FC918009

Overview
NameFC918009
Unique NameFC918009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13424 contig Ccv1_Contig13424:132..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 6.357e-63
Identity = 132/274 (48.18%), Postives = 170/274 (62.04%), Query Frame = 1
Query:   70 SKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKLIENVXXXXXXXXXXXXXXDFCPTLTKNFLRKKWEELFRSLKDQENTLFPLIRARKKAREEWLSKKANHQHHADVEEYVLSYVDTLFDLRLP 891
            S +  LPP P   P +G L WL +    +E  LR +H + GPIVT+     PAIF+ADR+L H+ALV NGAV+ADRPP   + K +  D+ NIS+G YG TWRL RRN+TSEILHPSR  +Y  AR WVLE+L +R ++     GG++   P+ +  HL YAMF LLVLMCFGDKLD  QIK +E +              +  P  TK  LRK+W+E  +  + Q + L PLIRAR+K  EE   +K + Q   D ++YV SYVDTL DL LP
Sbjct:   26 SSSPPLPPDPNFLPFLGTLQWLREGLGGLESYLRSVHHRLGPIVTLRITSRPAIFVADRSLTHEALVLNGAVYADRPPPAVISKIV--DEHNISSGSYGATWRLLRRNITSEILHPSRVRSYSHARHWVLEILFERFRNH----GGEE---PIVLIHHLHYAMFALLVLMCFGDKLDEKQIKEVEFIQRLQLLSLTKFNIFNIWPKFTKLILRKRWQEFLQIRRQQRDVLLPLIRARRKIVEE---RKRSEQE--DKKDYVQSYVDTLLDLELP 285          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.913e-31
Identity = 85/273 (31.14%), Postives = 136/273 (49.82%), Query Frame = 1
Query:   70 SKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKLIENVXXXXXXXXXXXXXXDFCPTLTKNFLRKKWEELFRSLKDQENTLFPLIRARKKAREEWLSKKANHQHHADVEEYVLSYVDTLFDLRL 888
            SK  KLPPGP  +PV+G L  + +S     QI+R+L  K+GPI T+  G    I +++  L H+AL+  G VFA RP   P     + D+  ++   YGP WR  R+N+    L   R   ++  RK  ++ +++++++E+ +  G      V V  + ++A+FC+L+ MCFG ++D   I+ I+ +              D+ P L+  F  K+ +      K Q  T+ P I  RKK  E             D      SY+DTLFDL++
Sbjct:   37 SKKLKLPPGPPGWPVVGNLLQVARSGKPFFQIMRELRQKYGPIFTLRMGTRTMIILSNADLVHEALILKGQVFATRPRENPTRTVFSCDKFTVNAAVYGPVWRSLRKNMVQNGLSSIRLKEFRAVRKSAMDKMIEKIRAEADANEG-----VVWVLKNARFAVFCILLAMCFGVEMDEKTIEKIDQM-MKSVLIALDPRLDDYLPILSP-FFSKQRKHAMDVRKQQIKTIVPFIEQRKKILE---------SPEIDKTAASFSYLDTLFDLKI 293          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.432e-30
Identity = 79/273 (28.94%), Postives = 136/273 (49.82%), Query Frame = 1
Query:   70 SKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKLIENVXXXXXXXXXXXXXXDFCPTLTKNFLRKKWEELFRSLKDQENTLFPLIRARKKAREEWLSKKANHQHHADVEEYVLSYVDTLFDLRL 888
            SK   LPPGP  +P++G L  + +S     + +  +  K+G I T+  G    I + D  L H+A++Q GA +A RPP  P     ++++  ++   YGP W+  RRN+   +L  +R   ++  R   ++ L++RLK E+    G      V V    ++A+FC+LV MCFG ++D + ++ I+ V              D+ P L+  F  K+ ++     ++Q   L P+I  R++A +            +D      SY+DTLFDL++
Sbjct:   32 SKKFNLPPGPPGWPIVGNLFQVARSGKPFFEYVNDVRLKYGSIFTLKMGTRTMIILTDAKLVHEAMIQKGATYATRPPENPTRTIFSENKFTVNAATYGPVWKSLRRNMVQNMLSSTRLKEFRSVRDNAMDKLINRLKDEAEKNNG-----VVWVLKDARFAVFCILVAMCFGLEMDEETVERIDQV-MKSVLITLDPRIDDYLPILSP-FFSKQRKKALEVRREQVEFLVPIIEQRRRAIQ---------NPGSDHTATTFSYLDTLFDLKV 288          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.932e-27
Identity = 79/273 (28.94%), Postives = 132/273 (48.35%), Query Frame = 1
Query:   70 SKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKLIENVXXXXXXXXXXXXXXDFCPTLTKNFLRKKWEELFRSLKDQENTLFPLIRARKKAREEWLSKKANHQHHADVEEYVLSYVDTLFDLRL 888
