FC921473

Overview
NameFC921473
Unique NameFC921473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14304 contig Ccv1_Contig14304:44..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.942e-75
Identity = 134/208 (64.42%), Postives = 166/208 (79.81%), Query Frame = 3
Query:   75 YRLYPWLRYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSN---SLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQGLEFRAIVANEFKLGIPQALWSH 689
            Y LY  LR++LPPGP PWP++GNL D+KP R RCFAEW++ YGPI+SVW GS+LNVIVSNSELAK+VLK+ DQ LA+RHR ++ A  S+ G DL+WADYG HYVKVR+VCTLELFSPKR EALRPIRE+EV +M+ S++   T++ N    ++LRK+LG VAFNNITRL FGKRF + EGV+D QG+EF+AIV N  KLG   A+  H
Sbjct:   18 YTLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEH 225          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.346e-72
Identity = 131/208 (62.98%), Postives = 164/208 (78.85%), Query Frame = 3
Query:   75 YRLYPWLRYRLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDAT---NSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQGLEFRAIVANEFKLGIPQALWSH 689
            Y+L   LRY+ PPGP P PI+GNL D+KP R RC+ EW++ YGPI+SVWIGS LNV+VS++ELAK+VLK+ DQ+LA+RHR ++    S+ G DL+WADYG HYVKVR+VCTLELF+PKR E+LRPIRE+EV AM+ S+F+D     N +  L LRKYLG+VAFNNITRL FGKRF + EGVVD QGLEF+AIV+N  KLG   ++  H
Sbjct:   17 YKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEH 224          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.301e-64
Identity = 114/191 (59.69%), Postives = 145/191 (75.92%), Query Frame = 3
Query:  102 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDAT---NSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQGLEFRAIVANEFKLG 665
            RLPPGP PWP++GNL  +KP RCRCF EW++ YGP++SVW GS L V+VS SELAK+VLK+ DQQLA+R R ++    S+ G DL+WADYG HY+KVR++C LELF+PKR EALRPIRE+EV AM+ S+++ AT   N    +V+R +L  VAFNNITRL FGKRF +  G +D QG EF+ IV N  K+G
Sbjct:   30 RLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIG 220          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 63/174 (36.21%), Postives = 100/174 (57.47%), Query Frame = 3
Query:  102 RLPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQG 623
            RLPPGPYPWPIIGN   V+    R     ++ YGPI+ +  GS   V+VS+SE AK  LK  D   A+R              D+ ++ YG H+ K+R++C LEL + KR E+ + +R+EE+ AMI SI++++ +   ++ + K + +   N + R++  K+F   +   DG+G
Sbjct:   41 RLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKG 214          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24
Identity = 65/169 (38.46%), Postives = 99/169 (58.58%), Query Frame = 3
Query:   96 RYRLPPGPYPWPIIGNLLDV-KPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESE 599
            RY+LPPGP P P+IGNLL + K +  R FA W+K YGPI+S  IGS   V++S++ELAK++LK  D   A+R   +    IS G  D+    Y  +Y ++R++    LFSP R    + +REEE R M+  I K A + S  + + + + +   + + R  FGK++  +
Sbjct:   27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINK-AADKSEVVDISELMLTFTNSVVCRQAFGKKYNED 194          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 60/170 (35.29%), Postives = 101/170 (59.41%), Query Frame = 3
Query:   96 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEE 602
            +++LPPGP P P+ GN L V  D   R  ++++K +G I  + +G    V+VS+ ELAK+VL     +  +R R     I +  G D+V+  YG H+ K+RR+ T+  F+ K  +  R   EEE   ++  + K+  +++N +VLR+ L  + +NN+ R++F +RFESE+
Sbjct:   30 KFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMYNNMYRIMFDRRFESED 199          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23
Identity = 71/206 (34.47%), Postives = 111/206 (53.88%), Query Frame = 3
Query:  105 LPPGPYPWPIIGNLLD-VKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVDGQGLEFRAIVANEFKLG--------IPQALWSHQL 695
            +PPGP+  PIIG++   V     R   + +K YGP+M + +G  + +IVS++E AK+V+K  D   A+R R     I+  G TD+ ++ YG ++ +VR++C +EL S KR ++L PIREEEV+ +I  I   A+   + + L + + S+ F   +R  FGKR+  +E        EF + V    KL          P A W   L
