FC920345

Overview
NameFC920345
Unique NameFC920345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:141..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 6.444e-96
Identity = 165/201 (82.09%), Postives = 180/201 (89.55%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+EKTG++PDP STDN EFQI L+II++GL+ DP KYH MKERLVGVSEE
Sbjct:    5 VEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKERLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 1.875e-95
Identity = 168/201 (83.58%), Postives = 179/201 (89.05%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K++SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ+H              WKGETLQEYWWCTE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K G LPDP+STDNAEFQI LTIIRDGLK+DP KY  MKERLVGVSEE
Sbjct:    5 VEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQEHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKNGALPDPSSTDNAEFQIVLTIIRDGLKSDPTKYTRMKERLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 7.125e-95
Identity = 164/201 (81.59%), Postives = 179/201 (89.05%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K+A+GRE+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EFGPSQPFKGA+ITGSLHMTIQT VLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K+G +PDPASTDNAEFQI L+IIRDGLK+DPMKYH MK+RLVGVSEE
Sbjct:    5 VEKTAAGREYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTGVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSCAVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKSGAIPDPASTDNAEFQIVLSIIRDGLKSDPMKYHKMKDRLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 4.618e-94
Identity = 163/201 (81.09%), Postives = 178/201 (88.56%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+I L+II++GLK DP +YH MK+R+VGVSEE
Sbjct:    5 VEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSIIKEGLKTDPKRYHKMKDRVVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 7.877e-94
Identity = 162/201 (80.60%), Postives = 176/201 (87.56%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+ + SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CR EFGPSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC+E+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEE++EKTG+LPDP+STDNAE QI LTIIRDGLK DP +Y  MK R+VGVSEE
Sbjct:    5 VETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCSERALDWGPGGGPDLIVDDGGDVTLLIHEGVKAEEVFEKTGQLPDPSSTDNAEMQIVLTIIRDGLKTDPKRYQKMKTRIVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.029e-93
Identity = 164/201 (81.59%), Postives = 175/201 (87.06%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+ LTII++ LK DP+KY  MKERLVGVSEE
Sbjct:    5 VEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTIIKESLKTDPLKYTKMKERLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.029e-93
Identity = 164/201 (81.59%), Postives = 175/201 (87.06%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+ LTII++ LK DP+KY  MKERLVGVSEE
Sbjct:    5 VEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTIIKESLKTDPLKYTKMKERLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.344e-93
Identity = 165/201 (82.09%), Postives = 174/201 (86.57%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ L+WG GGGPDLIVDDGGDATLLIHEGVKAEE YEK GK+PDPASTDNAEFQI L +IRD L  DP KY  MKERLVGVSEE
Sbjct:    5 VEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERCLEWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGKIPDPASTDNAEFQIVLGLIRDSLSVDPKKYRRMKERLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 2.993e-93
Identity = 163/201 (81.09%), Postives = 173/201 (86.07%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K++SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWG GGGPDLIVDDGGDATLLIHEGVKAEE YEK G +PDP STDN EFQ+ L +IRD LK DP +YH MK RLVGVSEE
Sbjct:    5 VEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGTIPDPTSTDNPEFQLVLGLIRDSLKVDPKRYHKMKTRLVGVSEE 205
[Close]
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.486e-92
Identity = 161/201 (80.10%), Postives = 174/201 (86.57%), Query Frame = 1 
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V+K++SGRE+KVKD+SQADFGRLEIELAEVEMPGL++C  EFGPSQP KGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+ K G  PDP STDN EFQI L+II+DGL+ DP KYH MKERLVGVSEE
Sbjct:    5 VEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSIIKDGLQVDPKKYHKMKERLVGVSEE 205
The following BLAST results are available for this feature:
BLAST of FC920345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH1_ARATH6.444e-9682.09Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_CATRO1.875e-9583.58Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_PETCR7.125e-9581.59Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_LUPLU4.618e-9481.09Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MEDSA7.877e-9480.60Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_TOBAC1.029e-9381.59Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY1.029e-9381.59Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_PHASS1.344e-9382.09Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_MESCR2.993e-9381.09Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH2_ARATH1.486e-9280.10Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionC32007B04EF RVDevelop1 Citrus clementina cDNA clone C32007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920345 ID=FC920345; Name=FC920345; organism=Citrus clementina; type=EST; length=604bp
GTCCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCA
GGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGG
GGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGA
GCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCAT
CGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACA
TCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCC
TCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCAC
GGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAA
CGCCGAGTTTCAGATTGCTTTGACTATCATTAGAGATGGGTTGAAGGCCG
ATCCCATGAAGTACCACACAATGAAGGAAAGATTAGTTGGTGTTTCCGAA
GAAA
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