (Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.647e-89
Identity = 165/268 (61.57%), Postives = 200/268 (74.63%), Query Frame = 3
Query:   78 VPANETFKFVNEGEFGPYINEYDANYRMISIFNSPFQVGFYNTTPNAYTLALRLGVQRNEPNYRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTANKGVVGFKLLPNGNMVLRDAKSNFIWQSFDYPTDTLLVGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPRPVVYFTFPV-----QFSGLKNVTFNSAPETDEAFAYQLTL----DSSSGGGLILARPKYNATISFLRLGVDGNLKIYTY 854
            VPANETFKFVNEGE G YI+EY  +YR +  F SPFQ+ FYN TP A+TLALR+G++R E   RWVWEANRG PV ENAT + G DGNLVLA ++G V WQ++TANKGVVG K+LPNGNMVL D+K  F+WQSFD PTDTLLVGQSL++G VTKLVSR S  ENV+GPYS VME   L LYYK + +P+P+ Y++F +     +   L+NVTF    E D+ FA+ L+L     +S GG  IL R KYN T+SFLRL +DGN+KIYTY
Sbjct:   26 VPANETFKFVNEGELGQYISEYFGDYRPLDPFTSPFQLCFYNQTPTAFTLALRMGLRRTESLMRWVWEANRGNPVDENATLTFGPDGNLVLARSNGQVAWQTSTANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQSLKMGAVTKLVSRASPGENVNGPYSLVMEPKGLHLYYKPTTSPKPIRYYSFSLFTKLNKNESLQNVTFEFENENDQGFAFLLSLKYGTSNSLGGASILNRIKYNTTLSFLRLEIDGNVKIYTY 293          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17
Identity = 62/166 (37.35%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  183 FQVGFYNTTPNAYTLALRLGVQRNEPNYR-WVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPR 644
            F++GF+ TT ++      LG+   +  YR +VW ANR  P+  +      +  NLVL +     VW +N      +  V  +LL NGN V+RD+ SN    F+WQSFDYPTDTLL    +G  L+ G    L S  S  +   G YS+ +E  RL  +Y SS + R
Sbjct:   56 FELGFFKTTSSSRWY---LGIWYKKFPYRTYVWVANRDNPLSNDIGTLKISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEFYLSSGSFR 218          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.429e-16
Identity = 71/203 (34.98%), Postives = 103/203 (50.74%), Query Frame = 3
Query:  177 SPFQVGFYNTTPNAYTLALRLGVQRNEPNYR-WVWEANRGKPVRENATFSLGTDGN-LVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPRPVVYFTFPVQFSGLKN-VTFNSAPETDEAFAYQL 743
            S F+VGF+ T    Y     LG+   + + R +VW ANR  P+  NA  +L   GN LVL +     VW +N      +  V  +LL NGN V+RD+ +N    ++WQSFDYPTDTLL    +G +L+ G    L S  S  +   G +S+ +E+  L  +Y S           FP+  SG  N + F+  PE D+  +Y +
Sbjct:   55 SIFEVGFFRTNSRWY-----LGMWYKKVSDRTYVWVANRDNPL-SNAIGTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRE--------NFPMHRSGPWNGIRFSGIPE-DQKLSYMV 242          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14
Identity = 79/251 (31.47%), Postives = 120/251 (47.81%), Query Frame = 3
Query:  147 ANYRMISIFNSPFQVGFYNTTPNAYTLALRLGVQRNEPNYR-WVWEANRGKPVRENATFSLGTDGN-LVLAEADGTVVWQSNTANKGV---VGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPRPVVYFTFPVQFSGLKN-VTFNSAPETDEAFAYQL-TLDSSSGGGLILARPKYNATISFLRLGVDGNLKIYTY 854
            +N  ++S  N+ F++GF+ T  ++      LG+   +   R +VW ANR  P+  NA  +L   GN LVL       VW +N         V  +LL NGN V+RD+ +N    ++WQSFDYPTDTLL    +G  L+ G    L S  S  +   G +S+ +E+  L  +Y        + +  FP+  SG  N V F+  PE D+  +Y +     +S       R   N+  S L L  +G  +  T+
