FC921134

Overview
NameFC921134
Unique NameFC921134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.507e-75
Identity = 148/234 (63.25%), Postives = 172/234 (73.50%), Query Frame = 2
Query:    5 KPQVHVPRVKLGSQGLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDKIQLATKFGCFMLDGVSI----GVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFF-AGKAVVESLPSE 691
            K    VPR+KLGSQGLEVS  G GC G+S  Y  P        +I    N GITL DTSDVYG  H NEI++GKALK   R+++ LATKFG  + D         V G P YVR  CEASLKRLD+D IDLYYQHRVDT V IE T+GELKKLVEEGK+KYIGLSEASA TIRRAHAVHPITAVQ+E+SLW+R++E++IIP CRELGIGIVAYSPLGRGF  +G  ++E + +E
Sbjct:    3 KEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYG-PHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNE 235          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.194e-74
Identity = 144/227 (63.44%), Postives = 168/227 (74.01%), Query Frame = 2
Query:   14 VHVPRVKLGSQGLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDKIQLATKFGCFMLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFF-AGKAVVESLPSE 691
            V VPR+KLGSQGLEVS  G GC G+S  Y  P        +I    + G+T  DTSDVYG  H NE+++GKAL+   R+K++LATKFG    DG    + G P YVR  CE S KRL VD IDLYYQHR+D  V IE T+GELKKLVEEGKIKYIGLSEASA TIRRAHAVHPITAVQ+E+SLW+R+ E+DIIP CRELGIGIVAYSPLGRGFF +G  +V+SL  +
Sbjct:    6 VSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYG-PHTNEVLLGKALQGGVREKVELATKFGVSFADGKR-EIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQ 230          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.239e-41
Identity = 102/219 (46.58%), Postives = 133/219 (60.73%), Query Frame = 2
Query:   20 VPRVKLGSQGLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDK-IQLATKFGCFMLDGVS-IGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIED---DIIPLCRELGIGIVAYSPLGRGFFAG 661
            +P  K+G+    V  +GFGC GL  +Y  P S E   +++    + G T +D+SD+YG    NE  +G+  KQ  R K I LATKFG         + +   P+Y+ K  + SLKRL +D IDLYY HR      IE  MG LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+EYS ++ EIE     ++  CRE  I IV Y+PLGRGF  G
Sbjct:    3 IPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFGA-NEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTG 217          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29
Identity = 75/211 (35.55%), Postives = 113/211 (53.55%), Query Frame = 2
Query:   35 LGSQGLEVSRLGFGCGGLSGIYNKP-LSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDKIQLATKFGCFMLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGK 664
            LG   L+V R+GFG   + G    P L+ E G  +++   + G+   DT+ +YG+    E++     ++  R+++ +ATK     +DG SI +  S E++R   E SLKRL  DYIDLYY H  D    + +  G LK+L +EGKIK IG S      ++  +A   +   Q EYSL  R+ E +++P C + GI  + Y PL  G   GK
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDG-SIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGK 216          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28
Identity = 82/212 (38.68%), Postives = 123/212 (58.02%), Query Frame = 2
Query:   47 GLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDH--DNEIMVGKALKQLPRD--KIQLATKFGCFMLDGVSIGVKGSPEYVRKCCEASLKRL-DVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIE-DDIIPLCRELGIGIVAYSPLGRGFFAGK 664
            G +V  +GFG  GL+    K    E    ++    ++G   +D  + YGVD    N  ++ +  ++ P +  K+ L+ K G   LD  ++   G+P++V K  E  +  L     +DL+   RVD +V IE TM  LK  V+ GKI  +GLSE SA+TI+RAHAV PI AV++EYSL++R+IE + I+ +CR+L I I+AYSP  RG   G+
Sbjct:    6 GFKVGPIGFGLMGLTW-KPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGG---LDFKTLVPDGNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGR 213          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28
Identity = 69/214 (32.24%), Postives = 114/214 (53.27%), Query Frame = 2
Query:   26 RVKLGSQGLEVSRLGFGCGGLSGIYNKP-LSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDKIQLATKFGCFMLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGK 664
            + KLG   L+V  +G G   + G    P L+ E G  +++E    G+T+ DT+ +YG+    E+ +G+ L++  R+ + +ATK       G       SP++++K  + SLKRL+ DYIDL+Y H  D     ++ +  L ++ + GKI+ IG+S  S + ++ A+    +  +Q EY+L  RE E    P  +E  I  + Y PL  G  AGK
Sbjct:    3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEEL-IGEVLREFNREDVVIATK-AAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 214          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27
Identity = 78/234 (33.33%), Postives = 124/234 (52.99%), Query Frame = 2
Query:   26 RVKLGSQGLEVSRLGFGCGGLSG--IYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDKIQLATKFGCFMLDGVSIGVKG---------SPEYVRKCCEASLKRLDVDYIDLYYQHRVDTS---VSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLP 685
