FC919326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 382.104 bits (980), Expect = 3.107e-107 Identity = 185/217 (85.25%), Postives = 202/217 (93.09%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVK 656 DPV+ +L ALSYDVVQKPYLKYFRFSADG KSPDVEI L PTMMHDFAITENFVV+PDQQVVFKL EMITGGSPV+YDKNK SRFGIL KNAKD+N + WI++P+ FCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNL+TG+STRR I+S+++QVNLEAGMVNRN LGRKTQFAYLA+AEPWPKVSGFAKVDL SGEV+ Sbjct: 320 DPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVEIPLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITGGSPVVYDKNKTSRFGILDKNAKDANAMRWIDAPECFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLRTGKSTRRPIISDAEQVNLEAGMVNRNKLGRKTQFAYLALAEPWPKVSGFAKVDLFSGEVQ 536 HSP 2 Score: 27.335 bits (59), Expect = 3.107e-107 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 656 KYFYGDNKYGGEP 694 KY YG+ K+GGEP Sbjct: 537 KYMYGEEKFGGEP 549
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 1.184e-103 Identity = 181/218 (83.03%), Postives = 196/218 (89.91%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESD-QVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVK 656 DP S ELFALSYDVV KPYLKYFRFS DG KSPDVEI L PTMMHDFAITENFVV+PDQQVVFKL EMI GGSPV+YDKNK +RFGIL K A+DS++I WI++PD FCFHLWNAWEEPETDE+VVIGSCMTP DSIFNE DE+LKSVLSEIRLNLKTGESTRR I+S D QVNLEAGMVNRN LGRKT+FAYLA+AEPWPKVSGFAKVDL++GEVK Sbjct: 301 DPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRGGSPVVYDKNKVARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDENLKSVLSEIRLNLKTGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDLTTGEVK 518 HSP 2 Score: 29.6462 bits (65), Expect = 1.184e-103 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 656 KYFYGDNKYGGEP 694 K+ YGDN+YGGEP Sbjct: 519 KHLYGDNRYGGEP 531
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 4.902e-102 Identity = 176/220 (80.00%), Postives = 198/220 (90.00%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKSIF 665 DPV+KELFALSYDVV+KPYLKYF+FS +G+KSPDVEI L PTMMHDFAITENFVVIPDQQVVFKL +M G SPV YD K SRFGIL +NAKD+++++W+ESP+TFCFHLWNAWE PETDE+VVIGSCMTPADSIFNECDE L SVLSEIRLNLKTG+STRR I+ S Q+NLEAGMVNRN LGRKT++AYLAIAEPWPKVSGFAKVDLS+GEVK+ F Sbjct: 291 DPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKSPVKYDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFNECDEQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLSTGEVKNHF 510 HSP 2 Score: 26.1794 bits (56), Expect = 4.902e-102 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 659 YFYGDNKYGGEP 694 +FYG KYGGEP Sbjct: 509 HFYGGKKYGGEP 520
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 360.918 bits (925), Expect = 2.416e-101 Identity = 174/217 (80.18%), Postives = 197/217 (90.78%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVK 656 DP ++ELFALSYDVV KPYLKYFRF++DG+KSPDVEI L PTM+HDFAITENFVVIPDQQVVF+L EMI GGSPV+YD+ KKSRFGIL KNAKD++ I WIE PD FCFHLWN+WEEPETDE+VVIGSCMTP DSIFNE DE+L+SVLSEIRLNLKTGESTRR ++SE QVNLEAGMVNRN LGRKT++AYLA+ EPWPKVSGFAKVDLS+GE++ Sbjct: 361 DPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRGGSPVVYDEKKKSRFGILNKNAKDASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGSCMTPPDSIFNEHDETLQSVLSEIRLNLKTGESTRRPVISE--QVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLSTGEIR 575 HSP 2 Score: 28.8758 bits (63), Expect = 2.416e-101 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 656 KYFYGDNKYGGEP 694 KY YG+ KYGGEP Sbjct: 576 KYIYGEGKYGGEP 588
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.885e-92 Identity = 162/217 (74.65%), Postives = 189/217 (87.10%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVK 656 DPV+KEL ALSYDVV+KPYLKYFRFS DG KSP++EI L PTM+HDFAITENFVVIPDQQVVFKL EMI+G SPV++D K SR GI+ K+A +++ IIW+ SP+TFCFHLWNAWE PET+EIVVIGSCM+PADSIFNE DESL+SVLSEIR+NL+T ++TRR +L D VNLE GMVNRN LGRKT+FA+LAIA PWPKVSGFAKVDL +GE+K Sbjct: 284 DPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELEIPLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFDGEKVSRLGIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFNERDESLRSVLSEIRINLRTRKTTRRSLLVNED-VNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGFAKVDLCTGEMK 499 HSP 2 Score: 27.7202 bits (60), Expect = 1.885e-92 Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 656 KYFYGDNKYGGEP 694 KY YG KYGGEP Sbjct: 500 KYIYGGEKYGGEP 512
