FC921224

Overview
NameFC921224
Unique NameFC921224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 330.102 bits (845), Expect = 6.870e-90
Identity = 147/225 (65.33%), Postives = 184/225 (81.78%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYNPLSEACDSKLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVR 676
            YEHGPFNFE+  +  SLPKLH+NPY+W+KVS++IYLDSPAGVGLSYS+N +DY TGDLKTA+D+HTFLLKWF+LYPEFL+NPF+IAGESYAG+YVPTL++EV+KGI  G KP +NFKGY+VGNGV D   DGNALVPF HGMGLISD++Y++    C GN++N     CD+ +S++E  I+GLN+YDILEPCYH     E+   N +LP SF+ LG T++P PVR
Sbjct:  100 YEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEVVKGIQGGAKPTINFKGYMVGNGVCDTIFDGNALVPFAHGMGLISDEIYQQASTSCHGNYWNATDGKCDTAISKIESLISGLNIYDILEPCYHSRSIKEVNLQNSKLPQSFKDLGTTNKPFPVR 324          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.611e-89
Identity = 148/225 (65.78%), Postives = 183/225 (81.33%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYNPLSEACDSKLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVR 676
            YEHGPFNFE+  +  SLPKLH+NPYSW+KVSS+IYLDSPAGVGLSYS+N +DY TGDLKTA+D+HTFLLKWF+LYPEFL+NPF+IAGESYAG+YVPTL++EV+KG+  G KP +NFKGY+VGNGV D   DGNALVPF HGM LISDD+Y+E Q  C GN++N  ++ C++ L +V+  I  LN+YDILEPCYH     ++  AN +LP SF+ LG T +PL VR
Sbjct:  106 YEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYNTGDLKTAADSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHEVVKGLHDGVKPTINFKGYMVGNGVCDTVFDGNALVPFAHGMALISDDIYQEAQTACHGNYWNTTTDKCENALYKVDTSINDLNIYDILEPCYHSKTIKKVTPANTKLPKSFQHLGTTTKPLAVR 330          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.812e-82
Identity = 144/226 (63.72%), Postives = 175/226 (77.43%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYNPLSEACDSKLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIR-LPSSFRQLGETDRPLPVR 676
            YEHGPFNFE P    SLP LH+NPYSW+KVS+IIYLDSP GVG SYS NK+DY+TGD+KTA D+H FLLKWF+++PEF +NPFFI+GESYAG+YVPTLA EV+ G   G KP LNFKGYLVGNGV D + DGNA VPF HGMGLISD+L+E V   C+GNFY      C+ + ++V  D   LN+Y+ILEPCYHG     ++A +IR LPSS  QLG+T++ LP+R
Sbjct:   98 YEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYITGDIKTAVDSHAFLLKWFQMFPEFQSNPFFISGESYAGVYVPTLASEVVIGNKNGVKPALNFKGYLVGNGVADPKFDGNAFVPFAHGMGLISDELFENVTKACKGNFYEIEGLECEEQYTKVNDDTNQLNIYNILEPCYHGT---SLSAFDIRSLPSSLLQLGKTEKRLPIR 320          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.486e-76
Identity = 142/230 (61.74%), Postives = 171/230 (74.35%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFY----NPLSEACDSKLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIR-LPSSFRQLGETDRPLPVR 676
            YEHGPFNFE       L  LH+NPYSW+KVS+IIYLDSP GVG SYS +  DY T D KTASDTHTFLL+WF+++PEF +NPFFI+GESYAGIYVPTLA EV+KG     KPV+NFKGYLVGNGVTDE  DGNALVPF HGMGLISD+LYEE + +C G +Y    + +S+ C  KL  V   +  LN+Y+ILEPCYHG     ++A +I  LP S   LG+T++P+ VR
Sbjct:   93 YEHGPFNFEPKKKNSHL--LHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTFLLEWFKMFPEFQSNPFFISGESYAGIYVPTLAAEVVKGHKNVTKPVINFKGYLVGNGVTDEVFDGNALVPFTHGMGLISDELYEETKLVCNGTYYTGGQSGVSKECAGKLKTVSDTVNLLNLYNILEPCYHGT---SLSALDIEFLPKSLLTLGKTEKPMAVR 317          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.363e-44
Identity = 83/193 (43.01%), Postives = 120/193 (62.18%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNF--YNPLSEACDSKLSEVEKDIAGLNMYDILEP 574
            YE+GP  F+A    GS+P L    Y+WTKV+SI+YLD P G G SYS N    +  D   A   + FL KW + +PEFL+NP ++AG SY+GI +PT+  E+  G     KP +N +G+++GN  TD +ID N+ +PF HG  LISD+ YE ++  CQGN+   NP +  C   L + +K ++G++   IL+P
Sbjct:   93 YENGPIAFKAEEYNGSIPSLVSTTYAWTKVASILYLDQPVGTGFSYSRNPLADIPSDTGVAKPVNEFLHKWLDKHPEFLSNPLYVAGNSYSGIVIPTIVQEISNGNHLDSKPQINLQGFVLGNPATDTDIDLNSRIPFAHGKALISDEHYESLKRSCQGNYISVNPRNTKCLKLLEDFKKCVSGISEEYILKP 285          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.241e-40
Identity = 82/193 (42.49%), Postives = 112/193 (58.03%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYDILEP 574
            YE+GP N +     G+LP L    YSWTKVSSIIYLD P G G SYS  K      D   A   H FL KW   + EF +NPF++ G+SY G+ +P L  E+ KG     KP +N +GY++GN  T+ E+D N  +P+ HGM LISD+LYE ++ +C+G + N  P +  C   + E +K    +N   I+ P
