FC920742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920742 vs. ExPASy Swiss-Prot
Match: SCS2_YEAST (Vesicle-associated membrane protein-associated protein SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 127 LDIQPLELKFTFEVKKQSTCVIQLGNKSDQCVAFKVKTTSPKKYCVRPNVSIIKP-KAISDFTVTMQAQRVAPPDLQCKDKFLIQGVVVPF---GTFDEDITSDMFAKDSGKYVEEKKLRVILMSPPQSPVLLPRNGELKQDSSPETSLQKDRALSGVEN 594 ++I P L + + +QST + N SDQ +AFKVKTT+PK YCVRPN +++ P + I + + D +C+DKFL+ + P+ G D+ SD+ A+ + + +K L+SP P E K+ P + + + V N Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKVKYLISPDVHPAQNQNIQENKETVEPVVQDSEPKEVPAVVN 163
BLAST of FC920742 vs. ExPASy Swiss-Prot
Match: YH75_SCHPO (Vesicle-associated membrane protein-associated protein C16G5.05c OS=Schizosaccharomyces pombe GN=SPBC16G5.05c PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 145 ELKFTFEVKKQSTCVIQLGNKSDQCVAFKVKTTSPKKYCVRPNVSIIKPKAISDFTVTMQAQRVAP-PDLQCKDKFLIQGVVVPFGTFDEDITSDMF-----AKDSGKYVEEKKLRVILMSPPQSPVLLPRNGELKQDSSPETSLQKDRALS 582 EL F S +I + N + + V FKVKTT+PK YCVRPN I+PK+ + V +QA + P PD +C+DKFLIQ + + G D + + G+ + ++K+R + S Q P + E S+P S++ L+ Sbjct: 8 ELFFYPPFTTMSKELISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAI--GDADTSNVENYHEFWTEMEKQGRSIFDRKIRCV-YSTKQPPQSADKQVENTSTSNPPVSVEGSENLA 156
BLAST of FC920742 vs. ExPASy Swiss-Prot
Match: VAPB_HUMAN (Vesicle-associated membrane protein-associated protein B/C OS=Homo sapiens GN=VAPB PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 118 EELLDIQPL-ELKFTFEVKKQSTCVIQLGNKSDQCVAFKVKTTSPKKYCVRPNVSIIKPKAISDFTVTMQAQRVAPPDLQCKDKFLIQGVVVPFGTFDEDITSDMFAKDSGKYVEEKKLRVILMSPPQS 501 E++L ++P ELKF T ++LGN +D+ V FKVKTT+P++YCVRPN II A + +V +Q P + + K KF++Q + P T D + ++ + + + + KLR + P ++ Sbjct: 5 EQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNE-KSKHKFMVQSMFAPTDTSDMEA---VWKEAKPEDLMDSKLRCVFELPAEN 129
BLAST of FC920742 vs. ExPASy Swiss-Prot
Match: VAPB_BOVIN (Vesicle-associated membrane protein-associated protein B OS=Bos taurus GN=VAPB PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 118 EELLDIQPL-ELKFTFEVKKQSTCVIQLGNKSDQCVAFKVKTTSPKKYCVRPNVSIIKPKAISDFTVTMQAQRVAPPDLQCKDKFLIQGVVVPFGTFDEDITSDMFAKDSGKYVEEKKLRVILMSPPQS 501 E++L ++P ELKF T ++LGN +D+ V FKVKTT+P++YCVRPN II A + +V +Q P + + K KF++Q + P T D + ++ + + + + KLR + P ++ Sbjct: 5 EQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNE-KSKHKFMVQSMFAPTDTSDMEA---VWKEAKPEDLMDSKLRCVFELPAEN 129
BLAST of FC920742 vs. ExPASy Swiss-Prot
Match: VAPB_PIG (Vesicle-associated membrane protein-associated protein B OS=Sus scrofa GN=VAPB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 43/129 (33.33%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 118 EELLDIQPL-ELKFTFEVKKQSTCVIQLGNKSDQCVAFKVKTTSPKKYCVRPNVSIIKPKAISDFTVTMQAQRVAPPDLQCKDKFLIQGVVVPFGTFDEDITSDMFAKDSGKYVEEKKLRVILMSPPQS 501 E++L ++P ELKF T ++LGN +D+ V FKVKTT+P++YCVRPN II A + +V +Q P + + K KF++Q + P T D + + + + + + KLR + P ++ Sbjct: 5 EQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQPFDYDPNE-KSKHKFMVQSMFAPADTSDMEAA---WKEAKPEDLMDSKLRCVFELPAEN 129 The following BLAST results are available for this feature:
BLAST of FC920742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920742 ID=FC920742; Name=FC920742; organism=Citrus clementina; type=EST; length=693bpback to top |