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 322.783 bits (826), Expect = 2.699e-88 Identity = 152/216 (70.37%), Postives = 181/216 (83.80%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEV 653 DP + EL ALSYDV+++PYLKYF F DG KS DVEI L PTM+HDFAITEN VV+PD QVVFKLQEM+ GGSPV+ DK K SRFG+L K+A D++++ W++ PD FCFHLWNAWE+ T E+VVIGSCMTPADSIFNE DE L+SVL+EIRL+ +TG STRR +L S QVNLE GMVNRN LGR+T++AYLA+AEPWPKVSGFAKVDLS+GE+ Sbjct: 302 DPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRGGSPVVLDKEKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTEIRLDARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLSTGEL 517 HSP 2 Score: 23.483 bits (49), Expect = 2.699e-88 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 656 KYFYGDNKYGGEP 694 K+ YG+ ++GGEP Sbjct: 519 KFEYGEGRFGGEP 531
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.976e-70 Identity = 132/220 (60.00%), Postives = 168/220 (76.36%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDE----IVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEV 653 D + +L LSY+V++KP+L+Y +F+ G K+ DVEI LP PTM+HDFAITENFVVIPDQQ+VFKL EMI GGSPVIY K K +RFG+L+K +DI W++ PD FCFHLWNAWEE T+E IVVIGSCM+P D+IF+E E + LSEIRLN++T ES R+ I++ VNLEAG +NR+ +GRK+QF Y+AIA+PWPK SG AKVD+ +G V Sbjct: 280 DATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKEKMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEE-RTEEGDPVIVVIGSCMSPPDTIFSESGEPTRVELSEIRLNMRTKESNRKVIVT---GVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSGIAKVDIQNGTV 495 HSP 2 Score: 21.1718 bits (43), Expect = 5.976e-70 Identity = 6/13 (46.15%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 656 KYFYGDNKYGGEP 694 ++ YG +++GGEP Sbjct: 497 EFNYGPSRFGGEP 509
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: ZCD_CROSA (Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32 Identity = 77/212 (36.32%), Postives = 122/212 (57.55%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKS-PDVEIH-LPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVD 635 DPV+ E F+ SY +Q PY+ Y R+ DG KS PDV I P+ +HDFAITE++ V PD Q+V K E++ G + D K R G+L + A +++ W + P H+ NAWEE + +V++ ++P ++ + D L + R+ LK+G +R + +E NL+ G+++R GRK+++AYL + +P PK+ G KVD Sbjct: 66 DPVTGETFSFSYGPIQ-PYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEHYAVFPDIQIVMKPAEIVRGRRMIGPDLEKVPRLGLLPRYATSDSEMRWFDVPGFNMVHVVNAWEEEGGEVVVIVAPNVSPIENAIDRFD-LLHVSVEMARIELKSGSVSRTLLSAE----NLDFGVIHRGYSGRKSRYAYLGVGDPMPKIRGVVKVD 271
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.043e-29 Identity = 80/218 (36.70%), Postives = 120/218 (55.05%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVI-YDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFN------ECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDL 638 DP + E+F+ Y PY+ Y S DG V I + P MMHDFAITEN+ V D ++F+ +EM+ + + +D KK+RFG+L + AKD I W E P+ F FH NAWE E DE+V+I +C + N E E+ + L E+R N+KTGE++++++ + + ++ VN N GRK ++ Y + KV+G K DL Sbjct: 228 DPFTGEMFSFGY-AHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEQHIRWFELPNCFIFHNANAWE--EEDEVVLI-TCRLQNPKLDNVGGTVQEKLENFSNELYEMRFNMKTGEASQKKLSAST----VDFPRVNENYTGRKQRYVYGTTLDSIAKVTGIIKFDL 437
BLAST of FC919326 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 79/217 (36.41%), Postives = 116/217 (53.46%), Query Frame = 3 Query: 6 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVI-YDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPAD-----SIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDL 638 DP + E+F Y PY+ Y S DG V I +P MMHDFAITEN+ + D + F+ +EM+ GG + +D KK+RFG+L + AKD + I W E P+ F FH NAWE E DE+V+I + D E E+ K+ L E+R N+KTG ++++Q+ + ++ +N + RK ++ Y I + KV G K DL Sbjct: 230 DPFTDEMFTFGY-AHTPPYVTYRVISKDGVMRDPVPITIPASVMMHDFAITENYSIFMDLPLYFQPKEMVKGGKLIFSFDATKKARFGVLPRYAKDDSLIRWFELPNCFIFHNANAWE--EGDEVVLITCRLENPDLDMVNGAVKEKLENFKNELYEMRFNMKTGAASQKQLSVSA----VDFPRINESYTTRKQRYVYGTILDNITKVKGIIKFDL 439 The following BLAST results are available for this feature:
BLAST of FC919326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC919326 ID=FC919326; Name=FC919326; organism=Citrus clementina; type=EST; length=696bpback to top |