FC918006

Overview
NameFC918006
Unique NameFC918006
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length837
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11267 contig Ccv1_Contig11267:162..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.964e-67
Identity = 129/205 (62.93%), Postives = 157/205 (76.59%), Query Frame = 1
Query:  223 GGVAWQNGRNQRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNW 837
            GG AW  GR++RG VAIPGPKG P+ GSL  +S GL HR L ++A   G  QLM+FSLG  TPAV+ SDP  A+E+LTSPHFA+RP+KQSA+ L+F RAIGFAPNG YWRLLRRIAS+HLF+PRRI AHE GR  D   ML +I  E    G V +R+HLQ AALNNIMGSVFG R+D+  +++ +++L EMV EGF+LLGAFNW
Sbjct:   64 GGCAWA-GRHKRGRVAIPGPKGWPIIGSLMDMSVGLPHRKLESLARLHGAKQLMSFSLG-CTPAVITSDPEVARELLTSPHFANRPLKQSAQQLLFGRAIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEGFQLLGAFNW 266          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 4.732e-65
Identity = 133/218 (61.01%), Postives = 157/218 (72.02%), Query Frame = 1
Query:  205 WAFSTGGGVAWQNGRNQRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAM---AWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDS----KSLQELTEMVREGFELLGAFNW 837
            WA S GG  AW +GR + G+  I GP+G+P+FGS+F LSRGL HR L AM   A +    +LMAFS+G  TPAVV+S P TA+E+L  P FADRP+K+SA  L+F+RAIGFAP+G YWRLLRRIAS+HLFSPRR+ AHEPGR  D   ML  +A EQ   G V LR HLQ AALNNIMGSVFG RYD+   S       ++L  MVREGFELLGAFNW
Sbjct:   53 WAASPGGP-AWAHGRGRLGATPIEGPRGLPVFGSIFALSRGLPHRALDAMSRDAAAPRARELMAFSVG-ETPAVVSSCPATAREVLAHPSFADRPLKRSARELLFARAIGFAPSGEYWRLLRRIASTHLFSPRRVAAHEPGRQADATAMLSAMAAEQSATGAVVLRPHLQAAALNNIMGSVFGRRYDVSSSSGAAADEAEQLKSMVREGFELLGAFNW 268          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.087e-53
Identity = 118/214 (55.14%), Postives = 138/214 (64.49%), Query Frame = 1
Query:  205 WAFSTGGGVAWQNGRNQRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNT-QLMAFSLGGSTPAVVASDPYTAKEILTSPHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDI--DRDSKSLQELTEMVREGFELLGAFNW 837
            WA S GG  AW NGR    S+    P   P   +        A R        R    +LMAFS+G  TPAVV+S P TA+E+L  P FADRP+K+SA  LMF+RAIGFAPNG YWR LRR+AS+HLFSPRR+ +HEPGR  D   ML +IA EQ  +G V+LR HLQ AALNNIMGSVFG RYD+     +   + L  MVREGFELLGAFNW
Sbjct:   52 WATSPGGP-AWTNGRGASASLLSWDPVVCPCSAASSRCPGAAAPRPRRDGPRRRPRAKELMAFSVG-DTPAVVSSCPATAREVLAHPSFADRPVKRSARELMFARAIGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSASGAVALRPHLQAAALNNIMGSVFGTRYDVTSGAGAAEAEHLKSMVREGFELLGAFNW 263          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.034e-40
Identity = 105/250 (42.00%), Postives = 142/250 (56.80%), Query Frame = 1
Query:   91 EKSLWVFTLFGSLAQQNXXXXXXXXXXXXXXXXXXXXTWAFSTGGGVAWQNGRNQRGSVAI-PGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPHFADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFNW 837
            + +LW+  L     Q+N                     + +S  GG AW         ++I PGPKG PL GS+  L   LAH  +AA A +    +LMAFSLG  T  +V   P  AKEIL S  FADRP+K+SA  LMF+RAIGFA  G YWR LRRIAS+HLF PR+I A E  R    A M+H I N ++H   + +R+ L+ A+L+N+M SVFG  Y +   +  +++L  +V +G++LLG FNW
