FC921319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUBL_ARATH (Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2) HSP 1 Score: 272.707 bits (696), Expect = 1.041e-72 Identity = 133/183 (72.68%), Postives = 155/183 (84.70%), Query Frame = 2 Query: 71 DDWSNFEDEDIMQQQSDIKAEEAQKVPFVADKEPLSALASEYQSGSPILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFILG 619 ++W N ++ Q + EEA KVP+V DKEPLS+LA+EYQSGSPILLEKIK+L QY IRRTRGDGNCFFRSFMFSYLEHIL SQD+AEVDRIK VE+CR+TLQ+LG+ DFTFEDFFALFLEQLD++LQG E SIS+ ELV RSRDQSVSDY+VMFFRFVT+G+IR R++FFEPFI G Sbjct: 24 EEWGNCSS---VEDQPSFQEEEAAKVPYVGDKEPLSSLAAEYQSGSPILLEKIKILDSQYIGIRRTRGDGNCFFRSFMFSYLEHILESQDRAEVDRIKVNVEKCRKTLQNLGYTDFTFEDFFALFLEQLDDILQGTEESISYDELVNRSRDQSVSDYIVMFFRFVTAGDIRTRADFFEPFITG 203
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUB1_RAT (Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus GN=Otub1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.549e-31 Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 2 Query: 17 SERKKMQNQEKCGASCEFDDWSNFEDEDIMQQQSDIKAEEAQKVPFVADKEPLSALASEYQSGSPILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFILG 619 +E + Q QE G+ E + + DE IM QQ I+ E A + P V+++ LS L EY I +KIK L ++Y+ IR+TR DGNCF+R+F FS+LE +L D E+ R KA + + L S G +FT EDF F++ ++ V E S +L+ DQS SDY+V++ R +TSG +++ S+FFE FI G Sbjct: 3 AEEPQQQKQEPLGSDSEGVNCLAY-DEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALL--DDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQV----EKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUB1_MOUSE (Ubiquitin thioesterase OTUB1 OS=Mus musculus GN=Otub1 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.549e-31 Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 2 Query: 17 SERKKMQNQEKCGASCEFDDWSNFEDEDIMQQQSDIKAEEAQKVPFVADKEPLSALASEYQSGSPILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFILG 619 +E + Q QE G+ E + + DE IM QQ I+ E A + P V+++ LS L EY I +KIK L ++Y+ IR+TR DGNCF+R+F FS+LE +L D E+ R KA + + L S G +FT EDF F++ ++ V E S +L+ DQS SDY+V++ R +TSG +++ S+FFE FI G Sbjct: 3 AEEPQQQKQEPLGSDSEGVNCLAY-DEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALL--DDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQV----EKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUB1_HUMAN (Ubiquitin thioesterase OTUB1 OS=Homo sapiens GN=OTUB1 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.549e-31 Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 2 Query: 17 SERKKMQNQEKCGASCEFDDWSNFEDEDIMQQQSDIKAEEAQKVPFVADKEPLSALASEYQSGSPILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFILG 619 +E + Q QE G+ E + + DE IM QQ I+ E A + P V+++ LS L EY I +KIK L ++Y+ IR+TR DGNCF+R+F FS+LE +L D E+ R KA + + L S G +FT EDF F++ ++ V E S +L+ DQS SDY+V++ R +TSG +++ S+FFE FI G Sbjct: 3 AEEPQQQKQEPLGSDSEGVNCLAY-DEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALL--DDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQV----EKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUBL_DROME (Ubiquitin thioesterase otubain-like OS=Drosophila melanogaster GN=CG4968 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.205e-28 Identity = 71/178 (39.89%), Postives = 106/178 (59.55%), Query Frame = 2 Query: 92 DEDIMQQQSDIKAEEAQKVPFVADKEPLSALASEYQSGSPILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNES--SISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFILG 619 DE I+QQ+ DI+ E + P V+++ PL+ L +EY SG I KI+ L ++Y IRRTR DGNCFFR+F +SYLE++++ + + K EE + L LG FT EDF F+E + V N S EL +Q SDYVV++ R +TSG++++ ++F++ FI G Sbjct: 12 DELIIQQKRDIEKEISDTTPLVSEQLPLTCLYAEY-SGDEIFTAKIQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLIS--NTSAYQEFKKLAEESKEKLVQLGFPSFTLEDFHETFMEVIQRVSPDNAGGHSTVQDELHKIFNEQGYSDYVVVYLRLITSGKLQEEADFYQNFIEG 186
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUBL_CAEEL (Ubiquitin thioesterase otubain-like OS=Caenorhabditis elegans GN=C25D7.8 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.093e-21 Identity = 66/179 (36.87%), Postives = 97/179 (54.19%), Query Frame = 2 Query: 89 EDEDIMQQQSDIKAEEAQK-VPFVADKEPLSALASEYQSG-SPILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRS--RDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFI 613 +DE ++Q Q E+ QK VP VA P S L +EY + S L K L E Y IR RGDGNCF+R+ + +E +L +D+A +++ A + RTL LG D+T DF F+E L+ + G H E V + D ++Y++MFFR +TS +++ SE + PFI Sbjct: 21 DDEIVLQDQQLKTIEDEQKSVPLVATLAPFSILCAEYDNETSAAFLSKATELSEVYGEIRYIRGDGNCFYRAILVGLIEIML--KDRARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSG-----VHTEEAVYTILNDDGSANYILMFFRLITSAFLKQNSEEYAPFI 192
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUB2_HUMAN (Ubiquitin thioesterase OTUB2 OS=Homo sapiens GN=OTUB2 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 212 ILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFI 613 I KI+ L +++ AIR+T+GDGNCF+R+ +SYLE +L E+ + K +V + L + G + F +FF F ++ V E S L+ DQS SD++V F R +TS IR R++FF FI Sbjct: 27 IYRRKIEELSKRFTAIRKTKGDGNCFYRALGYSYLESLLGK--SREIFKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELV----EKDGSVSSLLKVFNDQSASDHIVQFLRLLTSAFIRNRADFFRHFI 154
BLAST of FC921319 vs. ExPASy Swiss-Prot
Match: OTUB2_MOUSE (Ubiquitin thioesterase OTUB2 OS=Mus musculus GN=Otub2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.252e-16 Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 212 ILLEKIKVLGEQYAAIRRTRGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRRTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRDQSVSDYVVMFFRFVTSGEIRKRSEFFEPFI 613 I KI+ L +++ +IR+T+GDGNCF+R+ +SYLE +L E+ + K +V + L + G + F +FF F ++ L +SS+S L+ DQS SD +V F R +TS IR R++FF FI Sbjct: 27 IYQRKIQELSKRFTSIRKTKGDGNCFYRALGYSYLESLLGK--SREILKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVE--LVEKDSSVS--SLLKVFNDQSSSDRIVQFLRLLTSAFIRNRADFFRHFI 154 The following BLAST results are available for this feature:
BLAST of FC921319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921319 ID=FC921319; Name=FC921319; organism=Citrus clementina; type=EST; length=621bpback to top |