FC920589

Overview
NameFC920589
Unique NameFC920589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length603
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14164 contig Ccv1_Contig14164:1..603. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920589 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.102e-47
Identity = 89/161 (55.28%), Postives = 124/161 (77.02%), Query Frame = 3
Query:  120 KSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSYKILDIQDLFMKSTLDSIFKVAFGV 602
            ++  K+  Y P+ GT+ N  +NF RLH Y TD A ++ T+R++ P  S V+++DP NVE++LKTNF NY KG++NY I+KDLLGDGIF VDG+KWR+QRK++S EF++KVL+DFSS  F  NAAKLA +L++AA     +++QDLFM+S+LDSI KV FG+
Sbjct:   28 RNWRKKGVYPPVVGTMLNHAINFERLHDYHTDQAQRYKTFRVVYPTCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFSSGVFCNNAAKLANILAQAAKLNLSVEMQDLFMRSSLDSICKVVFGI 188          
BLAST of FC920589 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 68/169 (40.24%), Postives = 101/169 (59.76%), Query Frame = 3
Query:  105 KTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDL--AAKHGTYRLLGPFRS-EVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAA-KLAQLLSEAANSYKILDIQDLFMKSTLDSIFKVAFG 599
            KT +  +     K +PI G+ F+ L NF+R   + +D+       T+ L  PF + +V+++ PA V+++L+TNF  YGKG   Y  + D LGDGIF  DGE W+ QR+ISSHEF+T+ LR F         + +L  +LS+A+NS   LD QD+  + T D+I  +AFG
Sbjct:   32 KTPSSTTNTPIPKSYPIFGSAFSLLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNSQTTLDFQDILQRLTFDNICMIAFG 200          
BLAST of FC920589 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 58/166 (34.94%), Postives = 92/166 (55.42%), Query Frame = 3
Query:  132 KQKKYHPIGGTVFNQLLNFNRLHHYMTD-LAAKHGTYRLL---GPFRSE-----VYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKN-AAKLAQLLSEAANSYKILDIQDLFMKSTLDSIFKVAFG 599
            K  +  P+ G++   +   +R+H ++T+ L A  GTY+      PF ++       + DP N+E+MLKT FDNY KG    ++  D LG GIF  DG+ W  QRK ++ EF+T+ LR        +    +   +L  A N+Y+ +D+QDL ++ T D+I  +AFG
Sbjct:   28 KGPRVWPVLGSLPGLIEQRDRMHDWITENLRACGGTYQTCICAVPFLAKKQGLVTVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPVDLQDLILRLTFDNICGLAFG 193          
BLAST of FC920589 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19
Identity = 50/157 (31.85%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  141 KYHPIGGTVFNQLLNFNRLHHYMTDLA--AKHGTYRLLGPF-RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDF-SSAAFRKNAAKLAQLLSEAANSYKILDIQDLFMKSTLDSIFKVAFG 599
            K +P+ G+  +   N +R   +++D+   +   T++L G   + ++ + +P+ V+++LK  F NY KG+   + L D LG GIF  +G  W+ QR+++SHEF+TK +R+F       +   +L  +L+ +  +  ILD QD+  + T D+I  +AFG
Sbjct:   49 KSYPLIGSYLSFRKNLHRRIQWLSDIVQISPSATFQLDGTLGKRQIITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSSTQTNNILDFQDILQRFTFDNICNIAFG 205          
BLAST of FC920589 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 61/164 (37.20%), Postives = 92/164 (56.10%), Query Frame = 3
Query:  141 KYHPIGGTVFNQLLNFNRLHHYMTD-LAAKHGTYR---LLGPFRSEVY-----SSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAK--LAQLLSEAANSYKILDIQDLFMKSTLDSIFKVAFG 599
            K  P  G++   + N +R+H ++ D L A  GTY+   ++ PF ++       +  P NVE++LKT FDNY KG    +   DLLG GIF  DG+ W  QRK ++ EF+T+ LR  + A +     K  L  +L  A  + K +D+QDLF++ T D+I  + FG
Sbjct:   34 KVLPFVGSLPYLIANRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQ-AMARWVNGTIKNRLWLILDRAVQNNKPVDLQDLFLRLTFDNICGLTFG 196          
The following BLAST results are available for this feature:
BLAST of FC920589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C04C1_PINTA1.102e-4755.28Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
C94A2_VICSA2.822e-2740.24Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A2_ARATH1.270e-1934.94Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C94A1_VICSA3.695e-1931.85Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C86A1_ARATH1.834e-1837.20Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
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Properties
Property NameValue
Genbank descriptionC32010D07EF RVDevelop1 Citrus clementina cDNA clone C32010D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920589 ID=FC920589; Name=FC920589; organism=Citrus clementina; type=EST; length=603bp
AAAAAAAAAGAGGGAGTGATAATTCCATGGATTTCCTCTCAATCCCTTTC
TCGTTCAAAGCCTTAGCTATTGCTCTTGCAATTCTTGTTGTTCAAATCGT
CACAAAAACACTGACGCAAAAGAGTGGCAATAAACAAAAGAAGTACCATC
CGATTGGCGGGACAGTGTTTAACCAGCTACTAAATTTCAATAGATTACAC
CATTACATGACAGATCTTGCTGCCAAGCATGGGACTTACAGACTGCTGGG
CCCTTTTAGAAGTGAAGTTTACAGTTCCGACCCGGCCAACGTTGAATACA
TGCTTAAAACAAATTTTGATAATTATGGCAAGGGAAGTTACAATTACAGC
ATCCTCAAGGATTTACTTGGTGATGGGATTTTTACTGTTGACGGCGAAAA
GTGGCGAGAACAGAGAAAGATATCAAGCCACGAGTTCTCAACAAAGGTGC
TCAGAGATTTTAGCAGCGCGGCCTTTAGAAAAAATGCGGCAAAGCTTGCT
CAACTACTTTCTGAAGCTGCAAATTCCTACAAGATATTGGACATTCAAGA
CTTGTTTATGAAATCAACCTTAGATTCGATATTTAAAGTGGCGTTTGGAG
TTG
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