Sbjct:   45 SNRTLVSPGNN-FELGFFRTNSSSRWY---LGIWYKKLLDRTYVWVANRDNPL-SNAIGTLKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEFY--------LWHGIFPMHRSGPWNGVRFSGIPE-DQKLSYMVYNFTENSEEVAYTFRMTNNSIYSRLTLSSEGYFQRLTW 281          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14
Identity = 67/230 (29.13%), Postives = 106/230 (46.09%), Query Frame = 3
Query:  183 FQVGFYNTTPNAYTLALRLGVQRNEP--NYRWVWEANRGKPVR-ENATFSLGTDGNLVLAEADGTVVWQSNTAN-KGVVGFKLLPNGNMVLRDAKSNFIWQSFDYPTDTLLVGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPR-PVVYFTFPVQ--FSGLKNVTFNSAPETDEAFAYQLTLDSSSGGGLILARPKYNATISFLRLGVDGNLKIYT 851
            F  GFY    +A+T ++           N   VW AN  +PV    +  +L  DGN+VL + DG  VW+++  N  GV   +LL  GN+V+ D+  N +WQSFD PTDT L  Q   +   T+LV     +     P +++   + LS+     + P+   +Y+  P Q  +   +N  +NS        +  L     + G  ++A          L L  DGNL++Y+
Sbjct:   55 FSSGFYEVYTHAFTFSVWYSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQ--LITAATRLVPTTQSR----SPGNYIFRFSDLSVLSLIYHVPQVSDIYWPDPDQNLYQDGRN-QYNSTRLGMLTDSGVLASSDFADGQALVASDVGPGVKRRLTLDPDGNLRLYS 277          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 70/216 (32.41%), Postives = 106/216 (49.07%), Query Frame = 3
Query:  147 ANYRMISIFNSPFQVGFYNTTPNAYTLALRLGVQRNEPNYR-WVWEANRGKPVRENATFSLGT----DGNLVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPRPVVYFTFPVQFSGLKN-VTFNSAPETDEAFAYQL 743
            +N R +    +  ++GF+ T  ++      LG+   + + R +VW ANR  P+    + S+GT    + NLVL +     +W +N      +  V  +LL NGN VLRD+  N    F+WQSFDYPTDTLL    +G  LR G    L S  S  +   G +S+ +++ RL  +Y   +         F V  SG  N V F+  PE D+  +Y +
Sbjct:   43 SNSRTLVSPGNVLELGFFRTPSSSRWY---LGMWYKKLSERTYVWVANRDNPL----SCSIGTLKISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEFYLFKD--------DFLVHRSGPWNGVGFSGMPE-DQKLSYMV 242          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13
Identity = 62/211 (29.38%), Postives = 103/211 (48.82%), Query Frame = 3
Query:  183 FQVGFYNTTPNAYTLALRLGVQRNEPNYR-WVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTAN---KGVVGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTKLVSRLSIKENVDGPYSFVMESNRLSLYYKSSNAPRPVVYFTFP---VQFSGL---KNVTFNSAPETDEAFAYQLTLDSSS 761
            F++GF+ T  ++      LG+   + + R +VW ANR  P+  +      +  N    +     VW +N      +  V   +L NGN V+RD+ +N    F+WQSFD+PTDTLL    +   L+ G    L SR S  +   G +S+ +E  RL  +Y SS     ++Y + P   ++FSGL   + +++      D   AY+  + ++S
Sbjct:   53 FELGFFRTNSSSRWY---LGIWYKKVSDRTYVWVANRDNPLSSSIGTLKISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEFYLSSGV--FLLYRSGPWNGIRFSGLPDDQKLSYLVYISQDMRVAYKFRMTNNS 258          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.629e-12
Identity = 70/218 (32.11%), Postives = 111/218 (50.92%), Query Frame = 3
Query:  183 FQVGFYNTTPNAY---TLALRLGV--QRNEPNYRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTANKG--VVGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTK--LVSRLSIKENVDGPYSFVMESNR-LSLYYKSSNAPRPVVYFTFP---VQFSG---LKNVTF--NSAPETDEAFAYQLTLDSS 758
            F++GF+ TT       T    LG+  +    +  +VW ANR   +  +      +  +LVL +   T VW +N        V  +LL NGN VLRD+K+N    F+WQSFDYP DTLL    +G++L +G   +  L S  S  +   G +SF++E+   L  +Y   N  +  VY T P   V+F+G   ++N ++  NS  + +E  AY   ++++
