FC918218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC918218 vs. ExPASy Swiss-Prot
Match: OGG1_HUMAN (N-glycosylase/DNA lyase OS=Homo sapiens GN=OGG1 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 58/166 (34.94%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 214 WTPLNLTQSELSLPLTFPTGQTFRWKQTGPLQYTGPVGPHLISLKHLQNGDVCYHIHTSPSE-----PAAKSALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLA-SLGSHLGKVEGFEFHEFPSLERLS 693 W + +SEL L L P+GQ+FRW++ P ++G + + +L + C S+ P A+ + + ++L +L+ + + D F E+A+ G R+LRQDP+ECL F+CSSNNNIARIT MV+ L + G L +++ +H FPSL+ L+ Sbjct: 23 WASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALA 188
BLAST of FC918218 vs. ExPASy Swiss-Prot
Match: OGG1_MOUSE (N-glycosylase/DNA lyase OS=Mus musculus GN=Ogg1 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22 Identity = 56/166 (33.73%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 214 WTPLNLTQSELSLPLTFPTGQTFRWKQTGPLQYTGPVGPHLISLKHLQNGDVCYHIHTSPSEPAAKS-----ALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLA-SLGSHLGKVEGFEFHEFPSLERLS 693 W + +SEL L L +GQ+FRWK+ P ++G + + +L ++ C S+ + + L + + +SL +L+ +++ D F +A+ G R+LRQDP ECL F+CSSNNNIARIT MV+ L + G L +++ +H FP+L L+ Sbjct: 23 WASIPCPRSELRLDLVLASGQSFRWKEQSPAHWSGVLADQVWTLTQTEDQLYCTVYRGDDSQVSRPTLEELETLHKYFQLDVSLAQLYSHWASVDSHFQRVAQKFQGVRLLRQDPTECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPNLHALA 188
BLAST of FC918218 vs. ExPASy Swiss-Prot
Match: OGG1_RAT (N-glycosylase/DNA lyase OS=Rattus norvegicus GN=Ogg1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 54/166 (32.53%), Postives = 89/166 (53.61%), Query Frame = 1 Query: 214 WTPLNLTQSELSLPLTFPTGQTFRWKQTGPLQYTGPVGPHLISLKHLQNGDVCYHIHTSPSEPAAKS-----ALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLA-SLGSHLGKVEGFEFHEFPSLERLS 693 W + +SEL L L +GQ+FRW++ P ++G + + +L ++ C + + L + + +SL +L+ +++ D F +A+ G R+LRQDP ECL F+CSSNNNIARIT MV+ L + G L +++ +H FP+L L+ Sbjct: 23 WASIPCPRSELRLDLVLASGQSFRWREQSPAHWSGVLADQVWTLTQTEDQLYCTVYRGDKGQVGRPTLEELETLHKYFQLDVSLTQLYSHWASVDSHFQSVAQKFQGVRLLRQDPTECLFSFICSSNNNIARITGMVERLCQAFGPRLVQLDDVTYHGFPNLHALA 188
BLAST of FC918218 vs. ExPASy Swiss-Prot
Match: OGG1_YEAST (N-glycosylase/DNA lyase OS=Saccharomyces cerevisiae GN=OGG1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15 Identity = 57/181 (31.49%), Postives = 98/181 (54.14%), Query Frame = 1 Query: 211 KWTPLNLTQSELSLPLTFPTGQTFRW---KQTGPLQYTGPVGPH----LISLKHLQNGDVCYHIHTSP--SEPAAKSALLDFLNMGISLGELWEG-FSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLAS-LGSHLGKVEGFEFHEFPSLERL-SLFSEVELR 717 K+ L + +SEL L GQ+FRW ++ T +G ++ L+ + ++ + ++ A K+ L+ + + +SL L++ + SD FA+L+ G R+L Q+P E L+ F+CSSNNNI+RIT+M + L S G+ + ++G +H FP+ E L S +E +LR Sbjct: 4 KFGKLAINKSELCLANVLQAGQSFRWIWDEKLNQYSTTMKIGQQEKYSVVILRQDEENEILEFVAVGDCGNQDALKTHLMKYFRLDVSLKHLFDNVWIPSDKAFAKLSPQ--GIRILAQEPWETLISFICSSNNNISRITRMCNSLCSNFGNLITTIDGVAYHSFPTSEELTSRATEAKLR 182 The following BLAST results are available for this feature:
BLAST of FC918218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918218 ID=FC918218; Name=FC918218; organism=Citrus clementina; type=EST; length=725bpback to top |