FC920292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920292 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43 Identity = 93/218 (42.66%), Postives = 133/218 (61.01%), Query Frame = 2 Query: 44 METIRSFKGYGKVDELEQQAFRRKTRKRXXXXXXXXXXXXXXXXXXXXXXXXHKNKNDSSSDNMPATQLTPAASLKAVCSVTRYPXXXXXXXXXXXXXNVTKDPEILFKLSLQVAMNELGKLQNYPSKLKQQTKDPQVIEALKVCETLFDDALDHVNESLSSMQVGSGEKLLSSKKIQDLKTWLSTSITDQXTCLDALQEL--NVSHYQNSNILKDIR 691 M+++ SFKGYGKVDE + A ++KTRKR HKNKN+S+ P +LTP+ SLKA+CSVTR+P N T DPE LFKLSL+V ++EL + + P KL ++T+D ++ AL+VC L +DALD +N+++S++ +K LSS KI+DLKTWLS ++TD TC D+L EL N + Y NS I ++++ Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRLLLLSISVVVLIAVIIAAVVATVVHKNKNESTPS--PPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTT-DPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLK 215
BLAST of FC920292 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.790e-40 Identity = 92/205 (44.88%), Postives = 132/205 (64.39%), Query Frame = 2 Query: 44 METIRSFKGYGKVDELEQQAFRRKTRKRXXXXXXXXXXXXXXXXXXXXXXXXHKNKNDS--SSDNMPATQLTPAASLKAVCSVTRYPXXXXXXXXXXXXXNVTKDPEILFKLSLQVAMNELGKLQNYPSKLKQQT-KDPQVIEALKVCETLFDDALDHVNESLSSMQVGSGEKLLSSKKIQDLKTWLSTSITDQXTCLDALQELN 649 M+TI+SFKGYGKV+ELEQQA+ +KTRKR H ++S SSD++P T+L+PAASLKAVC TRYP N T DPE+LFKLSL+VA++E L ++PSKL+ +D ++ +A+ VC ++F DALD +N+S+S++ +G ++ SS + +++TWLS ++TDQ TCLDA+ ELN Sbjct: 1 MDTIKSFKGYGKVNELEQQAYEKKTRKRLIIIAVSSIVLIAVIIAAVAGVVIHNRNSESSPSSDSVPQTELSPAASLKAVCDTTRYPSSCFSSISSLPESNTT-DPELLFKLSLRVAIDE---LSSFPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAG-RIASSASVSNVETWLSAALTDQDTCLDAVGELN 200
BLAST of FC920292 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37 Identity = 91/215 (42.33%), Postives = 122/215 (56.74%), Query Frame = 2 Query: 44 METIRSF-KGYGKVDELEQQAFRRKTRKRXXXXXXXXXXXXXXXXXXXXXXXXHKNKNDSSSDNMPAT-QLTPAASLKAVCSVTRYPXXXXXXXXXXXXXNVTKDPEILFKLSLQVAMNELGKLQNYPSKLKQQTKDPQVIEALKVCETLFDDALDHVNESLSSMQVGSGEKLLSSKKIQDLKTWLSTSITDQXTCLDALQELNVSHYQNSNILK 682 M+T++S KGYGKVDE + A +RKTRKR H K +S + +LTPAASLK VCSVT YP N T DPE++F+LSLQV ++EL + P KL ++T D + AL VCE L D A+D VNE++S+M+V G+K+L++ I DL TWLS ++T TCLDAL E +SH ++ LK Sbjct: 1 MDTVKSINKGYGKVDETQDLALKRKTRKRLYQIGISVAVLVAIIISSTVTIAIHSRKGNSPHPTPSSVPELTPAASLKTVCSVTNYPVSCFSSISKLPLSNTT-DPEVIFRLSLQVVIDELNSIVELPKKLAEETDDEGLKSALSVCEHLLDLAIDRVNETVSAMEVVDGKKILNAATIDDLLTWLSAAVTYHGTCLDALDE--ISHTNSAIPLK 212 HSP 2 Score: 135.191 bits (339), Expect = 3.216e-31 Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = 2 Query: 245 QLTPAASLKAVCSVTRYPXXXXXXXXXXXXXNVTKDPEILFKLSLQVAMNELGKLQNYPSKLKQQTKDPQVIEALKVCETLFDDALDHVNESLSSM-QVGSGEKLLSSKKIQDLKTWLSTSITDQXTCLDALQEL--NVSHYQNSNI 676 +LTPAASL+ VCSVTRYP N T DPE LF+LSLQV +NEL + P KL ++T D ++ +L VC +F+DA+D VN+++S+M +VG G+K+L S I +++TWLS ++TD TCLDAL EL N + Y NS I Sbjct: 264 KLTPAASLRNVCSVTRYPASCVSSISKLPSSNTT-DPEALFRLSLQVVINELNSIAGLPKKLAEETDDERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTCLDALDELSQNKTEYANSPI 409 HSP 3 Score: 109.383 bits (272), Expect = 1.890e-23 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 251 TPAASLKAVCSVTRYPXXXXXXXXXXXXXNVTKDPEILFKLSLQVAMNELGKLQNYPSKLKQQTKDPQVIEALKVCETLFDDALDHVNESLSSMQ--VGSGEKLLSSKKIQDLKTWLSTSITDQXTCLDALQELN 649 TP++ L+ VC+VT YP T DP++LF+LSLQV +EL + P KL ++T D + AL VC +FD A+D VN+++SS+ + G+K L+S I DL TWLS+++TD TC D L E N Sbjct: 454 TPSSVLRTVCNVTNYPASCISSISKLPLSKTTTDPKVLFRLSLQVTFDELNSIVGLPKKLAEETNDEGLKSALSVCADVFDLAVDSVNDTISSLDEVISGGKKNLNSSTIGDLITWLSSAVTDIGTCGDTLDEDN 588 The following BLAST results are available for this feature:
BLAST of FC920292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920292 ID=FC920292; Name=FC920292; organism=Citrus clementina; type=EST; length=691bpback to top |