FC917908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917908 vs. ExPASy Swiss-Prot
Match: TBC13_HUMAN (TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16 Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 357 SDLEYELSQKEINLEKLQRIADTGLPDGGGLRATAWKLLLGYLPSCRDLWEKELTENRQKYXXXXXXXXXRPSEITRIKDEVSNYNDQNADNDVDGPLRRQEISQEDHPLSSGKASVWHQYFQHIEIAEQIDRDLQRTHPDMKFF 791 +D + L + I LEKL+ ++ +G+P GGLR WK+LL YLP R W L + R+ Y +P I + VS R++++ EDHPL+ S W+ YF+ E+ QID+D++R PD+ FF Sbjct: 10 ADFQDVLKEPSIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELYAQFLREMIIQPG-IAKANMGVS----------------REDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFF 137
BLAST of FC917908 vs. ExPASy Swiss-Prot
Match: TBC13_MOUSE (TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.623e-14 Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 357 SDLEYELSQKEINLEKLQRIADTGLPDGGGLRATAWKLLLGYLPSCRDLWEKELTENRQKYXXXXXXXXXRPSEITRIKDEVSNYNDQNADNDVDGPLRRQEISQEDHPLSSGKASVWHQYFQHIEIAEQIDRDLQRTHPDMKFF 791 +D + L + I LEKL+ ++ +G+P GGLR WK+LL YLP R W L + R Y +P I + V R++++ EDHPL+ S W+ YF+ E+ QID+D++R PD+ FF Sbjct: 10 ADFQDVLKEPSIVLEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRGLYSQFLREMIIQPG-IAKANMGVF----------------REDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFF 137
BLAST of FC917908 vs. ExPASy Swiss-Prot
Match: YLOH_SCHPO (TBC domain-containing protein C1952.17c OS=Schizosaccharomyces pombe GN=SPAC1952.17c PE=2 SV=4) HSP 1 Score: 75.0998 bits (183), Expect = 5.222e-13 Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 3 Query: 378 SQKEINLEKLQRIADTGLPDGGGLRATAWKLLLGYLPSCRDLWEKELTENRQKYXXXXXXXXXRPSEITRIKDEVSNYNDQNADNDVDGPLRRQEISQEDHPLSSGKASVWHQYFQHIEIAEQIDRDLQRTHPDMKFFSXDAAFSR 815 S++ I+L L + G+PD LRA AW L+L +LP+ R W+ L ++R+ Y P + +E DHPL++ S W +YF +I EQID+D++RT PD+ FF + ++ Sbjct: 16 SEEPISLPGLCSLCIQGIPDEYSLRAKAWMLMLEFLPTDRSNWQSVLEKHRKTYTSFVQELLIDPWRKLTLHEESG--------------------ENSDHPLNTSDDSKWKEYFDDNQILEQIDKDIRRTLPDLSFFQGKSEINK 141 The following BLAST results are available for this feature:
BLAST of FC917908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917908 ID=FC917908; Name=FC917908; organism=Citrus clementina; type=EST; length=817bpback to top |