FC917973

Overview
NameFC917973
Unique NameFC917973
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length848
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5659 contig Ccv1_Contig5659:70..917. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO6_ARATH (MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 7.614e-63
Identity = 130/248 (52.42%), Postives = 159/248 (64.11%), Query Frame = 1
Query:  106 MAGASGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVR 846
            MA     ++LEET TWAVAVVCFVL+             G W  KK+K+ALYEALEK+K+ELML+GFISLLLT+   +IS ICIP+++A + HPC    EA                  RR+LL  V +    I R   A    DKC+ KGKV FVS  G+HQLHIFIFVLA+ HV+Y I+T AL +            T+TIEYQ+SHDPERFRFAR+TSFGRRHLS W+K+ + +WIVCFFRQF R
Sbjct:    1 MADQVKEKTLEETSTWAVAVVCFVLLLISIVIEKLIHKIGSWFKKKNKKALYEALEKVKAELMLMGFISLLLTIGQGYISNICIPKNIAASMHPCSASEEARKYGKKDVPKEDEEENL-RRKLLQLVDSL---IPRRSLATKGYDKCAEKGKVAFVSAYGMHQLHIFIFVLAVCHVIYCIVTYALGKTKMRRWKKWEEETKTIEYQYSHDPERFRFARDTSFGRRHLSFWSKSTITLWIVCFFRQFFR 244          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO2_ARATH (MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.449e-61
Identity = 132/247 (53.44%), Postives = 156/247 (63.16%), Query Frame = 1
Query:  106 MAGASGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXR-RRLLAAVAASGGSIRRALAAGSTTDKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQF 840
            MA     R+LEET TWAVAVVCFVL+             G W  KKHK+AL+EALEK+K+ELMLLGFISLLLT+  + IS ICI + VA+T HPC    EA                    RRLL  +A S   I R   A    DKC+ KGKV FVS  G+HQLHIFIFVLA+ HV+Y I+T A  +            T+TIEYQ+S+DPERFRFAR+TSFGRRHL+ W+KT V +WIVCFFRQF
Sbjct:    1 MADQVKERTLEETSTWAVAVVCFVLLFISIVLEHSIHKIGTWFKKKHKQALFEALEKVKAELMLLGFISLLLTIGQTPISNICISQKVASTMHPCSAAEEAKKYGKKDAGKKDDGDGDKPGRRLLLELAES--YIHRRSLATKGYDKCAEKGKVAFVSAYGIHQLHIFIFVLAVVHVVYCIVTYAFGKIKMRTWKSWEEETKTIEYQYSNDPERFRFARDTSFGRRHLNFWSKTRVTLWIVCFFRQF 245          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO12_ARATH (MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 7.127e-61
Identity = 124/239 (51.88%), Postives = 152/239 (63.60%), Query Frame = 1
Query:  127 RSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCS-KGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQF 840
            RSLEETPTWAVAVVCFVL+             G W  KKHK+AL EALEK+K+ELMLLGFISLLL V  + +S+ICIP ++A TWHPC   +E                    R++L    ++     R   A    DKC+ KGKV  VS  G+HQLHIFIFVLA+FHVLY I+T AL +            T+TIEYQ+++DPERFRFAR+TSFGRRHL+ W+K+   +WI CFFRQF
Sbjct:    6 RSLEETPTWAVAVVCFVLLFISIMIEYFLHFIGHWFKKKHKKALSEALEKVKAELMLLGFISLLLVVLQTPVSEICIPRNIAATWHPCSNHQEIAKYGKDYIDDG--------RKILEDFDSNDFYSPRRNLATKGYDKCAEKGKVALVSAYGIHQLHIFIFVLAVFHVLYCIITYALGKTKMKKWKSWERETKTIEYQYANDPERFRFARDTSFGRRHLNIWSKSTFTLWITCFFRQF 236          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSI (MLO protein homolog 1 OS=Oryza sativa subsp. indica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.218e-52
