FC917997

Overview
NameFC917997
Unique NameFC917997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length874
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8096 contig Ccv1_Contig8096:1..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC917997 vs. ExPASy Swiss-Prot
Match: UFOG6_MANES (Anthocyanidin 3-O-glucosyltransferase 6 (Fragment) OS=Manihot esculenta GN=GT6 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.624e-24
Identity = 67/158 (42.41%), Postives = 89/158 (56.33%), Query Frame = 1
Query:  418 YVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGF-----VLHLPTRXXXXXXXXXXXXXXIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMKCDG-VPSVYNVGPM 873
            ++D  K  +KEA+ +    ++  +AG VLD FC+SMID A ELGVP Y+FFTSGAAFLGF     ++H                  + + AN +P RVLP+    K   F AF    R  +E KGI+VNTF ELESHA+  L      +P +Y VGP+
Sbjct:    8 FIDKQKAHVKEAVSKLTARSDSSLAGFVLDMFCTSMIDVAKELGVPYYIFFTSGAAFLGFLFYVQLIHDEQDADLTQFKDSDAELSVPSLANSLPARVLPASMLVK-DRFYAFIRIIRGLREAKGIMVNTFMELESHALNSLKDDQSKIPPIYPVGPI 164          
BLAST of FC917997 vs. ExPASy Swiss-Prot
Match: UFOG1_MANES (Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot esculenta GN=GT1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 82/250 (32.80%), Postives = 126/250 (50.40%), Query Frame = 1
Query:  151 VGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHV-LNNNV---KIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHL-----PTRXXXXXXXXXXXXXXIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMKCDGVPSVYNVGPM 873
            +GHLVS +  AK  LLL R +      S SITVL+      T+  ++     +A +       +RFI +P+ +   +  F S        ++  K  +KE++++     ++V   ++ G ++D FC++MID ANE GVPSY+F+TSGAAFL F+LH+                      +    N  P + +P+   +K       EN  RR+ E KG+I+NTF ELESHA+E        P +Y VGP+
Sbjct:    1 MGHLVSAVETAK--LLLSRCH------SLSITVLIFNNSVVTSKVHNYVDSQIASSSNR----LRFIYLPR-DETGISSFSS-------LIEKQKPHVKESVMKITEFGSSVESPRLVGFIVDMFCTAMIDVANEFGVPSYIFYTSGAAFLNFMLHVQKIHDEENFNPTEFNASDGELQVPGLVNSFPSKAMPTAILSKQWFPPLLEN-TRRYGEAKGVIINTFFELESHAIESFKD----PPIYPVGPI 225          
BLAST of FC917997 vs. ExPASy Swiss-Prot
Match: UFOG2_MANES (Anthocyanidin 3-O-glucosyltransferase 2 (Fragment) OS=Manihot esculenta GN=GT2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.989e-17
Identity = 51/126 (40.48%), Postives = 68/126 (53.97%), Query Frame = 1
Query:  511 FCSSMIDTANELGVPSYVFFTSGAAFLGFVL-----HLPTRXXXXXXXXXXXXXXIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMKCDGVPSVYNVGPM 873
            FC+ M+D A+E G+PSY+FF SG  FLGF+L     H                  + +  NP P R+LPS   NK   F       ++F++ KGIIVNTF ELES A+E       VP +Y+VGP+
Sbjct:    1 FCTPMMDLADEFGIPSYIFFASGGGFLGFMLYVQKIHDEENFNPIEFKDSDTELIVPSLVNPFPTRILPSSILNKE-RFGQLLAIAKKFRQAKGIIVNTFLELESRAIESFK----VPPLYHVGPI 121          
BLAST of FC917997 vs. ExPASy Swiss-Prot
Match: ANGLT_ROSHC (Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15
Identity = 70/263 (26.62%), Postives = 118/263 (44.87%), Query Frame = 1
Query:  127 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTA-------TASDNDAHIKSLAGAGATADVSIRFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHLPTRXXXXXXXXXXXXXXI-FTYANPVPYRVLPSLCFNKHGGF-SAFENFGRRFKETKGIIVNTFEELESHAVEYL-----MKCDGVPSVYNVGPM 873
            +V  P P +GHL+S++   K LL          + SFSIT+L     T         AS ND  + +   A +  + +I F  +P ++  P    K    F  EY       I + +    L +++K   L+LD FC ++ D   +L +P++ F+TS    L  +L++PT               I  +   P+P   +P L F++   F  +F +      ++ GII+NTF+ LE  A++ L     +     P ++ VGP+
Sbjct:    6 IVLYPYPGLGHLISMVELGKLLLT--------HHPSFSITILASTAPTTIAATAKLVASSND-QLTNYIKAVSADNPAINFHHLPTISSLPEHIEKLNLPF--EYARLQIPNILQVL--QTLKSSLK--ALILDMFCDALFDVTKDLNIPTFYFYTSAGRSLAVLLNIPTFHRTTNSLSDFGDVPISISGMPPIPVSAMPKLLFDRSTNFYKSFLSTSTHMAKSNGIILNTFDLLEERALKALRAGLCLPNQPTPPIFTVGPL 253          
The following BLAST results are available for this feature:
BLAST of FC917997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
UFOG6_MANES5.624e-2442.41Anthocyanidin 3-O-glucosyltransferase 6 (Fragment)... [more]
UFOG1_MANES2.791e-2332.80Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot... [more]
UFOG2_MANES2.989e-1740.48Anthocyanidin 3-O-glucosyltransferase 2 (Fragment)... [more]
ANGLT_ROSHC4.772e-1526.62Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hy... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA92DH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA92DH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917997 ID=FC917997; Name=FC917997; organism=Citrus clementina; type=EST; length=874bp
ATAGTTGTGTCGTTCAAAGAAATTAACGACGACAACTCCCCCGTATAAGA
AATTTAAACGACACTGCAAACATCACAATTAACAAAAACGAATCATCAGT
CGTCAATCATGAAGGAGAAAGCCGAGTTGGTGTTCATTCCTTCACCAAGT
GTAGGCCATCTCGTGTCCGTAATCGTGTTCGCAAAGCGCTTATTATTACT
GGACCGTGATAATGCCGCAGGCAGCAACAATAGCTTCTCCATTACCGTTC
TTGTCATGCAAGAACACACGGCCACCGCCTCCGACAACGATGCTCACATC
AAATCACTCGCCGGCGCCGGCGCCACCGCCGATGTAAGCATACGGTTCAT
TGGTGTCCCGAAGATGAACCCACCTCCGCTGGACTACTTCAAGTCCCCTG
AAAAGTTCATCACAGAGTATGTGGACAGCCATAAAGATTGTATTAAAGAA
GCTATTATCGAGCATGTCTTGAACAACAACGTAAAAATCGCGGGACTGGT
GCTCGATTTTTTTTGCTCGAGCATGATTGATACTGCGAACGAGCTTGGGG
TTCCTTCTTACGTGTTCTTCACGTCAGGTGCGGCTTTTTTGGGTTTCGTC
CTGCATCTTCCGACTCGGGGTGGTGAAGAATTTGAAGAATCGGAAGCTGA
CTCAGCCGATATTTTTACTTATGCTAATCCGGTACCGTACCGGGTTCTGC
CTTCTCTCTGTTTCAACAAGCATGGAGGGTTCAGCGCCTTCGAGAATTTT
GGAAGAAGATTCAAGGAGACGAAGGGTATAATTGTAAATACGTTCGAAGA
GCTGGAATCCCATGCGGTTGAGTATTTGATGAAGTGTGATGGTGTACCGT
CGGTTTACAATGTGGGACCGATGA
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