FC921466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_PONAB (Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSV----QDFIICIEVCL 584 + Y+ ++ N SQ +A+YCL+ FY V K+EL+ I+P+ KFL K +VF+++WQ V IALL +G+ Q +V QDFIICIE+ L Sbjct: 210 WTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFL 303
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_BOVIN (Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSV----QDFIICIEVCL 584 + Y+ ++ N SQ +A+YCL+ FY V K+EL+ I+P+ KFL K +VF+++WQ V IALL +G+ Q +V QDFIICIE+ L Sbjct: 210 WTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFL 303
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_MOUSE (Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSV----QDFIICIEV 578 + Y+ ++ N SQ +A+YCL+ FY V K+EL+ I+P+ KFL K +VF+++WQ V IALL LG+ Q +V QDFIICIE+ Sbjct: 210 WTYLVILNNLSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVLIALLVKLGVISEKRTWEWQSAEAVATGLQDFIICIEM 301
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_HUMAN (Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSV----QDFIICIEVCL 584 + Y+ ++ N SQ +A+YCL+ FY V K+EL+ I+P+ KFL + +VF+++WQ V IALL +G+ Q +V QDFIICIE+ L Sbjct: 210 WTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVRLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFL 303
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_RAT (Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSV----QDFIICIEV 578 + Y+ ++ N SQ +A+YCL+ FY V K+EL+ I+P+ KFL K +VF+++WQ V IALL +G+ Q +V QDFIICIE+ Sbjct: 210 WTYLVILNNLSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVLIALLVKVGVISEKRTWEWQSAEAVATGLQDFIICIEM 301
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_CHICK (Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 47/157 (29.94%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 165 LREFCCLKNRCLFELVVLTVNFSRSETVGSYQWNLIKKSLILCAFLCFC-------------RYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSV----QDFIICIEVCL 584 L CC + + E+++ +G Q+ +++ + A +C + Y+ ++ N SQ +A+YCL+ FY V ++EL I+P+ KFL K +VF+++WQ V IALL +G+ Q +V QDFIIC+E+ L Sbjct: 151 LPPLCCCPSWAMGEVLLFRCK------LGVLQYTVVRPFTTIIALICELVGVYDEGNFSFDNAWTYLVILNNMSQLFAMYCLVLFYKVLREELNPIQPVGKFLCVKMVVFVSFWQAVLIALLVKVGVISEKHTWEWQSVEAVATGLQDFIICVEMFL 301
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_XENTR (Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKS--------PIAQGLQFKSSVQDFIICIEVCLPSSSNIF 605 + Y+ ++ N SQ +A+YCL+ FY V K+EL I+P+ KFL K +VF+++WQ V IA+L G+ + +A GL QDFIIC+E+ L + ++ F Sbjct: 208 WTYLVIINNVSQVFAMYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQAVFIAILVKAGVISNTWEWKKVQDVATGL------QDFIICVEMFLAAVAHHF 306
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184C_XENLA (Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 315 YPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKS--------PIAQGLQFKSSVQDFIICIEVCL 584 + Y+ ++ N SQ +A+YCL+ FY V K+EL I+P+ KFL K +VF+++WQ V IA+L G+ + +A GL QDFIIC+E+ L Sbjct: 208 WTYLVIINNVSQVFAMYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQAVFIAILVKAGVISNTWEWKRVQDVATGL------QDFIICVEMFL 299
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 47/156 (30.13%), Postives = 76/156 (48.72%), Query Frame = 3 Query: 180 CLKNRCLFELVVLTVNFSRSETVGSYQWNLIKK-----SLILCAFLCF--------CRYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQ------FKSSVQDFIICIEVCLPS 590 CL C + ++ F R + Q+ L+K ++IL AF + Y Y+ ++ N S S ALY L FY T++ L +P+ KFLT K+++FL++WQG+ +A+L G+ G + Q+FIIC+E+ S Sbjct: 162 CLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKYHDGDFNVRSGYLYVTLIYNASVSLALYALFLFYFTTRELLRPFQPVLKFLTIKAVIFLSFWQGLLLAILERCGVIPEVETSGGNKLGAGTLAAGYQNFIICVEMLFAS 317
BLAST of FC921466 vs. ExPASy Swiss-Prot
Match: T184A_BOVIN (Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 3 Query: 180 CLKNRCLFELVVLTVNFSRSETVGSYQWNLIKK-----SLILCAFLCF--------CRYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYSLGLFK-------SPIAQGLQFKSSVQDFIICIEVCLPS 590 C C + ++ F R + Q+ ++K +++L AF + Y Y+ +V N S S ALY L FY+ T++ L +P+ KFLT K+++FL++WQG+ +A+L G+ S + G + Q+FIICIE+ S Sbjct: 152 CFHGTCCLRGMTYSIGFLRFCKQATLQFCIVKPIMALVTIVLQAFGKYHDGDFNVRSGYLYITLVYNASVSLALYALFLFYSATRELLQPFEPVLKFLTIKAVIFLSFWQGLLLAILERCGVIPEVQVIDGSTVGAG-TVAAGYQNFIICIEMLFAS 307 The following BLAST results are available for this feature:
BLAST of FC921466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921466 ID=FC921466; Name=FC921466; organism=Citrus clementina; type=EST; length=701bpback to top |