FC921233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX7_MOUSE (Sorting nexin-7 OS=Mus musculus GN=Snx7 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22 Identity = 70/227 (30.84%), Postives = 110/227 (48.46%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYF-----------------KKKPADLMQIFKDVQS---------KVSDVVLGKEKPVEESNPEYEKLKHYIF-----ELETTWLKLRTCISSCQRHRE 709 L ++V P ++ +I+YR++TKT+ E+ E V RRY DF+WL+ +L E + + IPPLPEK V+ RF+ +FIE RR+ L F+NRIA HP L +ED K FL A E + + Q G K +P + M++ +++ K+S + +E+ + EY + H ++ EL T + CI C + E Sbjct: 32 LFITVDAPESHVTTIETFITYRIVTKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKVFLTAQAEELSSYKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIETFSQKINLIDKISQRIYKEERDYFDEMKEYGPI-HILWSASEEELVDTLKGMAGCIEQCCKATE 257
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX30_XENTR (Sorting nexin-30 OS=Xenopus tropicalis GN=snx30 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.313e-21 Identity = 74/193 (38.34%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQR 700 L V+V DP K ++ YI+YRV TKT E+ PE + RRY DF WLR++L E FIPPLPEK V+ RFS EF+E RR+ LD F+ RIA HP L +E FL A +D KK+ L+ + V+ + +PV E+ + Y L+T LKL T QR Sbjct: 100 LFVTVDDPKKHVCTMETYITYRVSTKTTRTEFDLPEYSIRRRYQDFDWLRNKLEETQPTHFIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRIADHPVLSFNEHFNVFLTA----------KDLNSHKKQGITLLSKMGESVRYVTSGYKLRNRPV-----EFATITDY---LDTFQLKLGTIDRIAQR 274
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX7_MACFA (Sorting nexin-7 OS=Macaca fascicularis GN=SNX7 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESN 613 L ++V +P ++ +I+YR+ITKT+ E+ E V RRY DF+WL+ +L E + + IPPLPEK V+ RF+ +FIE RR+ L F+NRIA HP L +ED K FL A + + Q G + + Q + V S + V E+ +E +N Sbjct: 32 LFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSR----MGQTVRAVASSMRGVKNRPEEFMEMNN 191
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX7_HUMAN (Sorting nexin-7 OS=Homo sapiens GN=SNX7 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKF--RFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESN 613 L ++V +P ++ +I+YR+ITKT+ E+ E V RRY DF+WL+ +L E + + IPPLPEK V+ RF+ +FIE RR+ L F+NRIA HP L +ED K FL A + + Q G + + Q + V S + V E+ +E +N Sbjct: 32 LFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSR----MGQTVRAVASSMRGVKNRPEEFMEMNN 191
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX1_RAT (Sorting nexin-1 OS=Rattus norvegicus GN=Snx1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 64/204 (31.37%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQRHRE 709 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E + G A L+++F +K +D V + ES+ +E+ + E KL + + HR+ Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE------LPRAVGTQALSGAGLLKMF----NKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRK 338
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX1_MOUSE (Sorting nexin-1 OS=Mus musculus GN=Snx1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 64/204 (31.37%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQRHRE 709 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E + G A L+++F +K +D V + ES+ +E+ + E KL + + HR+ Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE------LPRAVGTQALSGAGLLKMF----NKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRK 338
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX1_MACFA (Sorting nexin-1 OS=Macaca fascicularis GN=SNX1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 64/204 (31.37%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQRHRE 709 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E + G A L+++F +K +D V + ES+ +E+ + E KL + + HR+ Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE------LPRAVGTQTLSGAGLLKMF----NKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRK 338
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX1_HUMAN (Sorting nexin-1 OS=Homo sapiens GN=SNX1 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.326e-21 Identity = 64/204 (31.37%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQRHRE 709 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E + G A L+++F +K +D V + ES+ +E+ + E KL + + HR+ Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE------LPRAVGTQTLSGAGLLKMF----NKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRK 338
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX1_BOVIN (Sorting nexin-1 OS=Bos taurus GN=SNX1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21 Identity = 63/204 (30.88%), Postives = 108/204 (52.94%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQRHRE 709 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E + G A L+++F VS + + + ES+ +E+ + E KL + + HR+ Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKHFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE------LPRAVGTQTLSGAGLLKMFNKATDAVSKMTIN----MNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRK 338
BLAST of FC921233 vs. ExPASy Swiss-Prot
Match: SNX1_PONAB (Sorting nexin-1 OS=Pongo abelii GN=SNX1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.380e-21 Identity = 64/204 (31.37%), Postives = 109/204 (53.43%), Query Frame = 2 Query: 128 LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLRDRLFEKY--KGIFIPPLPEKSAV--------EKFRFSAEFIEMRRQGLDLFVNRIASHPELQQSEDLKTFLQADEETMERLRSQDTGYFKKKPADLMQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELETTWLKLRTCISSCQRHRE 709 L+V +TDP K+G+G+ AY++Y+V T+T+ P ++ + V RR+SDF+ L ++L EK+ G +PP PEKS + ++ SAEF+E RR L+ ++ RI +HP + Q D++ FL+ +E + G A L ++F +K +D V + ES+ +E+ + E KL + + HR+ Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYIQRIVNHPTMLQDPDVREFLEKEE------LPRAVGTQTLSGAGLPKMF----NKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRK 338 The following BLAST results are available for this feature:
BLAST of FC921233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921233 ID=FC921233; Name=FC921233; organism=Citrus clementina; type=EST; length=730bpback to top |