            SK   LPPGP  +P++G L  +  S  +  + +R L  K+G I T+  G    I +A   LAH+AL+Q G +FA RP   P     + ++ +++   YGP WR  RRN+   +L PSR   ++  R+  ++ L++R++ ++           V    + ++A+F +LV MCFG ++D++++    +               DF P L      K+ + +    K Q  TL PLI  R+   +   S K              SY+DTLFD+++
Sbjct:   22 SKTPNLPPGPPGWPIVGNLFQVAGSGKQFFEYIRDLKPKYGSIFTLKMGSRTMIIVASAELAHEALIQKGQIFASRPRENPTRTIFSCNKFSVNAAVYGPVWRSLRRNMVQNMLSPSRLKEFREFREIAMDKLIERIRVDAKENND-----VVWALKNARFAVFYILVAMCFGVEMDNEEMIERVDQMMKDVLIVLDPRIDDFLPILRLFVGYKQRKRVNEVRKRQIETLVPLIEKRRSVVQNPGSDKTAAS---------FSYLDTLFDVKV 280          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 1
Query:   67 TSKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSG 501
            + +N +LPPGP+ +P+IG     V+ PL   + L+ L  K+GPI+ +  G  P + ++    A   L  +  +FA RPP   V K    + ++I+   YG  WR  R+    E+L   R  ++K  R+  L  ++  +  ES SG
Sbjct:   36 SQRNERLPPGPYPWPIIGNFHQ-VRLPLH--RTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPT-SVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESG 176          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 58/259 (22.39%), Postives = 111/259 (42.86%), Query Frame = 1
Query:   70 SKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKL-IENVXXXXXXXXXXXXXXDFCPTLTKNFLRKKWEELFRSLKDQENTLFPLIRARKKAREEWLSKKANHQHHADVE 843
            +KN  LPP P+  PVIG L  L    L   + LR L  ++GP++ +  G  P + ++   +AH  +  +  V A+RP    V+  I    R+++   YG  WR  +      +L+     +Y++ R+  ++ ++++L+  S S      P PV+++  L      ++  +  G K    +  + +EN+              ++ P+L+       W +  R L  +   +        K  +E+L +       AD E
Sbjct:   27 TKNFNLPPSPWRLPVIGNLHQL---SLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKT-KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSS----PSPVNLSQILMTLTNDIICRVALGRKYSGKKDGIDVENIVRTFAALLGEFPVGEYIPSLS-------WIDRIRGLDHKMEVV-------DKRFDEFLERVVKEHEEADKE 263          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: CP1B1_MOUSE (Cytochrome P450 1B1 OS=Mus musculus GN=Cyp1b1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 50/184 (27.17%), Postives = 82/184 (44.57%), Query Frame = 1
Query:   88 PPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEI-----LHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKLIE 624
            PPGPF +P+IG    + ++         +L  ++G +  I  G CP + +   +  H+ALVQ G++FADRPP       +    R+++ G Y   W+  RR+  S +      HP   G  +         L+  L      G   D   PV V      A+  ++  +CFG + +HD  + +E
Sbjct:   51 PPGPFPWPLIGNAAAVGQAS---HLYFARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGSIFADRPPFASF--RVVSGGRSLAFGHYSEHWKTQRRSAYSTMRAFSTRHPRSRGLLEGHALAEARELVAVLVRRCAGGAFLDPTQPVIV------AVANVMSAVCFGCRYNHDDAEFLE 223          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = 1
Query:   67 TSKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSV 534
            +S   + PPGP+  P++G L  L++S  +V   LR+L +K+GP++ +  G    + ++  A A + L     +FA R P+L V +    D  ++    YG  WR+ R+  T E+L           R      L+  +K+ S+  GG     PV++
Sbjct:   53 SSSKKRRPPGPWNLPLVGGLLHLLRSHPQVA--LRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASR-PSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTL 205          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 57/191 (29.84%), Postives = 89/191 (46.60%), Query Frame = 1
