FC921206

Overview
NameFC921206
Unique NameFC921206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length652
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10443 contig Ccv1_Contig10443:1..640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 4.260e-51
Identity = 98/203 (48.28%), Postives = 133/203 (65.52%), Query Frame = 3
Query:   57 DVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEK----WFSALRDIGSANGAEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAERFCA 644
            ++K+LG W SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+K    W + L   GS    E + AA+               +CSKGK FFGG+ +GF+D+  G YLGW    +K+   +L+D  +TP L  W ERF A
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAIL--FGSKT-EEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRA 205          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.052e-41
Identity = 90/200 (45.00%), Postives = 114/200 (57.00%), Query Frame = 3
Query:   45 MVKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAE---AKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAER 635
            M   +V +L FWPS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+K +   R + +  G E   AKK  I                    K +FGG   GF+DIA   Y  W    E         E + P    WA+R
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALG--------DKPYFGGESFGFVDIALIGYYSWFYAYETFGNFS--TEAECPKFVAWAKR 190          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.060e-41
Identity = 86/197 (43.65%), Postives = 126/197 (63.96%), Query Frame = 3
Query:   51 KSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSAL-RDIGSANGAEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAERF 638
            + DVK+LG   SPF+ R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K   A+ + + + +  E +K                     K K FFGG + G +DIA      W+ + +++  ++L    K P L +W++ F
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENEL-----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEF 194          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41
Identity = 88/200 (44.00%), Postives = 114/200 (57.00%), Query Frame = 3
Query:   45 MVKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAE---AKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAER 635
            M   +V +L FWPS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+K +   R + +  G E   AKK  I                    + +FGG   GF+DIA   +  W    E         E + P    WA+R
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALG--------DRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKR 190          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 89/199 (44.72%), Postives = 116/199 (58.29%), Query Frame = 3
Query:   45 MVKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANG---AEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAE 632
            M  ++V +L FWPS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K +S  R + S  G    EAKK  I                    K +FGG+ +GF+D+A   +  W    E      +  E + P L  WA+
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELG--------NKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAK 188          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.421e-38
Identity = 88/196 (44.90%), Postives = 119/196 (60.71%), Query Frame = 3
Query:   54 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAERFC 641
            ++VK+LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K  +  +   S  G E +KA                    K K  F G++ GF DI       +L + E+++ + L    K P    W + +C
Sbjct:    2 AEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFS-KGEEQEKAKEEAYEMLKILDNEF-----KDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYC 189          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.424e-38
Identity = 88/195 (45.13%), Postives = 119/195 (61.03%), Query Frame = 3
Query:   54 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAERF 638
            ++VK+LGFW SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K  +A+ +     G E +K                     K K FF G++ GF DIA      WL V E+     L+   K P   +W + +
Sbjct:    2 AEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNEL-----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEY 188          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.166e-38
Identity = 86/191 (45.03%), Postives = 117/191 (61.26%), Query Frame = 3
Query:   54 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQW 626
            ++VK+LGFW SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K  + ++      G E +K                     K K FF G++ GF DIA      WL V E+ + V L+   K P   +W
Sbjct:    2 AEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF-LRKGEEQEK-----DKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKW 184          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.136e-38
Identity = 86/195 (44.10%), Postives = 119/195 (61.03%), Query Frame = 3
Query:   54 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLXQWAERF 638
            ++VK+LGFW SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K  +A+ +     G E +K                     K K FF G++ GF DIA      WL V E+   V L+   K P   +W + +
Sbjct:    2 AEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNEL-----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEY 188          
BLAST of FC921206 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36
Identity = 82/173 (47.40%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   45 MVKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANG---AEAKKAAIXXXXXXXXXXXXXXXKCSKGKAFFGGNQIGFLDIAFGSYLGW 554
            M  ++V +L F  S F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R+ ARFWA Y+D K +S  R + S  G    EAKK  I                    K +FGG+ +GF+D+A   +  W
Sbjct:    1 MESNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELG--------NKTYFGGDNLGFVDVALVPFTSW 164          
The following BLAST results are available for this feature:
BLAST of FC921206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ4.260e-5148.28Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX4_TOBAC1.052e-4145.00Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN3.060e-4143.65Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXC_TOBAC6.817e-4144.00Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTXA_TOBAC1.679e-3944.72Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_SOLTU1.421e-3844.90Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_TOBAC2.424e-3845.13Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC3.166e-3845.03Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC4.136e-3844.10Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_NICPL3.871e-3647.40Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionC32102D08EF RVDevelopN Citrus clementina cDNA clone C32102D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921206 ID=FC921206; Name=FC921206; organism=Citrus clementina; type=EST; length=652bp
GATTTCATTTCAGTTGCAAGAGCAGAGCTTAGAGAGAAAAAAAAATGGTA
AAAAGCGACGTGAAGGTTTTGGGTTTTTGGCCAAGCCCATTTCTGATGAG
GGCAAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGTTTCTGGAGG
AGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACCCTGTTCAC
AAGAAAATCCCCGTTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCT
CATTATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTA
TTCTTCCTTCTGATCCTTATGACCGTGCCGTTGCTCGTTTCTGGGCCGCT
TACGTTGATGAGAAGTGGTTCTCTGCCTTGAGAGACATTGGTAGTGCAAA
TGGAGCGGAAGCTAAGAAAGCTGCGATTGAGCAATTGATTGAAGTCTTGG
TTTTGCTGGAGGATGTTTTTGTTAAGTGTAGCAAAGGGAAGGCTTTCTTT
GGTGGAAACCAAATTGGGTTTCTTGACATTGCATTTGGTAGCTACTTGGG
ATGGCTGAGAGTGACAGAGAAAATGAATGAGGTGAAGCTCCTTGATGAAG
TCAAAACTCCTGGACTGTTNCAATGGGCTGAGAGATTCTGTGCTGACGCT
GC
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