Sbjct:    6 DDNLWIIALTSKCTQENLAWVLLIMGSLWLTMTF----YYWSHPGGPAWGKYYTYSPPLSIIPGPKGFPLIGSM-GLMTSLAHHRIAAAAATCRAKRLMAFSLG-DTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFASYGVYWRSLRRIASNHLFCPRQIKASELQRSQIAAQMVH-ILNNKRHRS-LRVRQVLKKASLSNMMCSVFGQEYKLHDPNSGMEDLGILVDQGYDLLGLFNW 247          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.364e-13
Identity = 62/189 (32.80%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  274 PGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPH--FADRPIKQSAECLMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSV-FGVRYDIDRDSKSLQELTEMVREGFELLGAF 831
            PGP+ +P  G+L  L   L H++L  ++   G   LM   LG S P +V S    A+EI  +    F+ RP   +A  L +   + FAP G YWR +R+I    L SP+R+ + E  R  +  ++L  IA     +G V+L   L L+  NNI+  +  G R     D  +  +++EM++E   +LG F
Sbjct:   35 PGPRKLPFIGNLHQLGT-LPHQSLQYLSNKHG--PLMFLQLG-SIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYGSTVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIA---LSHGPVNL-SELTLSLTNNIVCRIALGKRNRSGADDAN--KVSEMLKETQAMLGGF 213          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12
Identity = 53/193 (27.46%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  274 PGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILT--SPHFADRPIKQSAECLMFSRA-IGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYD---IDRDSKSLQELTEMVREGFELLGAFN 834
            P P G+P+ G+L  L   L H++L  ++   G   L+     G  P V+ S P TAK++L     H   RP  +    L ++   I F+    YW+ LR++    LF  +RI + +P +  +   ++ +IA        V+L        +N I  +VFGV +    ++ D     +  ++V E  E+LG+F+
Sbjct:   32 PSPPGLPIIGNLHQLGE-LPHQSLCKLSKKYGPVMLLKL---GRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQGTVLNND-----KFQDLVHEALEMLGSFS 215          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12
Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  253 QRGSVAIPGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPH--FADRPIKQSAECLMF-SRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSV-FGVRYDIDRDSKSLQELTEMVREGFELLGAFN 834
            ++  + +P P+ +P+ G+L  L   L HR+L  ++   G   L+ F   GS P +VAS    A++I+ +    +A RP     + L + S+ +GF+P G YWR  + I   HL S  R+ ++   R  + A M+  I  +   +  ++L +HL  +  NNI+  V  G  YD +++S     +  ++ +  ELLG FN
Sbjct:   32 KQNMLLLPSPRKLPIIGNLHQLG-SLPHRSLHKLSQKYGPVMLLHF---GSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKI-RQGCDSSVINLGEHL-CSLTNNIISRVALGRTYD-EKES----GIEHIIEQFVELLGIFN 218          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.070e-12
Identity = 60/190 (31.58%), Postives = 89/190 (46.84%), Query Frame = 1
Query:  274 PGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPH--FADRPIKQSAECLMF-SRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFN 834
            PGP  +P+ GS+  L     HR L  +A   G   LM   LG     +V+S  Y AKE++ +    FA RP     + + + S  IGF+P G YWR +R+I +  L S +R+ +  P R  +   ++  IA+E+     V+L + +          S FG RY         +E    VRE  +L G FN
Sbjct:   21 PGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYG--PLMHLQLGEVIFIIVSSAEY-AKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEE--GSVVNLSQAIDSLIFTITSRSAFGKRY------MEQEEFISCVREVMKLAGGFN 199          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 53/189 (28.04%), Postives = 91/189 (48.15%), Query Frame = 1
Query:  274 PGPKGVPLFGSLFTLSRGLAHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPH--FADRPIKQSAECLMFSRA-IGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIANEQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAF 831