Identity = 120/245 (48.98%), Postives = 144/245 (58.78%), Query Frame = 1
Query:  112 GASGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCSK--GKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQF 840
            G SG R L ETPTWAVAVVC VLV               W  ++ K+A+ +AL+KIK+ELMLLGFISLLLTVA + ISKICIP+S AN   PC   ++A                      +   AASG   RR+LA     D CSK  GKV  +S   +HQLHIFIFVLA+FHV Y I+TM L R            T ++EYQF+ DP RFRF  +TSF +RHL S++ TP L WIV FFRQF
Sbjct:    4 GRSGSRELPETPTWAVAVVCAVLVLVSAAMEHGLHNLSHWFRRRQKKAMGDALDKIKAELMLLGFISLLLTVAQAPISKICIPKSAANILLPCKAGQDA----------------------IEEEAASG---RRSLAGAGGGDYCSKFDGKVALMSAKSMHQLHIFIFVLAVFHVTYCIITMGLGRLKMKKWKKWESQTNSLEYQFAIDPSRFRFTHQTSFVKRHLGSFSSTPGLRWIVAFFRQF 223          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSJ (MLO protein homolog 1 OS=Oryza sativa subsp. japonica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 3.545e-52
Identity = 116/245 (47.35%), Postives = 141/245 (57.55%), Query Frame = 1
Query:  112 GASGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCSK--GKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQF 840
            G SG R L ETPTWAVAVVC VLV               W  ++ K+A+ +AL+KIK+ELMLLGFISLLLTVA + ISKICIP+S AN   PC   ++A                         +     S RR+LA     D CSK  GKV  +S   +HQLHIFIFVLA+FHV Y ++TM L R            T ++EYQF+ DP RFRF  +TSF +RHL S++ TP L WIV FFRQF
Sbjct:    4 GRSGSRELPETPTWAVAVVCAVLVLVSVAMEHGLHNLSHWFRRRQKKAMGDALDKIKAELMLLGFISLLLTVAQAPISKICIPKSAANILLPCKAGQDA-------------------------IEEEAASDRRSLAGAGGGDYCSKFDGKVALMSAKSMHQLHIFIFVLAVFHVTYCVITMGLGRLKMKKWKKWESQTNSLEYQFAIDPSRFRFTHQTSFVKRHLGSFSSTPGLRWIVAFFRQF 223          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO7_ARATH (MLO-like protein 7 OS=Arabidopsis thaliana GN=MLO7 PE=2 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 1.180e-47
Identity = 106/241 (43.98%), Postives = 131/241 (54.36%), Query Frame = 1
Query:  118 SGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQF 840
            SGG+ L +TPTWAVAVVC  L+               WL KKHK +L EALEKIK+ELM+LGFISLLLT    +I KIC+P   A +  PC  E                        L   +A S  S R  LAAG T+  C +G  P ++  GLHQLHI +F LA+FH++YS++TM LSR            T + +Y+FS D  R R   ETSF R H S WT TP   ++ CFFRQF
Sbjct:   28 SGGKELSQTPTWAVAVVCTFLILISHLLEKGLQRLANWLWKKHKNSLLEALEKIKAELMILGFISLLLTFGEPYILKICVPRKAALSMLPCLSEDTV---------------------LFQKLAPSSLS-RHLLAAGDTSINCKQGSEPLITLKGLHQLHILLFFLAIFHIVYSLITMMLSRLKIRGWKKWEQETLSNDYEFSIDHSRLRLTHETSFVREHTSFWTTTPFFFYVGCFFRQF 246          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLOH1_HORVU (MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.305e-46
Identity = 109/246 (44.31%), Postives = 138/246 (56.10%), Query Frame = 1
