FC921136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP7_ARATH (Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.436e-72 Identity = 143/230 (62.17%), Postives = 164/230 (71.30%), Query Frame = 2 Query: 47 MSLRNSCLSRRISRSF----GEAHKSSKETELNAADDSVVSSTTSAPMDXXXXXXXXXXXXXXLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGAKPSAAGVVDDFAA 724 M L S LSRRIS SF GE + + + + SS+ SA +LPELLGEIIRRVE TED WP R++VV CACV K+WREIT D +S SGKITFPSCLK PGPR+F +QCLI+RNKKTSTFYLYLALTPSF++KGKFLLAARR+R GA++EYIISLDA D SQGSNAYVGKL SDFLG NFT+YDS+PPHNGAKPS FA+ Sbjct: 1 MPLSRSLLSRRISNSFRFHQGETTTAPESESIPPPSNMAGSSSWSA-----------------MLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFAS 213
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP1_ORYSJ (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.034e-59 Identity = 107/160 (66.88%), Postives = 132/160 (82.50%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGAKPSAA 700 LLPEL+ E++RRVE + + WP R++VV+CACVC+RWR+ +V+ P SGKITFPS LKQPGPREFP QC I+RNKK STFYLYL LT + +KGKFL+AARR+RRG H+EYI+SLDA DLSQGSNAY+GKL SDF G NF IYDS+PP++GAK S++ Sbjct: 37 LLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFPSSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFLMAARRFRRGPHTEYIVSLDADDLSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSS 196
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.298e-57 Identity = 106/167 (63.47%), Postives = 129/167 (77.25%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGAKPSAAGVVDDFAA 724 LLPELL EI+RRV+ + WP R++VVACACVC+RWR+ +V+ P G+ITFPS LKQPGPR+ P C IRRNKK STFYLYL+LT + ++KGKFLLAARR+R GAH+EYIIS D DL GSN+YVGKL SDFLG F IYDS+PP++GAKPS + FA+ Sbjct: 55 LLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFAS 221
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.137e-53 Identity = 99/159 (62.26%), Postives = 126/159 (79.25%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGAKPSA 697 LLPEL+ E++RRVE + + WP R+++V+CACVC+RWRE +V+ SG+ITFPS LKQPGP++FP QC ++RNKK S FYLYL L +KGKFL+AARR+RRG H+EY+ISLDA DLSQGSNAYVGKL SDF G NF IYD++PP++ AK S+ Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYDDAKTSS 185
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.542e-47 Identity = 87/154 (56.49%), Postives = 118/154 (76.62%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGA 685 L PELL E++ R+E +E WP R++VVACA VC+ WR ITK+IV+ P SGK+TFP LKQPGPR+ +C IRRN+ T T+YLY+ LT + ++ GKFLLAAR+ R+ ++Y+ISLD D+S+GSN Y+GKL S+FLG FT+YD+ PP++GA Sbjct: 55 LPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGA 208
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.296e-46 Identity = 87/153 (56.86%), Postives = 118/153 (77.12%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHN 679 L PELL ++++R+E E +WP R++VVACA VC+ WREI KDIV+SP + GK+TFP LKQPGPR+ QC I+R+K T+YLYL L+P+ SE GKFLLAA+R RR +EYIIS+D+ ++S+ SN YVGK+ S+FLG F +YD++PP+N Sbjct: 62 LPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYN 214
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.724e-46 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGAK 688 L+P+LL +I+R VE + WP R++VVACA VC+RWR++ +V+ P SGKITFPS LKQPGPR+ P QC I+RNKK STF+LYL LT ++ KFLLAARR RRG H EY I++++ L GS + VG L S+F G FTI D +PP+ GAK Sbjct: 54 LVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPPYEGAK 208
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.538e-45 Identity = 85/153 (55.56%), Postives = 115/153 (75.16%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNG 682 L PELL E++ RVE +E WP R++VVACA VC+ WR I ++IV++P SG +TFP LKQPGPR+ P +C I RN+ T T+YLY+ LT + ++ GKFLLAAR+ RR +EY+ISLD D+S+ +++YVGKL S+FLG FTIYD+ PP+ G Sbjct: 58 LPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAG 210
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.645e-45 Identity = 85/154 (55.19%), Postives = 115/154 (74.68%), Query Frame = 2 Query: 230 PELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFS-EKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGAK 688 PELL +++ R+E +ED+WP R+NVV+CA VC+ WREI K+IV+ P LS K+TFP LKQPGPR QC I RN+ T+YLYL L + S + GKFLLAA+R+RR ++YIISL+ D+S+GSN Y+GKL S+FLG FT+YD++P + G + Sbjct: 57 PELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQ 210
BLAST of FC921136 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.149e-44 Identity = 84/155 (54.19%), Postives = 118/155 (76.13%), Query Frame = 2 Query: 224 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGA 685 L PELL ++IRR+E +E +WP R++VV+CA VCK WRE+ K+IV SP GK+TFP LKQPGPR+ QC I+R+K ST++LYL L T ++ GKFLL+A+R+R+ +EY+IS+DA ++S+ S+ Y+GKL S+FLG F IYD++P +NGA Sbjct: 62 LPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGA 216 The following BLAST results are available for this feature:
BLAST of FC921136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921136 ID=FC921136; Name=FC921136; organism=Citrus clementina; type=EST; length=735bpback to top |