FC921078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS143_ARATH (40S ribosomal protein S14-3 OS=Arabidopsis thaliana GN=RPS14C PE=2 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 2.172e-58 Identity = 116/139 (83.45%), Postives = 123/139 (88.49%), Query Frame = 3 Query: 69 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 MS+RKT+EPK ENVTLGPAVR+GE VFGV H+FASFNDTFIHVTDLS RETLVRITGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRA AQSALRALARSGMKIGRIEDVTPIPTDST Sbjct: 1 MSKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS141_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.704e-58 Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 3 Query: 69 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 MSRRKTREPKEENV LGP VR+GE VFGVAHIFASFNDTFIHVTDLS RETLVRITGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA AQSALRALARSGMKIGRIEDVTP+PTDST Sbjct: 1 MSRRKTREPKEENV-LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDST 138
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS142_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 6.319e-58 Identity = 118/137 (86.13%), Postives = 123/137 (89.78%), Query Frame = 3 Query: 75 RRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 R+KTREPKEENV LGPAVR+GEHVFGVAHIFASFNDTFIHVTDLS RETLVRITGGMKVKADRDESSPYAAMLA+QDV+QRCKELGITALHIKLRA AQSALRALARSGMKIGRIEDVTP+PTDST Sbjct: 4 RKKTREPKEENV-LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDST 139
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS142_ARATH (40S ribosomal protein S14-2 OS=Arabidopsis thaliana GN=RPS14B PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57 Identity = 115/139 (82.73%), Postives = 122/139 (87.77%), Query Frame = 3 Query: 69 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 MS+RKT+EPK E VTLGP+VR+GE VFGV HIFASFNDTFIHVTDLS RETLVRITGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRA AQSALRALARSGMKIGRIEDVTPIPTDST Sbjct: 1 MSKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS14_LUPLU (40S ribosomal protein S14 OS=Lupinus luteus GN=RPS14 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 6.986e-57 Identity = 117/139 (84.17%), Postives = 120/139 (86.33%), Query Frame = 3 Query: 69 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 MSRRK R+ KEE VTLGPAV DGEHVFGVA IFASFNDTFIHVTDLS RETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRA AQSALRALARSGMKIGRIEDVTPIP+DST Sbjct: 1 MSRRKVRDTKEETVTLGPAVSDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGRGAQSALRALARSGMKIGRIEDVTPIPSDST 139
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS141_ARATH (40S ribosomal protein S14-1 OS=Arabidopsis thaliana GN=RPS14A PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 9.124e-57 Identity = 114/139 (82.01%), Postives = 122/139 (87.77%), Query Frame = 3 Query: 69 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 MS+RKT+EPK + VTLGP+VR+GE VFGV HIFASFNDTFIHVTDLS RETLVRITGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRA AQSALRALARSGMKIGRIEDVTPIPTDST Sbjct: 1 MSKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS14_CHLRE (40S ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 5.181e-52 Identity = 106/135 (78.52%), Postives = 115/135 (85.19%), Query Frame = 3 Query: 81 KTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 K E +E V+LGP VR+GEHVFGVAHIFASFNDTF+HVTDLS RET+ R+TGGMKVKADRDESSPYAAMLAAQDV+Q+CKELGITALHIKLRA AQSALRALAR+GMKIGRIEDVTPIPTDST Sbjct: 8 KGDEAPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDST 142
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS14_MOUSE (40S ribosomal protein S14 OS=Mus musculus GN=Rps14 PE=2 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 1.507e-51 Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 3 Query: 69 MSRRKTREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLS +ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA AQSALRALARSGMKIGRIEDVTPIP+DST Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS14_HUMAN (40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 1.507e-51 Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 3 Query: 69 MSRRKTREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLS +ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA AQSALRALARSGMKIGRIEDVTPIP+DST Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
BLAST of FC921078 vs. ExPASy Swiss-Prot
Match: RS14_CRIGR (40S ribosomal protein S14 OS=Cricetulus griseus GN=RPS14 PE=2 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 1.507e-51 Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 3 Query: 69 MSRRKTREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLS-RETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 482 M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLS +ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA AQSALRALARSGMKIGRIEDVTPIP+DST Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140 The following BLAST results are available for this feature:
BLAST of FC921078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921078 ID=FC921078; Name=FC921078; organism=Citrus clementina; type=EST; length=516bpback to top |