Query:  106 MAGASGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCSK-GKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQF 840
            MAG +GGR L +TPTWAVAVVC V++             G W  K  K+AL EALEK+K+ELML+GFISLLL V    +S+ICI +       PC     A                    R L  +     + RR LAA +  D C+K GKV  +S   +HQLHIFIFVLA+FHVLYS++TM LSR            T ++EYQF++DP R RF  +T+  RRHL   + TP + W+V FFRQF
Sbjct:    1 MAGPAGGRELSDTPTWAVAVVCAVMILVSVAMEHALHKLGHWFHKWRKKALGEALEKMKAELMLVGFISLLLIVTQDPVSRICISKEAGEKMLPCKPYDGA-----------GGGKGKDNHRRLLWLQGESETHRRFLAAPAGVDVCAKQGKVALMSAGSMHQLHIFIFVLAVFHVLYSVVTMTLSRLKMKQWKKWESETASLEYQFANDPSRCRFTHQTTLVRRHL-GLSSTPGVRWVVAFFRQF 234          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO10_ARATH (MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO10 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.221e-44
Identity = 99/246 (40.24%), Postives = 127/246 (51.63%), Query Frame = 1
Query:  109 AGASGGRSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVR 846
            AG +  + L +TPTWAVA+VC   +               WL +KHK +L EALEKIK+ELM+LGFISLLLT    +I KICIPE  A +  PC                              +      + RR LAA +T+ +C +G  P +   GLHQLHI +F +A FH+LYS +TM L R            T + +Y+FS DP RFR   ETSF R+H S WTK P   +  CF +QF R
Sbjct:   28 AGGAKEKGLSQTPTWAVALVCTFFILVSVLLEKALHRVATWLWEKHKNSLLEALEKIKAELMILGFISLLLTFGEQYILKICIPEKAAASMLPCP---------------------------APSTHDQDKTHRRRLAAATTSSRCDEGHEPLIPATGLHQLHILLFFMAAFHILYSFITMMLGRLKIRGWKKWEQETCSHDYEFSIDPSRFRLTHETSFVRQHSSFWTKIPFFFYAGCFLQQFFR 246          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO_HORVU (Protein MLO OS=Hordeum vulgare GN=MLO PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.673e-42
Identity = 100/241 (41.49%), Postives = 127/241 (52.70%), Query Frame = 1
Query:  127 RSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGS-WISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTDKCSKGKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVR 846
            R L ETP+WAVAVV   +V             G W   +HK+AL+EALEK+K+ELML+GFISLLL V     I+KICI E  A+   PC +  E                                            D C +GKV  +S   LHQLH+FIFVLA+FHV YS++T+ALSR            T ++EYQF++DP RFRF  +TSF +RHL   + TP + W+V FFRQF R
Sbjct:   10 RELPETPSWAVAVVFAAMVLVSVLMEHGLHKLGHWFQHRHKKALWEALEKMKAELMLVGFISLLLIVTQDPIIAKICISEDAADVMWPCKRGTEGRKP------------------------------------SKYVDYCPEGKVALMSTGSLHQLHVFIFVLAVFHVTYSVITIALSRLKMRTWKKWETETTSLEYQFANDPARFRFTHQTSFVKRHL-GLSSTPGIRWVVAFFRQFFR 213          
BLAST of FC917973 vs. ExPASy Swiss-Prot
Match: MLO8_ARATH (MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.673e-42
Identity = 104/242 (42.98%), Postives = 125/242 (51.65%), Query Frame = 1