            ++ LG+  + +SR+G G   + G   +N  L  ++    I E    GI L DT+  Y   + +E++VG+ALK+LPR+++ + TK G       S+  K          SPE +R+   ASL+RL +DYID+Y  H          I +T+  L +L  EGKI+ IG +   AD IR       +  +Q +YS+  R +E++++PLCR+ GI +  YSPL +G   G    + +P
Sbjct:    3 KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGN-SEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVP 235          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26
Identity = 75/215 (34.88%), Postives = 109/215 (50.70%), Query Frame = 2
Query:   35 LGSQGLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQL-PRDKIQLATKFGCFMLDGVSIGVKGSPEYVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVE 676
            +   G+E SR+G G   + G        +     I+   ++GITL DT+  YG     EI VGKA+K+   RD++ LATK      +            V +  E SLKRL  DYIDLY  H  D  V IE+T   +K+L + GKI+ IG+S  S + +    AV P+  +Q  Y+L+ RE+E+ ++P  ++  I  + Y  L RG   GK   E
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEI-VGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEV-ENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEE 218          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22
Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 2
Query:   47 GLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHD--NEIMVGKALKQLPR--DKIQLATKFGCFMLDGVSIGVKGSPEYVRKCCEASLKRL-DVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIE-DDIIPLCRELGIGIVAYSPLGRGFFAGK 664
            G +V  +G G  GL+    K    +    ++    ++G   ++  + YG++    N  ++    ++ P+  DK+ L+ K G    D  ++   G PE V K  + +L RL     +DL+   RVD  V IE TM  LK  V+ G+I  +GLSEASA++I+RA A+ PI AV+ EYSL++R+IE + I+  C +L I I+AY+P   G   G+
Sbjct:    6 GFKVGPIGLGLMGLTW-RPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGT---DFKTLAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGR 213          
BLAST of FC921134 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 76/221 (34.39%), Postives = 114/221 (51.58%), Query Frame = 2
Query:   32 KLGSQGLEVSRLGFGCGGLSGIYNKPLSHEVGCSIIKETFNRGITLFDTSDVYGVDHDNEIMVGKALKQLPRDKIQLATKFGCFMLDGVSIGVKGSPE--YVRKCCEASLKRLDVDYIDLYYQHRVDTSVSIEDTMGELKKLVEEGKIKYIGLSEASADTIRRAHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPS 688
            KLG+  L++S +G GC  L    NK LS      I+ E    GI   DT+D+Y    + EI VG A++    D I LATK G    DG S G    P   Y+++  + SL RL  DYIDLY  H      +I++T+   ++L +EG I+Y G+S    + I+       I ++ M++SL+ R  E + +PL  E  I +VA  P+ +G    K + ++  S
Sbjct:    5 KLGTSDLDISEVGLGCMSLGTEKNKALS------ILDEAIELGINYLDTADLYDRGRNEEI-VGDAIQNRRHDII-LATKAGNRWDDG-SEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPE-EWLPLLEEHQISVVARGPVAKGLLTEKPLDQASES 215          
The following BLAST results are available for this feature:
BLAST of FC921134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
A115_TOBAC6.507e-7563.25Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE7.194e-7463.44IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO1.239e-4146.58Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU5.398e-2935.55Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
PLR1_SCHPO1.570e-2838.68Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
IOLS_BACSU2.051e-2832.24Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YDJG_ECOLI1.018e-2733.33Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
GS69_BACSU3.275e-2634.88General stress protein 69 OS=Bacillus subtilis GN=... [more]
PLR2_SCHPO4.893e-2234.43Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
YQKF_BACSU8.347e-2234.39Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionC32101E06EF RVDevelopN Citrus clementina cDNA clone C32101E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921134 ID=FC921134; Name=FC921134; organism=Citrus clementina; type=EST; length=709bp
GGAGAAGCCTCAAGTCCATGTTCCGAGAGTGAAATTGGGCAGTCAGGGTT
TAGAGGTTTCCAGATTGGGTTTTGGCTGTGGGGGACTCTCTGGGATATAC
AACAAACCTCTTTCCCATGAGGTCGGATGTTCAATCATCAAGGAAACTTT
TAATAGGGGTATCACCCTTTTTGATACATCAGATGTTTATGGGGTTGATC
ATGACAATGAGATCATGGTTGGCAAGGCTTTAAAGCAGCTTCCTCGTGAT
AAGATTCAGTTAGCAACAAAATTTGGTTGTTTTATGCTAGATGGGGTTTC
TATTGGGGTAAAAGGCTCACCTGAATATGTACGGAAATGTTGTGAAGCCA
GTCTAAAGCGACTTGATGTAGACTATATTGATCTCTACTATCAGCATCGT
GTGGACACCTCAGTATCAATAGAGGATACGATGGGGGAACTCAAGAAGCT
AGTAGAGGAGGGAAAGATAAAATATATTGGGTTGTCTGAAGCCAGTGCAG
ACACAATAAGAAGAGCCCATGCTGTCCATCCCATAACAGCTGTACAAATG
GAATACTCGCTGTGGACTCGTGAAATCGAAGATGATATAATTCCTCTCTG
CAGAGAGCTCGGTATTGGCATAGTGGCATATAGCCCTCTTGGTCGAGGTT
TCTTTGCTGGGAAGGCAGTTGTGGAAAGCTTGCCCAGTGAGAGTATTTTG
GCAATGCAT
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