FC918175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_PONAB (UPF0549 protein C20orf43 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29 Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG +E++ VL+ RMEE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_HUMAN (UPF0549 protein C20orf43 OS=Homo sapiens GN=C20orf43 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29 Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG +E++ VL+ RMEE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_MACFA (UPF0549 protein C20orf43 homolog OS=Macaca fascicularis GN=QccE-12445 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.064e-29 Identity = 72/176 (40.91%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG E++ VL+ RMEE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_RAT (UPF0549 protein C20orf43 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.598e-29 Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+I+ +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG +E++ +L+ RMEE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKATSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_BOVIN (UPF0549 protein C20orf43 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.843e-29 Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ ++LS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG +E++ VL+ R+EE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKAASHIKSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVEVLKSRIEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_PIG (UPF0549 protein C20orf43 homolog OS=Sus scrofa PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.024e-28 Identity = 70/176 (39.77%), Postives = 107/176 (60.80%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ ++LS P E + GD RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG +E++++L+ RMEE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKAASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRMEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_MOUSE (UPF0549 protein C20orf43 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.024e-28 Identity = 69/176 (39.20%), Postives = 107/176 (60.80%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K S+I+ +K++ ++LS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NG +E++ +L++RMEE +L+ K Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: CT043_CHICK (UPF0549 protein C20orf43 homolog OS=Gallus gallus GN=RCJMB04_16p11 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.640e-28 Identity = 69/176 (39.20%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 407 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKNLPKQ----YSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 +K K+D + +++W C LS E L P V +LG ++NK+A++ LL K+ K S+IK LK++ + L+ P G +E+ G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I+ NGN+E++ VL++RME+ +LK K Sbjct: 19 RKAVKVDKTAELVARWYYCTLSQEKLCRPIVACELGRLYNKDAVIEFLLDKSADKTPMEAASHIKSLKNVTELNLADNPAWSGDKESKKGDTYDDIQSARFICPVVGLEMNGRHRFCFLRNCGCVFSERALKEIKTEVCHKCGVPFQEEDVIILNGNKEDVEVLKKRMEDRRLKSK 194
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: U549_DICDI (UPF0549 protein OS=Dictyostelium discoideum GN=DDB_G0288549 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-20 Identity = 60/196 (30.61%), Postives = 98/196 (50.00%), Query Frame = 2 Query: 383 CYLNMYAEKKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKNL--PKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEF-NGKYRFVAMRTCGHVLSTKALKEVKSS-----------------------SCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVKE 892 C L +K+ D ++ KW CAL+ + L EP V+D LG +FNK+ ++ ALL+ +L K +S+I+ L+ + V S P E++ + CPIT +E + Y+F ++TCGHV S KA KE+K+ SC +C +E+ D I N + EE ++ ++E+ K+ Sbjct: 12 CELVKTKKKEVKVFDKDQVDFGKWFLCALAQDTLSEPIVLDDLGNLFNKDNIIEALLNGSLETSKNFSHIRSLRSIYTVNFSPNPAHEKDSTVSPWLCPITKIEVGSSNYKFKFLKTCGHVFSEKAFKELKNDDSNNNNNNNNNNKKEIDSSKDNLSCFLCSKEYITNDLITINPSGEEFEQMKVTLQEKLANSKK 207
BLAST of FC918175 vs. ExPASy Swiss-Prot
Match: YAT9_SCHPO (UPF0549 protein C1D4.09c OS=Schizosaccharomyces pombe GN=SPAC1D4.09c PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17 Identity = 51/168 (30.36%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 407 KKPDKIDP------NEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN-LPKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILNNGNEEEISVLRERMEEEKLKVK 889 K+P K+ P + S++ CA+++EPL P V LG ++NK +++ LL ++ +PK S+IK LKD++ +++ ++ + + CPIT + Y+F + CGHV ALK+ C C++ + E D I N N E++ L +R+ + L K Sbjct: 16 KEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSVPKSPSHIKSLKDVVQLQVEL-----DDSGKVLWLCPITRHVMSDTYQFAYIVPCGHVFEYSALKQFGEKMCFQCNQVYEEKDVIPINPNAEQLKTLSKRLLDLALSEK 178 The following BLAST results are available for this feature:
BLAST of FC918175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918175 ID=FC918175; Name=FC918175; organism=Citrus clementina; type=EST; length=892bpback to top |