Query:  127 RSLEETPTWAVAVVCFVLVTXXXXXXXXXXXXGKWLTKKHKRALYEALEKIKSELMLLGFISLLLTVAGSWISKICIPESVANTWHPCDKEREAXXXXXXXXXXXXXXXXXXRRRLLAAVAASGGSIRRALAAGSTTD-KCSK-GKVPFVSEDGLHQLHIFIFVLALFHVLYSILTMALSRAXXXXXXXXXXXTRTIEYQFSHDPERFRFARETSFGRRHLSSWTKTPVLIWIVCFFRQFVR 846
            + L +TPTWAVA VC   +             GK L  +HK AL +ALEKIK+ELM+LGFISLLLT   ++I  ICIP  VA T  PC                         RRLL+          R L+ G  +  KC+K G V  +S + LHQLHI IF LA+FHVLYS LTM L R            T +  Y+FS D  RFR   ETSF R H S WT+ P   ++ CFFRQF R
Sbjct:   39 KQLNQTPTWAVAAVCTFFIVVSVLLEKLLHKVGKVLWDRHKTALLDALEKIKAELMVLGFISLLLTFGQTYILDICIPSHVARTMLPCPAPN---------LKKEDDDNGESHRRLLSFE-------HRFLSGGEASPTKCTKEGYVELISAEALHQLHILIFFLAIFHVLYSFLTMMLGRLKIRGWKHWENETSSHNYEFSTDTSRFRLTHETSFVRAHTSFWTRIPFFFYVGCFFRQFFR 264          
The following BLAST results are available for this feature:
BLAST of FC917973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
MLO6_ARATH7.614e-6352.42MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6... [more]
MLO2_ARATH2.449e-6153.44MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2... [more]
MLO12_ARATH7.127e-6151.88MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO... [more]
MLOH1_ORYSI1.218e-5248.98MLO protein homolog 1 OS=Oryza sativa subsp. indic... [more]
MLOH1_ORYSJ3.545e-5247.35MLO protein homolog 1 OS=Oryza sativa subsp. japon... [more]
MLO7_ARATH1.180e-4743.98MLO-like protein 7 OS=Arabidopsis thaliana GN=MLO7... [more]
MLOH1_HORVU1.305e-4644.31MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1... [more]
MLO10_ARATH1.221e-4440.24MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO... [more]
MLO_HORVU5.673e-4241.49Protein MLO OS=Hordeum vulgare GN=MLO PE=1 SV=1[more]
MLO8_ARATH5.673e-4242.98MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ12YD04RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ12YD04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917973 ID=FC917973; Name=FC917973; organism=Citrus clementina; type=EST; length=848bp
CTCACAGACCTGAGTCATCAGAGAATCTGACTGTTATTAATTAGATTAAT
AAGAAATTCTCGAGAGTCTCATTGATAATATTTCGCAGACTGGAGAGTTG
ATTATATGGCCGGAGCTAGCGGAGGAAGATCTTTGGAGGAGACGCCGACA
TGGGCCGTTGCGGTCGTTTGTTTTGTTTTGGTTACGATTTCAATAATTAT
CGAGCACATAATCCATCTTATCGGAAAGTGGCTGACAAAGAAACACAAGA
GAGCTTTATACGAAGCACTCGAAAAGATCAAATCAGAGTTGATGCTACTG
GGGTTCATATCGTTGCTACTAACAGTAGCAGGTAGTTGGATATCAAAAAT
ATGCATACCAGAAAGTGTAGCAAATACATGGCATCCATGCGATAAGGAAA
GAGAAGCAGAGCTAAACAATGAGAAGGAGACTACTGAACAAGAAACGACA
GAACACGAAAACCGCCGGAGGCTTCTGGCGGCGGTGGCCGCCTCGGGTGG
AAGTATCCGAAGAGCTTTGGCGGCGGGATCAACAACCGACAAATGTTCCA
AGGGCAAAGTTCCATTTGTGTCTGAGGACGGTCTCCATCAACTCCATATT
TTCATCTTTGTCTTAGCACTTTTCCATGTCCTTTACAGTATCCTTACAAT
GGCCTTGAGCAGAGCCAAGATGAAGAAGTGGAAGAAATGGGAAAAGGAAA
CAAGAACCATTGAGTATCAGTTCTCTCACGATCCTGAGAGGTTCAGATTT
GCAAGAGAGACATCGTTTGGCAGGAGGCATTTGAGTTCGTGGACCAAGAC
ACCTGTCCTCATTTGGATAGTCTGTTTCTTCAGGCAATTTGTTCGGTC
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