Sbjct:   19 IPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRI---ASEEGSVVNLSQAIDSLIFTITSRSAFGKRYMEQE--------EFISCVREVMKLAGGFNIADLFPSAKWLENL 213          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23
Identity = 66/202 (32.67%), Postives = 108/202 (53.47%), Query Frame = 3
Query:  105 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKR-FESEEGVVDGQGLEFRA------IVANEFKLG--IPQALW 683
            LPPGP PWPIIGNL+ + P   +  A  ++ YGP+M + +G    V+ +++ +A Q LK  D   ++R        ++    DLV+A YG  +  +R++C++ LFS K  +  R +R++EV+ +  ++   A+     + L + L     N + R++ GKR F    G VD Q  EF++      +VA  F +G  IPQ  W
Sbjct:   33 LPPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRAL---ASAGQKPVKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVFNIGDFIPQLNW 231          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 60/170 (35.29%), Postives = 99/170 (58.24%), Query Frame = 3
Query:   96 RYRLPPGPYPWPIIGNLLDVKPD-RCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEE 602
            R++LPPGP P P+ GN L V  D   R   + +K +G I+ + +G    V+VS+ EL+K+VL     +  +R R     I +  G D+V+  YG H+ K+RR+ T+  F+ K  +  R   EEE   ++  + K+   +++ +VLR+ L  + +NN+ R++F +RFESEE
Sbjct:   30 RFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEE 199          
BLAST of FC921473 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 59/170 (34.71%), Postives = 102/170 (60.00%), Query Frame = 3
Query:  105 LPPGPYPWPIIGNLLDVKPDRCRCFAEWSKIYGPIMSVWIGSSLNVIVSNSELAKQVLKDCDQQLANRHRPKAVAIISKGGTDLVWADYGAHYVKVRRVCTLELFSPKRTEALRPIREEEVRAMIASIFKDATNSSNSLVLRKYLGSVAFNNITRLVFGKRFESEEGVVD 614
            LPP P+  P+IGNL  +     R  +  S  +GP+M +  G    +IVS++++A  V+K  D + ANR   K+   IS GG DLV+A YG ++  V+ +CT+ L S K  ++    REEE+  ++ ++ ++A+ SS+S+ L K + ++  + + ++V GK++  EEG +D
Sbjct:   32 LPPSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL-EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEEGTID 200          
The following BLAST results are available for this feature:
BLAST of FC921473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
C98A2_SOYBN4.942e-7564.42Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH1.346e-7262.98Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI2.301e-6459.69Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C75A1_PINTA9.450e-2636.21Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C83A1_ARATH1.365e-2438.46Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_CATRO1.155e-2335.29Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C71DB_LOTJA2.574e-2334.47Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
F3PH_PETHY7.488e-2332.67Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
TCMO_POPTM1.277e-2235.29Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C71AG_ARATH1.277e-2234.71Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32105D04EF RVDevelopN Citrus clementina cDNA clone C32105D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921473 ID=FC921473; Name=FC921473; organism=Citrus clementina; type=EST; length=707bp
GACCTATAATTTTATTTCTTTAAATGGAACTCTTTCTCTTTATCATATCG
ATCATCATCTTCATCTTATTCGTTTACAGACTCTATCCATGGCTGAGATA
CAGGCTCCCACCTGGCCCATATCCATGGCCAATCATAGGAAACCTGTTGG
ATGTAAAACCAGACAGATGCCGGTGTTTTGCTGAGTGGTCAAAGATTTAC
GGTCCAATCATGTCCGTATGGATAGGCTCATCATTGAATGTTATAGTGTC
AAATTCAGAACTGGCCAAGCAAGTGCTCAAAGACTGTGACCAGCAGTTGG
CCAATAGGCACCGACCCAAGGCAGTGGCTATCATTTCCAAAGGTGGTACG
GATCTTGTATGGGCCGATTATGGGGCCCACTATGTTAAGGTGCGAAGAGT
ATGCACCCTTGAACTCTTCTCCCCAAAAAGGACAGAGGCCCTTAGGCCCA
TTAGAGAAGAGGAAGTTAGAGCCATGATTGCTTCTATTTTCAAAGACGCC
ACCAATAGCAGTAACAGTTTGGTTCTGAGGAAGTATTTGGGTTCCGTGGC
TTTCAACAACATTACAAGACTAGTGTTTGGGAAGAGATTTGAGAGCGAAG
AAGGGGTAGTGGATGGCCAAGGACTGGAATTCAGGGCAATTGTTGCTAAC
GAGTTCAAGCTTGGAATCCCACAGGCCTTGTGGAGCCATCAGCTGGCTAA
NGTGGAT
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