FC921320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUBL_ARATH (Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 1.964e-68 Identity = 128/174 (73.56%), Postives = 146/174 (83.91%), Query Frame = 2 Query: 17 VQQQSDIKAEEAQKVPFVADNEPLSALASEYLSGSPILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFILGLT 538 V+ Q + EEA KVP+V D EPLS+LA+EY SGSPILLEKIK+L QY IRRT GDGNCFFRSFMFSYLEHIL SQD+AEVDRIK VE+CR TLQ+LG+ DFTFEDFFALFLEQLD++LQG E SIS+ ELV RSR QSVSDY+VMFFRFVT+G+ R+DFFEPFI GL+ Sbjct: 32 VEDQPSFQEEEAAKVPYVGDKEPLSSLAAEYQSGSPILLEKIKILDSQYIGIRRTRGDGNCFFRSFMFSYLEHILESQDRAEVDRIKVNVEKCRKTLQNLGYTDFTFEDFFALFLEQLDDILQGTEESISYDELVNRSRDQSVSDYIVMFFRFVTAGDIRTRADFFEPFITGLS 205
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUBL_DROME (Ubiquitin thioesterase otubain-like OS=Drosophila melanogaster GN=CG4968 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.393e-27 Identity = 71/178 (39.89%), Postives = 100/178 (56.18%), Query Frame = 2 Query: 5 DEDIVQQQSDIKAEEAQKVPFVADNEPLSALASEYLSGSPILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNES--SISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFILG 532 DE I+QQ+ DI+ E + P V++ PL+ L +EY SG I KI+ L ++Y IRRT DGNCFFR+F +SYLE++++ + + K EE + L LG FT EDF F+E + V N S EL Q SDYVV++ R +TSG+ +DF++ FI G Sbjct: 12 DELIIQQKRDIEKEISDTTPLVSEQLPLTCLYAEY-SGDEIFTAKIQDLSKKYKFIRRTRPDGNCFFRAFAYSYLEYLIS--NTSAYQEFKKLAEESKEKLVQLGFPSFTLEDFHETFMEVIQRVSPDNAGGHSTVQDELHKIFNEQGYSDYVVVYLRLITSGKLQEEADFYQNFIEG 186
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUB1_RAT (Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus GN=Otub1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26 Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 5 DEDIVQQQSDIKAEEAQKVPFVADNEPLSALASEYLSGSPILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFILG 532 DE I+ QQ I+ E A + P V++ LS L EY I +KIK L ++Y+ IR+T DGNCF+R+F FS+LE +L D E+ R KA + + L S G +FT EDF F++ ++ V E S +L+ QS SDY+V++ R +TSG S FFE FI G Sbjct: 27 DEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALL--DDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQV----EKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUB1_MOUSE (Ubiquitin thioesterase OTUB1 OS=Mus musculus GN=Otub1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26 Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 5 DEDIVQQQSDIKAEEAQKVPFVADNEPLSALASEYLSGSPILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFILG 532 DE I+ QQ I+ E A + P V++ LS L EY I +KIK L ++Y+ IR+T DGNCF+R+F FS+LE +L D E+ R KA + + L S G +FT EDF F++ ++ V E S +L+ QS SDY+V++ R +TSG S FFE FI G Sbjct: 27 DEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALL--DDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQV----EKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUB1_HUMAN (Ubiquitin thioesterase OTUB1 OS=Homo sapiens GN=OTUB1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26 Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 5 DEDIVQQQSDIKAEEAQKVPFVADNEPLSALASEYLSGSPILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFILG 532 DE I+ QQ I+ E A + P V++ LS L EY I +KIK L ++Y+ IR+T DGNCF+R+F FS+LE +L D E+ R KA + + L S G +FT EDF F++ ++ V E S +L+ QS SDY+V++ R +TSG S FFE FI G Sbjct: 27 DEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALL--DDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQV----EKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUBL_CAEEL (Ubiquitin thioesterase otubain-like OS=Caenorhabditis elegans GN=C25D7.8 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.061e-17 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 5 DEDIVQQQSDIKA--EEAQKVPFVADNEPLSALASEYLSG-SPILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRS--RHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFI 526 D++IV Q +K +E + VP VA P S L +EY + S L K L E Y IR GDGNCF+R+ + +E +L +D+A +++ A + TL LG D+T DF F+E L+ + G H E V + ++Y++MFFR +TS S+ + PFI Sbjct: 21 DDEIVLQDQQLKTIEDEQKSVPLVATLAPFSILCAEYDNETSAAFLSKATELSEVYGEIRYIRGDGNCFYRAILVGLIEIML--KDRARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHSG-----VHTEEAVYTILNDDGSANYILMFFRLITSAFLKQNSEEYAPFI 192
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUB2_HUMAN (Ubiquitin thioesterase OTUB2 OS=Homo sapiens GN=OTUB2 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.786e-14 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 125 ILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFI 526 I KI+ L +++ AIR+T GDGNCF+R+ +SYLE +L E+ + K +V + L + G + F +FF F ++ V E S L+ QS SD++V F R +TS R+DFF FI Sbjct: 27 IYRRKIEELSKRFTAIRKTKGDGNCFYRALGYSYLESLLGK--SREIFKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELV----EKDGSVSSLLKVFNDQSASDHIVQFLRLLTSAFIRNRADFFRHFI 154
BLAST of FC921320 vs. ExPASy Swiss-Prot
Match: OTUB2_MOUSE (Ubiquitin thioesterase OTUB2 OS=Mus musculus GN=Otub2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.806e-13 Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 125 ILLEKIKVLGEQYAAIRRTPGDGNCFFRSFMFSYLEHILASQDQAEVDRIKAKVEECRTTLQSLGHADFTFEDFFALFLEQLDNVLQGNESSISHGELVVRSRHQSVSDYVVMFFRFVTSGEKT*RSDFFEPFI 526 I KI+ L +++ +IR+T GDGNCF+R+ +SYLE +L E+ + K +V + L + G + F +FF F ++ L +SS+S L+ QS SD +V F R +TS R+DFF FI Sbjct: 27 IYQRKIQELSKRFTSIRKTKGDGNCFYRALGYSYLESLLGK--SREILKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVE--LVEKDSSVS--SLLKVFNDQSSSDRIVQFLRLLTSAFIRNRADFFRHFI 154 The following BLAST results are available for this feature:
BLAST of FC921320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921320 ID=FC921320; Name=FC921320; organism=Citrus clementina; type=EST; length=539bpback to top |