            P P  +P+ G+L  L   L HR+L ++A   G   L+     G  P ++ S    A+EIL +    FA RP   +A  + +    + F+P G YWR +R+I    L S +R+ ++   R  +  +M+  I+        V+L + L L +   I    FG +Y+ + + K+  +  ++  E   L+GAF
Sbjct:   33 PSPPNLPIIGNLHQLGN-LPHRSLRSLANELGPLILLHL---GHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYEGEEERKN--KFADLATELTTLMGAF 215          
BLAST of FC918006 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.306e-11
Identity = 54/192 (28.12%), Postives = 95/192 (49.48%), Query Frame = 1
Query:  274 PGPKGVPLFGSLFTLSRGL-AHRTLAAMAWSRGNTQLMAFSLGGSTPAVVASDPYTAKEILTSPH--FADRPIKQSAECLMF-SRAIGFAPNGTYWRLLRRIASSHLFSPRRILAHEPGRHLDCAVMLHNIAN-EQKHNGFVSLRKHLQLAALNNIMGSVFGVRYDIDRDSKSLQELTEMVREGFELLGAFN 834
            P P+ +P+ G+L  L  GL  HR+L  ++   G   L+     GS P +VAS     ++I+ +    +++RP  + A+ L++ S+ + F+P+G YWR +R I   HL S +R+ ++   R  + + M+  +       +    LR      A N I     G +Y+ + D+K+  +      +  ELLG FN
Sbjct:   27 PSPRKLPIIGNLHQL--GLHPHRSLHKLSKKYGPVMLLHL---GSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYNDEIDAKATLD------KFVELLGTFN 207          
The following BLAST results are available for this feature:
BLAST of FC918006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
C78A4_PINRA2.964e-6762.93Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C78AB_ORYSJ4.732e-6561.01Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C78A1_MAIZE7.087e-5355.14Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C78A3_SOYBN4.034e-4042.00Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71A9_SOYBN9.364e-1332.80Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BA_ARATH1.597e-1227.46Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME2.086e-1229.80Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71DB_LOTJA6.070e-1231.58Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71A1_PERAE7.927e-1228.04Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A3_SOLME2.306e-1128.13Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA92DH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA92DH04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918006 ID=FC918006; Name=FC918006; organism=Citrus clementina; type=EST; length=837bp
AAAAGAAAAAAAACAAAAAGAAACTCAACTACTCATTCCTCTGCAAGTTA
AACAATATTTAATAACATGGAGTTAGGGTTTATCGATAGAGAAAAATCTT
TGTGGGTTTTCACTCTCTTTGGTTCTCTTGCTCAACAAAATCTTTTTGAT
TCGTATAGTTTGTTGTCACTCTTTTTAGCTTTGGTTTTGCTTTATCTACT
CACTTGGGCTTTCTCCACCGGCGGCGGAGTCGCGTGGCAGAACGGGAGAA
ACCAGAGAGGCTCCGTCGCGATCCCGGGACCAAAGGGTGTTCCGTTATTT
GGCAGCTTGTTCACTCTGAGCCGCGGCTTGGCTCATCGGACGTTAGCAGC
CATGGCTTGGAGCCGAGGGAACACTCAGCTGATGGCCTTCAGCCTCGGCG
GCTCGACTCCCGCTGTGGTCGCCTCCGACCCTTACACTGCCAAAGAAATC
TTGACGTCGCCCCACTTCGCTGACCGTCCGATCAAGCAGTCAGCTGAGTG
CCTGATGTTCAGCCGGGCAATAGGCTTCGCTCCCAACGGGACTTACTGGC
GACTCTTGCGCAGAATTGCTTCGTCTCACCTTTTCTCTCCCCGGCGCATT
TTAGCCCACGAACCCGGCCGCCACCTAGACTGCGCTGTCATGCTACACAA
CATTGCAAACGAACAGAAACATAACGGTTTTGTCTCTTTAAGGAAACACC
TCCAGTTGGCTGCCTTGAACAACATCATGGGAAGTGTGTTCGGCGTCAGA
TACGATATTGACCGCGATAGCAAATCGCTTCAAGAGCTCACCGAAATGGT
AAGGGAAGGTTTTGAGTTATTGGGGGCATTTAATTGG
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