FC921317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 4.274e-87 Identity = 154/202 (76.24%), Postives = 172/202 (85.15%), Query Frame = 2 Query: 89 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQ 694 M + SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQA+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T AIA AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP GSDAS L TTATKVEGGW + GQ Sbjct: 1 MAVLSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQ 202
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: GCDH_CAEEL (Probable glutaryl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 227 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTAT 661 D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +GYGC G S G + E+ RVD+ + + V +SL + I GSE+QKQKY+P LA I C+ LTEP +GS+ + T AT Sbjct: 24 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMETKAT 168
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACDB_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=mmgC PE=2 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 251 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 691 +T E+ +R VR+ KEIAP E EK EFPF +I K+G + G + + YG G V +AI EI+R+ A+ + VH+S+ I G+EEQK KY+P+LA + + +ALTEP GSDA +L TTA K G ++L G Sbjct: 3 VTQEQVMMRKMVRDFARKEIAPA-AEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNG 150
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: GCDH_HUMAN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 2 Query: 242 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA 658 ++ LT++E +R R ++ + P ++ F +I ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA+ + C+ LTEP GSD S++ T A Sbjct: 57 EEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRA 195
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: GCDH_MACFA (Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 242 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA 658 ++ LT++E +R R ++ + P ++ F +I ++G L V G TIKGYGC G S + E+ RVD+ + + V S L M I GSEEQ+QKYLP LA+ + C+ LTEP GSD S++ T A Sbjct: 57 EEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISQMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMETRA 195
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: GCDH_BOVIN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 242 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA 658 ++ LT++E +R R ++ + P ++ F +I ++G L + G TI+GY C G S + E+ RVD+ + + V SSL M I GSEEQKQKYLP LA+ + C+ LTEP +GSD S + T A Sbjct: 57 EEQLTADEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGMLGPTIQGYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAKGELLGCFGLTEPNHGSDPSGMETRA 195
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: GCDH_MOUSE (Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 242 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA 658 ++ LT++E+ +R R ++ + ++ F ++ ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA+ + C+ LTEP +GSD + T A Sbjct: 57 EEQLTADEKLIRDTFRNYWQERLMSQILLANRNEVFHRDIVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMETRA 195
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18 Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 242 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE-QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA 658 ++ LT++E +R R ++ + P +V F +I ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I GSEE Q+QKYLP LA+ + C+ LTEP +GSD ++ T A Sbjct: 26 EEQLTADEILIRDTFRTYCQEHLMPRIVLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRA 165
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACDS_CLOAB (Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum GN=bcd PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 54/148 (36.49%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 251 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 691 LT E++ VR VRE E E+ PI E E FP + K+G + G K YG G V IA+ E+++V + + H+SL I G+EEQKQKYL LA+ I + LTEP G+D+ A T A +++ G Sbjct: 5 LTREQELVRQMVREFAENEVKPIAAEIDETERFPMENVKKMGQYGMMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYGLTEPNAGTDSGAQQTVAVLEGDHYVING 152
BLAST of FC921317 vs. ExPASy Swiss-Prot
Match: ACDP_MYCLE (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae GN=fadE25 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15 Identity = 56/148 (37.84%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 251 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEG 691 L E +R +R EKEIAP + ++A FP + L A + + YG G A I I E+ARVDAS S V+ L + + L GSEE K++ LPSLA +A +AL+E GSDA+++ T A WIL G Sbjct: 15 LPEEHNELRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVNK-LGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNG 161 The following BLAST results are available for this feature:
BLAST of FC921317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921317 ID=FC921317; Name=FC921317; organism=Citrus clementina; type=EST; length=704bpback to top |