FC921223

Overview
NameFC921223
Unique NameFC921223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:120..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 326.25 bits (835), Expect = 2.933e-92
Identity = 167/199 (83.92%), Postives = 180/199 (90.45%), Query Frame = 1
Query:    1 ASLLKSSSPALDKSEWVKGQAIR-QSTVSVRSLPSGPSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            ASLLK+S P LD  E++KGQ +R  S   VR  PSG SSLT+RA SYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLL++APGLGQY+SGAILFEE LYQSTTDGKKMVDVL+EQ IVPGIKVDKG +PL GSNDESWCQGLDGLA R+AAYYQQGARFAKWRTVVSIPNGPSALAV++
Sbjct:    4 ASLLKTS-PVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 201          

HSP 2 Score: 34.2686 bits (77), Expect = 2.933e-92
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQE 635
            P  L  +EAAWGLARYAAI Q+
Sbjct:  194 PSALAVKEAAWGLARYAAITQD 215          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 6.535e-89
Identity = 165/202 (81.68%), Postives = 180/202 (89.11%), Query Frame = 1
Query:    1 ASLLKSSSPALDKSEWVKGQAI---RQSTVSVRSLPSGPSSLTIRAGS-YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            A++LK+S     KS+WVKGQ++   + S+VS       PS+LT+RA S YADELVKTAKT+ASPG GI+AMDESNATCGKRLASIGLENTEANRQAYRTLLV+APGLGQYISGAILFEE LYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPL GS DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV++
Sbjct:    6 ATMLKASPV---KSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKE 204          

HSP 2 Score: 35.039 bits (79), Expect = 6.535e-89
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQET 638
            P  L  +EAAWGLARYAAI+Q++
Sbjct:  197 PSALAVKEAAWGLARYAAISQDS 219          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 6.536e-89
Identity = 165/200 (82.50%), Postives = 182/200 (91.00%), Query Frame = 1
Query:    4 SLLKSSSPALDKSEWVKGQAI--RQSTVSVRSLPSGPSSLTIRAGS-YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            SLLK+S P LDKSEWVKGQ++  RQ + +   L +  +SLT+RA S YADELVKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLV+APGLGQY+SGAILFEE LYQSTT+GKKMVDVLVEQNIVPGIKVDKGLVPL GSN+ESW QGLDGL+SRTAAYYQQGARFAKWRTVVSIPNGPSALAV++
Sbjct:    5 SLLKAS-PVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKE 203          

HSP 2 Score: 35.039 bits (79), Expect = 6.536e-89
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQET 638
            P  L  +EAAWGLARYAAI+Q++
Sbjct:  196 PSALAVKEAAWGLARYAAISQDS 218          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.334e-83
Identity = 146/160 (91.25%), Postives = 156/160 (97.50%), Query Frame = 1
Query:  115 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            LTIRAGSYADELVKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTE NRQA+RTLLVT P LG+YISGAILFEE LYQSTTDG+K+VDVL+EQNI+PGIKVDKGLVPLAGSNDESWCQGLDGLASR+AAYYQQGARFAKWRTVVSIPNGPSALAV++
Sbjct:    2 LTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 161          

HSP 2 Score: 34.6538 bits (78), Expect = 1.334e-83
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQE 635
            P  L  +EAAWGLARYAAI+Q+
Sbjct:  154 PSALAVKEAAWGLARYAAISQD 175          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 3.859e-83
Identity = 158/199 (79.40%), Postives = 169/199 (84.92%), Query Frame = 1
Query:    1 ASLLKSSSPALDKSEW-VKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            A+LLKSS     KSEW    QA     V+V        S+ +RAG+Y DELVKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEE LYQST DGKK+VD+L EQ IVPGIKVDKGLVPLAGSN+ESWCQGLDGLASR AAYYQQGARFAKWRTVVSIPNGPS LAV++
Sbjct:    4 ATLLKSSFLP-KKSEWGATRQAAAPKPVTV--------SMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKE 193          

HSP 2 Score: 33.113 bits (74), Expect = 3.859e-83
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQE 635
            P  L  +EAAWGLARYAAI+Q+
Sbjct:  186 PSELAVKEAAWGLARYAAISQD 207          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 8.577e-80
Identity = 140/155 (90.32%), Postives = 150/155 (96.77%), Query Frame = 1
Query:  130 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            GSYADELVKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLVT P LG+YISGAILFEE LYQST DG+K+VDVLVEQNI+PGIKVDKGLVPLAGSN+ESWCQGLDGLASR+AAYYQQGARFAKWRTVVSIPNGPSALAV++
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 155          

