FC917880

Overview
NameFC917880
Unique NameFC917880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length895
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14668 contig Ccv1_Contig14668:206..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917880 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 7.429e-120
Identity = 208/254 (81.89%), Postives = 228/254 (89.76%), Query Frame = 2
Query:  134 GRVASVYSELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLVPNGADAVRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMG 895
            GR ASVYSE+Q+SRI+H LPLPSVL +PFKIV GP SSAAGNPDEIAKLFPNLFGQPSA+LVP+ AD++ S+++LKIG+VLSGGQAPGGHNVISGI+DYLQDRAKGS+LYGFRGGPAGIMKC YV+LT+DYI+PYRNQGGFDMICSGRDKIETPEQFKQA ETA               SNTNACLLAE+FRSKNLKT V+GCPKTIDGDLKCKEVP SFGFDTACKIY+EMIGNVMIDARSTGKYYHFVRLMG
Sbjct:    7 GRAASVYSEVQSSRIEHVLPLPSVLNHPFKIVQGPPSSAAGNPDEIAKLFPNLFGQPSAMLVPDVADSLDSNQQLKIGLVLSGGQAPGGHNVISGIFDYLQDRAKGSILYGFRGGPAGIMKCNYVQLTADYIHPYRNQGGFDMICSGRDKIETPEQFKQAEETAGKLDLNGLVVIGGDDSNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFVRLMG 260          
BLAST of FC917880 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 7.706e-109
Identity = 193/253 (76.28%), Postives = 213/253 (84.19%), Query Frame = 2
Query:  137 RVASVYSELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLVPNGADAVRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMG 895
            R A+VYSE+Q SR+DH LPLPSVL +PFK+VDGP SSAAG+P+EIAKLFP+L+GQP   LVP+ +  V  ++ LKIGVVLSGGQAPGGHNVISGI+DYLQ   KGS +YGFRGGPAG+MK KYV LT ++IYPYRNQGGFDMICSGRDKIETPEQFKQA ETA               SNTNACLLAE+FRSKNLKT V+GCPKTIDGDLK KEVP SFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMG
Sbjct:    8 RYAAVYSEVQNSRLDHPLPLPSVLGSPFKVVDGPPSSAAGHPEEIAKLFPSLYGQPHVSLVPDDSGDVAMNQILKIGVVLSGGQAPGGHNVISGIFDYLQTHCKGSTMYGFRGGPAGVMKGKYVVLTPEFIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMG 260          
BLAST of FC917880 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.773e-39
Identity = 96/256 (37.50%), Postives = 139/256 (54.30%), Query Frame = 2
Query:  155 SELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNP---DEIAKLFPNLFGQPSALL------VPNGADAVRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMG 895
            S+LQ  R  +   LP  L+     V+   ++ A +P     I + FP+ +GQP A        VP+ A  +     +++GV+  G Q+PGGHNVI G++D L+     ++L GF GG  G+   K +E+T D +  Y+NQGG+DM+   +D+I T EQ   A                   SNT+A  LAE F      T V+G P T++GDLK + V A+ GFDT CK+ +++I NV  DA S  KYY+F+RLMG
Sbjct:   12 SDLQKLRSHYHPELPPCLQGTTVRVELRDATTAADPAGEHTIKRFFPHTYGQPLAHFLRATAKVPD-AQIITEHPAIRVGVLFCGRQSPGGHNVIWGLHDALKVHNPKNILLGFLGGSEGLFAQKTLEITDDVLATYKNQGGYDMLGRTKDQIRTTEQVNAAMAACKALKLDGLVIIGGVTSNTDAAHLAEKFAETKCLTKVVGVPVTLNGDLKNQFVEANVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMG 266          
BLAST of FC917880 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.098e-38
Identity = 94/255 (36.86%), Postives = 138/255 (54.12%), Query Frame = 2
Query:  155 SELQTSRIDHALPLPSVLKNP---FKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLV---PNGADA--VRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMG 895
            S+LQ  R  +   LP  L+      ++ DG  + +      I++ FP+ +GQP A  +      ADA  +     +++GVV  G Q+PGGHNV+ G+++ L+     S L GF GG  G+   K +E+T D +  Y+NQGG+D++   +D+I T EQ   A  T                SNT+A  LAE F      T V+G P T++GDLK + V  + GFDT CK+ +++I NV  DA S  KYY+F+RLMG
Sbjct:   12 SDLQKLRSLYKPELPPCLQGTTVRVELGDGTTACSEAGAHTISRSFPHTYGQPLAHFLRATAKVADAHIISEHPAMRVGVVFCGRQSPGGHNVVWGLHNALKIHNPNSTLLGFLGGSEGLFAQKTLEVTDDILSTYKNQGGYDLLGRTKDQIRTTEQVHAALTTCKNLKLDGLVIIGGVTSNTDAAQLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMG 266          
The following BLAST results are available for this feature:
BLAST of FC917880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PFPB_RICCO7.429e-12081.89Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU7.706e-10976.28Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU3.773e-3937.50Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_RICCO1.098e-3836.86Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA22DF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917880 ID=FC917880; Name=FC917880; organism=Citrus clementina; type=EST; length=895bp
CTTCTATGCTCACCGTCACAGTAACACTCCCTACTAGACACAGTTTGGTA
ATAAACTCGATAGATTAGAAACAATGTCTCCGTCCTTGGTGGCAAACGCC
GACCTCAGTCCCGTCACGTCCGGTACCGTTAAGGGACGCGTGGCTTCAGT
TTATAGCGAACTCCAAACGAGTCGAATCGATCACGCACTCCCTCTCCCTT
CTGTTCTCAAAAACCCTTTCAAAATCGTCGATGGCCCCGCTAGCTCCGCC
GCCGGCAATCCAGATGAGATTGCGAAATTGTTTCCAAATCTGTTCGGGCA
ACCGTCCGCATTGTTGGTGCCGAACGGTGCTGACGCGGTGCGATCTGATG
AGAAGTTGAAAATCGGCGTCGTCTTGTCTGGAGGTCAGGCGCCAGGTGGA
CACAATGTGATCTCTGGAATCTATGATTACTTGCAGGATCGCGCGAAAGG
GAGTGTACTGTATGGATTCAGAGGAGGTCCAGCTGGAATCATGAAGTGCA
AATACGTTGAACTAACTTCCGATTATATTTATCCCTATAGAAACCAGGGT
GGCTTTGATATGATCTGTAGTGGGAGAGACAAGATCGAAACCCCAGAGCA
GTTTAAACAAGCTACAGAAACAGCAGTGAAGCTTGATTTGGACGGCCTTG
TCGTTATTGGTGGTGATGATTCAAATACAAATGCTTGCCTCCTTGCTGAA
CACTTCAGGAGTAAAAACTTGAAAACTCTTGTTATGGGATGCCCAAAAAC
CATTGATGGTGACTTGAAGTGCAAAGAGGTCCCTGCAAGCTTTGGATTTG
ATACTGCATGCAAGATATATGCAGAAATGATTGGAAATGTCATGATAGAT
GCACGGTCAACTGGAAAATATTACCACTTTGTACGGCTTATGGGG
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