FC920317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 56/189 (29.63%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 118 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQS---TKMLGIINERINFQFL 675 V YL KKG+S E L+ E + S I E+ P Y Y+ LR W SSL+LYK EL +L+P+F+H +++L+++ H + A+ F+ F++DH +H D++ L+ + PSH+ E A R +K + + +++LLL +L + S + ++ +IN+ I+ + Sbjct: 16 VLDYLAKKGYSRTEAMLRLEASGSGVSVEEKLKSI----------------EETPDAYTHTYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAAKQFYELFKDDHTDLHDFDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFENVSNGGSIIIKLINQHIDIHIV 188
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF5_ENCCU (Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon cuniculi GN=TAF5 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.822e-19 Identity = 40/126 (31.75%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 292 QDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQ 669 + Y L++W SLDL+K++LL +LYP+FIH + DL+ + EA+ FF +R DH ++++ E + + H+ E FA++ ++SK ++ + +Y+++LL+ +L + T +L I+N+ ++ + Sbjct: 20 ETSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDH-YNKSEEIKQFESIYTVQHIHENNFAYTFKNSKYHLSMGRYAFDLLINFLEERNLTYILKILNQHLDIK 144
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF73_SCHPO (Transcription initiation factor TFIID subunit taf73 OS=Schizosaccharomyces pombe GN=taf73 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.889e-18 Identity = 62/192 (32.29%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 112 EFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ---STKMLGIINERINFQFLL 678 + V YL KKG+S E L+ EI SS P E + SE+ Y Y LR W +LDLYK +L VLYP+F+H ++DL+ K + A FF +FR +HE++H D++ L + S +EE+E A R +K I + +++LL+Q+L + + S ++ ++N+ I+ + + Sbjct: 17 KIVLDYLFKKGYSRTEAMLRLEI----SSVGAIP------EEQQDWHIGASET------YVQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEVLHGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIRLLNQYIDIKITM 192
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17 Identity = 62/216 (28.70%), Postives = 105/216 (48.61%), Query Frame = 1 Query: 118 VATYLKKKGFSEAENALQAEIQRNKSSNN-----------------------------TNPIDILN--DPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQS---TKMLGIINERIN 663 V YL KKG+ E L+AE R + N +NP ++ + D E E + P Y YS L++W SSL++YK EL +++YP+FI+ F++LVAK + AR FF+ F D + H ++ +L V S H++E E A + + K I + + + LLL +L++ +S + ++ +IN+ ++ Sbjct: 64 VLEYLNKKGYHRTEAMLRAESGRTLTPQNKQSPANTKTGKFPEQSSIPPNPGKTAKPISNPTNLSSKRDAEGGIVSSGRLEGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVY-ARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLD 278
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.194e-17 Identity = 44/149 (29.53%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 214 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERI 660 + + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV H EA++FF F D E + DL+ L + H++ E R SK ++I + SY+LL ++L + Q+ ++ I+ E + Sbjct: 190 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHL 337
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.172e-17 Identity = 44/149 (29.53%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 214 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERI 660 + + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV H EA++FF F D E + DL+ L + H++ E R SK ++I + SY+LL ++L + Q+ ++ I+ E + Sbjct: 191 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRIYRDSYQLLKRHLQEKQNNQIWNIVQEHL 338
BLAST of FC920317 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 36/144 (25.00%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 235 ELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINF 666 EL+KF + Y+ Y +LR++ SLD+YKHEL VLYP+ + + ++A G ++A+ F ++ D + ++ L L + P L E + ++ K I++ + S+ L +++ + + I+++ ++F Sbjct: 101 ELAKFI---DDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHSLFKRHIQDRRQEVVADIVSKYLHF 241 The following BLAST results are available for this feature:
BLAST of FC920317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920317 ID=FC920317; Name=FC920317; organism=Citrus clementina; type=EST; length=768bpback to top |