FC917914

Overview
NameFC917914
Unique NameFC917914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC917914_ssr764 microsatellite FC917914_ssr764:764..775. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3144 contig Ccv1_Contig3144:1..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6B7_HELAM (Cytochrome P450 6B7 OS=Helicoverpa armigera GN=CYP6B7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 64/161 (39.75%), Postives = 94/161 (58.39%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKH--SYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKR 485
            D K+ YD V+E+KYL   F E +RM+  +  L R+  + Y  PGTDV I++  +V I    I  DP+Y+  P QF P+RF  DA +   +H  +YLPFG G R CIG R G +QSL  +  +L  + +EPS ++ R    +PR  +T   +GG+ + +V R
Sbjct:  343 DGKVTYDTVKEMKYLNKVFDETLRMYSIVEPLQRKATRDYQIPGTDVVIEKDTMVLISPRGIHYDPKYYDNPKQFNPDRF--DAEEVGKRHPCAYLPFGLGQRNCIGMRFGRLQSLLCITKILSKFRIEPSKNTDRNLQVEPR-RVTIGPKGGIRVNIVPR 500          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6B1_PAPPO (Cytochrome P450 6B1 OS=Papilio polyxenes GN=CYP6B1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25
Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 3
Query:    3 KYDNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKR 485
            ++D  + Y+ + E+ YL   F E +R +P   F  R     Y FPGTD+TI +G  + +    IQ DP+Y+P P++F PERF  +  KD    +YLPF  GPR C+G R    QS   +  +L  Y VEPS  S      DP        +GG+ + LV+R
Sbjct:  339 RHDGNITYECLSEMTYLSKVFDETLRKYPVADFTQRNAKTDYVFPGTDITIKKGQTIIVSTWGIQNDPKYYPNPEKFDPERFNPENVKDRHPCAYLPFSAGPRNCLGMRFAKWQSEVCIMKVLSKYRVEPSMKSSGPFKFDPMRLFALP-KGGIYVNLVRR 498          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP9E2_BLAGE (Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9E2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.757e-25
Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFP-GTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKR 485
            D KL Y+A+  +KYL+    E +R++P   F  R+CVK Y  P     T++ G  V IP++AI  DP+Y+P P++F PERF  +   +I   +YLPFG GPR CIG R  LM+S   +  LL  + ++   S    P+   +      + GG  L L +R
Sbjct:  372 DGKLTYEAIHSMKYLDMVVSESLRLYPPAIFTDRKCVKNYRLPMEPSYTLEPGDAVWIPIYAIHHDPKYYPNPEKFDPERFSDENKDNIKPFTYLPFGSGPRNCIGNRFALMESKIALVHLLCRFNLK-VVSKTPIPIKITKKGFNMTVDGGFWLGLEER 530          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6B2_HELAM (Cytochrome P450 6B2 OS=Helicoverpa armigera GN=CYP6B2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 3
Query:   15 KLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKR 485
            K+ YD V+++KYL   F E +RM+  +  L R+ ++ Y  PGTDV I++  +V I    I  DP+Y+  P QF PERF  +        +YLPFG G R CIG R G +QSL  +  LL  + +EPS ++ R    +P   I    +GG+ L +V R
Sbjct:  345 KVTYDTVKDMKYLNKVFDETLRMYSIVEPLQRKAIRDYKLPGTDVVIEKDTVVLISPRGIHYDPKYYDNPKQFNPERFFAEEVGKRHPCAYLPFGLGQRNCIGMRFGRLQSLLCITKLLSKFRLEPSKNTDRNLQVEPYRFII-GPKGGIRLNIVPR 500          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C6A14_DROME (Probable cytochrome P450 6a14 OS=Drosophila melanogaster GN=Cyp6a14 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   15 KLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLY 380
            +L YD + ++ YL+    E +R  P L  L+RE  K Y  P +D+ +D+G+L  IPVH I  DP+ +PEP++F P RF  +  K+    +YLPFGDGPR CIG R G +Q+  G+ +LL+ +
Sbjct:  354 ELNYDVLAQMTYLDQVLSETLRKHPLLPHLIRETTKDYQIPNSDIVLDKGILALIPVHNIHHDPEIYPEPEKFDPSRFDPEEVKNRHPMAYLPFGDGPRNCIGLRFGKIQAKIGLVSLLRRF 475          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6B6_HELAM (Cytochrome P450 6B6 OS=Helicoverpa armigera GN=CYP6B6 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 62/161 (38.51%), Postives = 93/161 (57.76%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKH--SYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKR 485
            D K+ YD V+E+KY+  AF E +RM+  +  L R+  + Y  PGTDV I++  +V I    I  DP+Y+  P QF P+RF  DA +   +H  +YLPFG G R CIG R G +QSL  +  +L  + +EPS ++ R    +P   +    +GG+ + +V R
Sbjct:  343 DGKVTYDTVKEMKYMNKAFDETLRMYSIVEPLQRKATRDYKIPGTDVVIEKDTIVLISPRGIHYDPKYYDNPKQFNPDRF--DAEEVGKRHPCAYLPFGLGQRNCIGMRFGRLQSLLCITKILSKFRIEPSKNTDRNLQVEPHRGLI-GPKGGIRVNVVPR 500          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6D1_MUSDO (Cytochrome P450 6d1 OS=Musca domestica GN=CYP6D1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24