Sbjct:   92 YENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCGMVIPALVQEISKGNYVCCKPPINLQGYILGNPSTENEVDINYRIPYAHGMALISDELYESMKRICKGKYENVDPRNTKCLKLVGEYQKCTKRINKALIITP 284          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 78/186 (41.94%), Postives = 111/186 (59.68%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNF--YNPLSEACDSKLSEVEKDIAGLN 553
            +E GP  F+     G LP L    YSWTKV+SII+LD P G G SYS     Y   D   A  T+ FL KW    P+F++NP ++ G+SYAGI VP +  ++  G + G KP +N KGY++GN  TD + D N+ +P+ H MGLISD+LYE ++  CQGN+   +P +  C   + +  K ++ +N
Sbjct:   92 FEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPLSYKPSDTGEAKQTYEFLQKWLVENPQFVSNPIYVGGDSYAGIVVPAIVQQISIGNEHGYKPQINLKGYILGNPSTDLDSDHNSKIPYAHRMGLISDELYESLKRTCQGNYVKVDPTNTKCLKLMEDYGKCVSRIN 277          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 77/193 (39.90%), Postives = 117/193 (60.62%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYDILEP 574
            +E+GP   +     GS P L    YSWTK+++II+LD P G G SYS+   D  TGD+     TH FL KW   +P++ +NP ++ G+SY+G+ VP L  E+ +G     +P +N +GY++GN VT  + + N  +P+ +GMGLISD++YE ++ +C GN+YN  P +  C     E  K  A +N++ IL P
Sbjct:   86 FENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTP 277          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 79/193 (40.93%), Postives = 114/193 (59.07%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYDILEP 574
            +E+GP   ++    GS+P L    YSWTK ++II+LD P G G SYS         D     + H FL KW   +P+F +NPF+ +G+SY+G+ VP L  E+ KG     KP +N +GY++GN +T  E+D N  +PF HGM LISD+LYE ++  C+GN++N  P +  C   + E  K    LN ++IL P
Sbjct:   88 FENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTPSDTGEVKNIHEFLQKWLSKHPQFSSNPFYASGDSYSGMIVPALVQEISKGNYICCKPPINLQGYILGNPITYFEVDQNYRIPFSHGMALISDELYESIRRDCKGNYFNVDPRNTKCLKLVEEYHKCTDELNEFNILSP 280          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 80/193 (41.45%), Postives = 112/193 (58.03%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNF--YNPLSEACDSKLSEVEKDIAGLNMYDILEP 574
            YE+GP   +     G+LP L    YSWTK SS+I+LD P G G SYS  +      D   A   H FL KW   + EF +NPF++ G+SY+GI VP    E+ KG     KP +N +GY++GN +TD +IDGN+ +P+ HGM LISD+LYE ++ +C+G +   +P +  C   L E  +  + L    IL P
Sbjct:   96 YENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGITVPATVQEISKGNYQCCKPPINLQGYMLGNPITDSKIDGNSQIPYAHGMALISDELYESLKRICKGEYEHVDPYNTECLKLLEEFNECTSKLYRSHILYP 288          
The following BLAST results are available for this feature:
BLAST of FC921224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CBP1_HORVU6.870e-9065.33Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
CBP1_ORYSJ2.611e-8965.78Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP20_ARATH1.812e-8263.72Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
SCP21_ARATH1.486e-7661.74Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP17_ARATH4.363e-4443.01Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP7_ARATH2.241e-4042.49Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP18_ARATH3.822e-4041.94Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP8_ARATH4.992e-4039.90Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP12_ARATH1.453e-3940.93Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP6_ARATH2.478e-3941.45Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102F02EF RVDevelopN Citrus clementina cDNA clone C32102F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921224 ID=FC921224; Name=FC921224; organism=Citrus clementina; type=EST; length=696bp
ATATGAGCACGGGCCTTTCAATTTTGAAGCACCAACGACAAAGGGAAGTC
TGCCCAAGTTGCATGTCAATCCATATAGCTGGACCAAGGTTTCTAGCATT
ATATATTTAGATTCCCCAGCTGGTGTTGGACTTTCTTACTCAGAAAATAA
AACTGATTATGTTACTGGGGACTTAAAGACTGCCTCTGATACACACACAT
TTCTCCTCAAGTGGTTTGAATTATACCCGGAGTTCCTAACCAACCCATTT
TTTATTGCTGGAGAGTCATATGCTGGGATATATGTGCCCACTCTTGCTTA
TGAAGTGATGAAAGGAATTGATGCTGGTGAAAAACCTGTTCTGAACTTCA
AGGGATATCTGGTGGGAAATGGAGTAACAGATGAAGAGATTGATGGGAAC
GCGCTTGTTCCATTTGTGCATGGGATGGGTCTGATATCAGATGACCTATA
TGAGGAGGTGCAAAATTTGTGCCAAGGAAATTTCTATAACCCACTCAGTG
AGGCTTGTGACAGCAAGCTTTCTGAAGTTGAGAAGGATATTGCAGGTTTA
AACATGTATGATATTTTAGAGCCGTGCTATCATGGCAATGAGACATGGGA
GATTGCAGCCGCTAACATTAGGTTACCATCCAGCTTCCGGCAGTTGGGTG
AGACTGATAGGCCTCTTCCTGTGAGGATAGGATGTTTGGTCGTGCC
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