Sbjct:   53 FELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMKLGRNL-IGSENEKILTSWKSPTDPSSGDFSFILETEGFLHEFYLLKNEFK--VYRTGPWNGVRFNGIPKMQNWSYIDNSFIDNNEEVAYSFQVNNN 267          
BLAST of FC917879 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 69/217 (31.80%), Postives = 109/217 (50.23%), Query Frame = 3
Query:  183 FQVGFYNTTPNAY---TLALRLGV--QRNEPNYRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQSNTANKG--VVGFKLLPNGNMVLRDAKSN----FIWQSFDYPTDTLL----VGQSLRVGGVTK-LVSRLSIKENVDGPYSFVMESNR-LSLYYKSSNAPRPVVYFTFP---VQFSG---LKNVTF--NSAPETDEAFAYQLTLDSS 758
            F++GF+ TT       T    LG+  +    +  +VW ANR   +  +      +  +LVL +   T VW +N        V  +LL NGN VLRD+K+     F+WQSFDYP DTLL    +G++    G  K L S  S  +   G YSF++E+   L  +Y  +N  +  VY T P   V+F+G   ++N ++  NS  + ++  AY   ++++
Sbjct:   53 FELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETEGFLHEFYLLNNEFK--VYRTGPWNGVRFNGIPKMQNWSYIDNSFIDNNKEVAYSFQVNNN 267          
The following BLAST results are available for this feature:
BLAST of FC917879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
EP1G_DAUCA1.647e-8961.57Epidermis-specific secreted glycoprotein EP1 OS=Da... [more]
SLSG3_BRAOL2.197e-1737.35S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SRK6_BRAOE2.429e-1634.98Putative serine/threonine-protein kinase receptor ... [more]
SLSG6_BRAOL5.065e-1431.47S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
KPRO_MAIZE5.065e-1429.13Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
SLSG2_BRAOA1.474e-1332.41S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG4_BRAOL9.552e-1329.38S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
SLSG0_BRAOA1.629e-1232.11S-locus-specific glycoprotein OS=Brassica oleracea... [more]
SLSG1_BRAOA2.779e-1231.80S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA49BD11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BD11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917879 ID=FC917879; Name=FC917879; organism=Citrus clementina; type=EST; length=855bp
ACAAAATGTCATCTTCTTCAGCAATATTCTCCCTCTTGTTCTACTTCTCA
CTCATTTTCTCCATTGCTAGCGCCCAAGTTCCTGCCAACGAAACATTCAA
GTTTGTGAATGAAGGAGAATTTGGTCCATACATTAATGAATACGATGCAA
ATTACAGAATGATAAGCATCTTCAATTCCCCATTCCAGGTTGGCTTTTAC
AACACAACACCAAATGCTTACACCCTTGCTCTCCGCTTGGGCGTGCAGCG
AAACGAACCAAATTACCGCTGGGTCTGGGAAGCAAACCGGGGCAAACCGG
TTCGCGAAAACGCCACCTTTTCTTTGGGAACCGACGGAAACCTTGTCTTG
GCCGAGGCGGACGGCACTGTCGTCTGGCAATCCAACACAGCCAACAAAGG
TGTTGTAGGGTTCAAGTTGCTTCCAAATGGCAACATGGTGCTTCGTGACG
CAAAGAGCAACTTTATCTGGCAGAGTTTTGATTATCCGACTGATACTCTC
TTGGTGGGCCAGTCTCTTCGCGTCGGTGGGGTCACCAAGCTCGTAAGCAG
ACTTTCCATTAAAGAAAACGTCGACGGCCCTTACAGCTTTGTAATGGAGT
CTAATAGATTGTCACTCTATTACAAAAGCAGCAATGCTCCCCGACCTGTT
GTTTACTTCACTTTCCCTGTTCAGTTTAGTGGCTTAAAGAATGTAACGTT
CAATTCTGCCCCGGAAACTGATGAAGCTTTCGCTTATCAACTGACTCTAG
ATTCTTCATCCGGGGGCGGTCTTATTTTGGCAAGGCCAAAGTACAACGCC
ACTATATCGTTCCTCCGGCTAGGAGTAGATGGAAACCTCAAGATCTACAC
TTACT
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