Identity = 51/130 (39.23%), Postives = 82/130 (63.08%), Query Frame = 3
Query:    3 KYDNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEP 392
            K   +L Y+A++++KYL+    E  R +P L FL R+C + +  P T +TI +   + I +  I  DPQYFP+P+ ++PERF  D +KD    +Y+PFG+GPR CI +R+G+M S   +A +L  + ++P
Sbjct:  358 KPQGRLTYEAIQDMKYLDLCVMETTRKYPGLPFLNRKCTQDFQVPDTKLTIPKETGIIISLLGIHRDPQYFPQPEDYRPERF-ADESKDYDPAAYMPFGEGPRHCIAQRMGVMNSKVALAKILANFNIQP 486          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C6A18_DROME (Probable cytochrome P450 6a18 OS=Drosophila melanogaster GN=Cyp6a18 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24
Identity = 57/159 (35.85%), Postives = 92/159 (57.86%), Query Frame = 3
Query:    3 KYDNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTD-VTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKL 476
            ++D K  Y+ +++LKYL+    E +R +  +  + R   K++  PG     I+ G  V IP  AI  DP  +PEP++F+PERF  + +      ++LPFG+GPR CIG R G MQ+  G+A L++ +T  P +++      DP + I   I+GG+ LK+
Sbjct:  346 QHDQKFTYECIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSVIIPSSAIHHDPSIYPEPNEFRPERFSPEESAKRPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNFTFSPCSATPDPLTFDPHSAILLGIKGGIQLKV 504          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQ 374
            + KL YD+V+E+ YL+    E +R +P L  LLR   K+Y  P +++ ++ G  + IPVH+I  DP+ +P+P++F P RF  +  K     +YLPFG+GPR CIGER G +Q   G+  LL+
Sbjct:  333 NQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLR 454          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6D3_MUSDO (Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23
Identity = 51/130 (39.23%), Postives = 80/130 (61.54%), Query Frame = 3
Query:    3 KYDNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEP 392
            K D ++ Y+A++++KYL+   KE  R +P L FL R+C + +  P +  TI +   V I +  +  D +YFPEP  +KPERF  D  KD    +Y+PFG+GPR CI +R+G+M +   +A +L  + +EP
Sbjct:  358 KPDGRITYEAIQDMKYLDLCVKETTRKYPGLPFLNRQCTQDFKVPNSKFTIKKDTNVIISLLGLHRDAKYFPEPLAYKPERF-ADETKDYDAAAYMPFGEGPRHCIAQRMGVMNTKVALAKILANFNIEP 486          
The following BLAST results are available for this feature:
BLAST of FC917914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CP6B7_HELAM1.362e-2539.75Cytochrome P450 6B7 OS=Helicoverpa armigera GN=CYP... [more]
CP6B1_PAPPO3.033e-2537.27Cytochrome P450 6B1 OS=Papilio polyxenes GN=CYP6B1... [more]
CP9E2_BLAGE6.757e-2537.50Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9... [more]
CP6B2_HELAM1.505e-2438.85Cytochrome P450 6B2 OS=Helicoverpa armigera GN=CYP... [more]
C6A14_DROME1.505e-2442.62Probable cytochrome P450 6a14 OS=Drosophila melano... [more]
CP6B6_HELAM1.966e-2438.51Cytochrome P450 6B6 OS=Helicoverpa armigera GN=CYP... [more]
CP6D1_MUSDO2.568e-2439.23Cytochrome P450 6d1 OS=Musca domestica GN=CYP6D1 P... [more]
C6A18_DROME3.353e-2435.85Probable cytochrome P450 6a18 OS=Drosophila melano... [more]
C6A13_DROME1.274e-2341.80Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
CP6D3_MUSDO1.664e-2339.23Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 P... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917914 ID=FC917914; Name=FC917914; organism=Citrus clementina; type=EST; length=885bp
CGAAATACGACAACAAGCTCTGCTACGACGCCGTGCGAGAATTGAAGTAC
CTTGAAGCCGCCTTTAAGGAGGGTATGCGCATGTTCCCTTCGCTCGGGTT
CCTGCTGCGCGAATGCGTCAAGAAGTACACATTCCCGGGCACTGACGTCA
CGATCGACGAGGGCGTGCTGGTGTCCATCCCGGTGCACGCCATACAGACG
GACCCCCAGTACTTCCCTGAGCCGGACCAGTTCAAGCCGGAGCGGTTCCT
CGGGGACGCGGCTAAGGACATCCTGAAGCACTCCTACCTGCCCTTCGGAG
ATGGGCCGAGGGCTTGCATAGGTGAGCGGCTGGGCCTGATGCAGTCGCTG
GCGGGCGTGGCGGCGCTGCTGCAGCTGTACACGGTGGAGCCCTCCGCCAG
CAGCAAGAGGCGGCCGGTCAGTGACCCCAGGGCCACCATCACTCAGAACA
TCCAGGGCGGACTACCCTTGAAACTCGTCAAGAGGCATTGATCCAACGGA
TAGACTGGTGTCATACGAAATTTTTGGACTCAATCCTCGTAATCCATTCC
TACTACCTCCGGTTCTTATAATCAATTCATTTCTATTTTAAGTTTTACCG
ATTGATCATAAACTAGAAATCGCGCGCGGTTTCACCCGCATAGTTCACGT
TTCCGTGGGAATACCGGGACGAAATATAGCCTATAGCCTTCCTCGATAAA
TGGGCTGTGTAACGCTGTAAGATTTTTTCGAATCCGACCAGTAGTTCCTG
AGATTAGCGCGTTCAAACAAACAAACTCTTCAGCTTTATAATATTAGTAT
AGATATACATAGGTGTAGGTACACCTGTATTTTCAATTCCTAAATCTCTT
GGCAAATCAGAATTTACAAATCAATGACAAGCCGG
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