Query:   67 TSKNNK---LPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAMFCLLVLMCFGDKLDHDQIKLIENV 630
            T K+N    LPPGP+  P+IG +  LV SPL   + LR L AK+G ++ +  G    I ++    A + +  +  +FA RP  L   + +  D + ++   YG  WR  R+    E+L   R  +++  R+   EVL   +K  +T  G       V+V   +   +F +      G K  H Q KLI  V
Sbjct:   26 TKKSNSTPSLPPGPWKLPIIGNMHNLVGSPLPHHR-LRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVL-AAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIRE---EVLTSFIKRMATIEGSQ-----VNVTKEVISTVFTITARTALGSKSRHHQ-KLISVV 205          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 1
Query:   70 SKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSG 501
            S+  KLPPGP+  P IG++  L        ++LR L  K+GP++ +  G   A+ +    +A + L  +   FA RP  L  +  I  D+ +I+   YG  W+  R+   +E+L      ++   R   +  L+D ++S S+SG
Sbjct:   26 SQTKKLPPGPWKLPFIGSMHHLAGG--RPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLL-AMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSG 166          
The following BLAST results are available for this feature:
BLAST of FC918009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
C89A2_ARATH6.357e-6348.18Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C77A2_SOLME4.913e-3131.14Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C77A3_SOYBN5.432e-3028.94Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
C77A1_SOLME1.932e-2728.94Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C75A1_PINTA2.994e-1231.03Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71AK_ARATH5.107e-1222.39Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
CP1B1_MOUSE1.941e-1127.17Cytochrome P450 1B1 OS=Mus musculus GN=Cyp1b1 PE=2... [more]
C99A2_ORYSJ1.941e-1128.21Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71D9_SOYBN3.311e-1129.84Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71D6_SOLCH3.311e-1129.17Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA35BA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA35BA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918009 ID=FC918009; Name=FC918009; organism=Citrus clementina; type=EST; length=892bp
TTCATCATCCTCATCTCAATCTTCATTGCTGCCCTCCTCAAAGCTTTCAT
CATCAACCTTCTCTTCACGAGCAAAAATAATAAGCTTCCCCCAGGCCCCT
TTACTTTCCCCGTTATTGGCGCTCTCCCGTGGCTTGTGAAATCTCCCTTA
GAGGTAGAACAAATCCTCAGAAAGCTTCATGCCAAGTTTGGCCCCATCGT
CACTATCCCTTCCGGCCATTGCCCCGCTATCTTCATCGCCGATCGCGCAC
TTGCCCACAAGGCCTTAGTCCAGAACGGCGCTGTCTTTGCTGACCGACCG
CCAGCTCTCCCAGTCCTCAAAACCATTACCAAAGACCAGCGGAACATCTC
TACAGGTTTTTACGGCCCCACGTGGCGGCTCTTCCGCCGGAATCTCACTT
CAGAAATCCTCCACCCTTCGCGTGCGGGAACCTACAAGCGCGCCCGCAAA
TGGGTTCTGGAAGTTCTCTTGGACCGCCTCAAGTCAGAGTCCACGAGCGG
CGGCGGTGATGATCATCCGATTCCGGTTAGCGTTAATGATCATCTTCAGT
ATGCTATGTTCTGCTTGTTAGTGCTCATGTGTTTCGGCGACAAGCTCGAC
CACGACCAAATCAAATTAATTGAGAATGTTCAGCGTCGTAGGTTGCAGGC
TTTCGCCAGATTCAGATTATTAGACTTCTGTCCAACGTTAACAAAAAATT
TTCTTCGTAAGAAGTGGGAGGAATTATTTCGGTCCCTTAAAGATCAAGAG
AACACACTGTTTCCTTTGATAAGAGCAAGAAAGAAGGCCAGGGAAGAGTG
GTTATCAAAGAAAGCTAATCATCAACATCATGCGGATGTGGAGGAGTATG
TGCTGTCTTATGTCGATACCCTGTTCGATTTGCGGCTTCCGG
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