FC918221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD2_HUMAN (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41 Identity = 84/168 (50.00%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE+GE +A G E+ + L NGCLCC+V+ + +R I L+ +KKGKFD+I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G++NEA Q+A AD I++NKTDL Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLM-QKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLAEEKPDGLINEATRQVALADAILINKTDL 207
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD1_HUMAN (COBW domain-containing protein 1 OS=Homo sapiens GN=CBWD1 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41 Identity = 84/168 (50.00%), Postives = 120/168 (71.43%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE+GE +A G E+ + L NGCLCC+V+ +R I L+ +KKGKFD+I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G++NEA Q+A AD I++NKTDL Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLM-QKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDL 207
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD1_MOUSE (COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.005e-41 Identity = 87/181 (48.07%), Postives = 125/181 (69.06%), Query Frame = 1 Query: 325 EDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 E+ D +TKIP TI+TG+LG+GKTTLLN+ILT +H ++IAVI NE+GE +A G E+ + L NGCLCC+V+ +R I L+ +KKGKFD+I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G+VNEA Q+A AD I++NKTDL Sbjct: 32 ENLDFITKIP------VTIVTGYLGAGKTTLLNYILTEQHNRKIAVILNEFGEGSAVEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLM-QKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDL 205
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD1_RAT (COBW domain-containing protein 1 OS=Rattus norvegicus GN=Cbwd1 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.902e-40 Identity = 82/168 (48.81%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP TI+TG+LG+GKTTLLN+ILT +H ++IAVI NE+GE +A G E+ + L NGCLCC+V+ + ++ I L+ +KKGKFD+I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G+VNEA Q+A AD I++NKTDL Sbjct: 40 KIPVTIVTGYLGAGKTTLLNYILTEQHNRKIAVILNEFGEGSAVEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLKAIENLM-QKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDL 206
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD6_HUMAN (COBW domain-containing protein 6 OS=Homo sapiens GN=CBWD6 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 84/168 (50.00%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE GE +A G E+ + L NGCLCC+V+ + +R I L+ +KKGKFD I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G++NEA Q+A AD I++NKTDL Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLM-QKKGKFDDILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDL 207
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD5_HUMAN (COBW domain-containing protein 5 OS=Homo sapiens GN=CBWD5 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 84/168 (50.00%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE GE +A G E+ + L NGCLCC+V+ + +R I L+ +KKGKFD I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G++NEA Q+A AD I++NKTDL Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLM-QKKGKFDDILLETTGLADPGAVTSMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDL 207
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: CBWD3_HUMAN (COBW domain-containing protein 3 OS=Homo sapiens GN=CBWD3 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 84/168 (50.00%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 364 RIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGA--EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +IP TIITG+LG+GKTTLLN+ILT +H KR+AVI NE GE +A G E+ + L NGCLCC+V+ + +R I L+ +KKGKFD I++ETTGLA+P + F+ + + +++ LDG++T+VD+K+ HL E KP G++NEA Q+A AD I++NKTDL Sbjct: 41 KIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLM-QKKGKFDDILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDL 207
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: YOG5_SCHPO (COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe GN=SPBC15D4.05 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.842e-35 Identity = 79/170 (46.47%), Postives = 122/170 (71.76%), Query Frame = 1 Query: 367 IPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEV-DIDGSLVAAKTTGAEDI----VLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDL 861 +P TI+TGFLG+GKT+LL IL +GKR+AV+ NE G+ D++ SL+ + G E++ V L+NGC+CCTV+ + ++ + E + ++KG+FD+IVIETTG+ANP P+ QTF+ +DA+ ++VKLDG+VT++D K+ L + G + QI++AD +I+NKTDL Sbjct: 61 VPVTILTGFLGAGKTSLLRSILENRNGKRVAVLMNEVGDSGDLERSLM--EDVGGEELYEEWVALSNGCMCCTVKDNGIKAL-EKIMRQKGRFDNIVIETTGIANPGPLAQTFWLDDALKSDVKLDGIVTVIDCKNIDNILKDESDIGFI-----QISHADCLILNKTDL 222
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: YJIA_ECOLI (Uncharacterized GTP-binding protein yjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 4.104e-35 Identity = 78/172 (45.35%), Postives = 109/172 (63.37%), Query Frame = 1 Query: 361 NRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEVDIDGSLVAAKTTGAEDIVLLNNGCLCCTVRGDLVRMISEL---VSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLXG 867 N I T++TGFLG+GKTTLL HIL +HG +IAVIENE+GEV +D L+ + T I L NGC+CC+ +L + +L + K +FD +VIE TG+A+P PIIQTF++ + + LDGV+ LVDA HA +++ A Q+ YADRI++ KTD+ G Sbjct: 2 NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRAT---QIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQ------FTIAQSQVGYADRILLTKTDVAG 164
BLAST of FC918221 vs. ExPASy Swiss-Prot
Match: YN8H_YEAST (Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae GN=YNR029C PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.973e-29 Identity = 71/185 (38.38%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 343 TKIPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEYGEV-DIDGSLVAAKTTGA-EDIVLLNNGCLCCTVRGDLVRMISELVSKKKGKFDHIVIETTGLANPAPIIQTFYAEDAIFNEVKLDGVVTLVDAKH-----------AGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTD 858 T + RIP +IITG+LGSGK+TLL I K+IAVI NE+G+ +I+ ++ + + ++ + L NGCLCC+++ V+ I ++V + GK D+I++ET+G+A+PAPI + F+ ++ + + V +DG++T++D +H A +H D+V +G + A Q+A ADRII+NK D Sbjct: 63 TDVHEKKRIPVSIITGYLGSGKSTLLEKIALKGADKKIAVILNEFGDSSEIEKAMTIKNGSNSYQEWLDLGNGCLCCSLKNIGVKAIEDMVERSPGKIDYILLETSGIADPAPIAKMFWQDEGLNSSVYIDGIITVLDCEHILKCLDDISIDAHWHGDKVGLEGNLTIAHFQLAMADRIIMNKYD 247 The following BLAST results are available for this feature:
BLAST of FC918221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918221 ID=FC918221; Name=FC918221; organism=Citrus clementina; type=EST; length=869bpback to top |