HSP 2 Score: 34.6538 bits (78), Expect = 8.577e-80
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQE 635
            P  L  +EAAWGLARYAAI+Q+
Sbjct:  148 PSALAVKEAAWGLARYAAISQD 169          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 4.604e-75
Identity = 135/185 (72.97%), Postives = 155/185 (83.78%), Query Frame = 1
Query:   40 SEWVKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRK 594
            S W+  ++   ++ S  S P    S  IRAG+Y+DELVKTAK++ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISG+ILFEE LYQST DGK  VD L + NIVPGIKVDKGL PLAGSN+ESWCQGLDGLASR+A YY+QGARFAKWRTVVS+P GPSALAV++
Sbjct:   14 SPWIGQRSFAHTSAS--SSPPPRVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKE 196          

HSP 2 Score: 34.6538 bits (78), Expect = 4.604e-75
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQE 635
            P  L  +EAAWGLARYAAI+Q+
Sbjct:  189 PSALAVKEAAWGLARYAAISQD 210          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.081e-58
Identity = 117/159 (73.58%), Postives = 128/159 (80.50%), Query Frame = 1
Query:  130 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVRKPPGV 606
            G Y +EL+KTA TVAS GRGILAMDESNATCGKRL SIG+ENTE NR+AYR LLVTAPGLGQYISGAILFEE LYQST  GKK VDV+ EQNIVPGIKVDKGLVP   +   SWC GLDG  S  A YY+ GARFAKWR+VVSIP+GPS +  R   G+
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPSIMLPRLAYGL 184          

HSP 2 Score: 25.0238 bits (53), Expect = 1.081e-58
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 3
Query:  597 AWGLARYAAIAQ 632
            A+GLARYAAIAQ
Sbjct:  181 AYGLARYAAIAQ 192          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.912e-48
Identity = 93/156 (59.62%), Postives = 118/156 (75.64%), Query Frame = 1
Query:  130 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRK 594
            G YADEL+K AK +A+PG+GILA DES  T GKRLASI +EN EANRQA R LL T+P   QY+SG ILFEE LYQ +++GK  V++L E N++PGIKVDKG+V LAG++ E+  QG D L +R   YY+ GARFAKWR V+ I PN PS L++++
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQ 161          

HSP 2 Score: 25.0238 bits (53), Expect = 1.912e-48
Identity = 13/22 (59.09%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  570 PICLGSQEAAWGLARYAAIAQE 635
            P  L  Q+ A GLARYA I QE
Sbjct:  154 PSELSIQQNAQGLARYAIICQE 175          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 8.313e-47
Identity = 95/159 (59.75%), Postives = 115/159 (72.33%), Query Frame = 1
Query:  136 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            Y DEL+KTAK +A+PGRGILA DES  T GKR A I +ENTE+NRQAYR LL T+PG    +SG ILFEE LYQ T+DGK  VD+L+E  ++PGIKVDKGLV LAG+N E+  QGLD L +R   YY+ GARFAKWR    I    PS L++++   VL
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVL 166          
The following BLAST results are available for this feature:
BLAST of FC921223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_SPIOL2.933e-9283.92Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC1_ARATH6.535e-8981.68Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH6.536e-8982.50Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA1.334e-8391.25Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ3.859e-8379.40Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA8.577e-8090.32Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH4.604e-7572.97Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_CHLRE1.081e-5873.58Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_PEA1.912e-4859.62Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH8.313e-4759.75Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC32102F01EF RVDevelopN Citrus clementina cDNA clone C32102F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921223 ID=FC921223; Name=FC921223; organism=Citrus clementina; type=EST; length=648bp
GCATCTTTACTCAAGTCATCATCCCCCGCTCTTGACAAGTCTGAGTGGGT
TAAGGGCCAGGCCATCCGCCAGTCTACTGTCTCAGTCCGCAGCCTCCCCA
GTGGCCCCTCTTCCCTCACCATCCGTGCTGGTTCCTATGCCGATGAGCTT
GTCAAGACCGCGAAAACTGTTGCATCACCAGGACGTGGAATTTTGGCCAT
GGATGAGTCAAATGCAACTTGTGGAAAACGCCTTGCCTCAATTGGGTTAG
AGAACACTGAGGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGCC
CCTGGTCTTGGACAGTACATCTCTGGTGCCATCCTTTTTGAGGAGGCTCT
CTACCAATCCACCACCGATGGCAAGAAGATGGTCGATGTTCTTGTTGAGC
AAAACATTGTCCCCGGTATCAAAGTCGACAAGGGTTTGGTGCCCCTTGCT
GGTTCCAATGATGAGTCATGGTGCCAGGGTCTTGATGGCCTGGCTTCTCG
CACTGCTGCTTACTACCAACAGGGAGCTCGTTTCGCCAAATGGCGTACTG
TTGTGAGCATTCCCAATGGCCCATCTGCCTTGGCAGTCAGGAAGCCGCCT
GGGGTCTTGCCCGCTATGCTGCCATTGCTCAAGAAACGGATTGGTCCC
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