FC921485

Overview
NameFC921485
Unique NameFC921485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG1_DANRE (CTP synthase 1 OS=Danio rerio GN=ctps PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.848e-39
Identity = 80/132 (60.61%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASS+G ILK+CGL VT+IKIDPY+N DAGT SP+EH                 NYERFLDI+LT+DNN+TTGKIYQSVI+KERRGDYL KTVQVVPHITDAIQ+W+ R A IP
Sbjct:    1 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTAIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQSVINKERRGDYLGKTVQVVPHITDAIQEWVMRQAKIP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG1_MOUSE (CTP synthase 1 OS=Mus musculus GN=Ctps PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.748e-38
Identity = 79/132 (59.85%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASS+G ILK+CGL VTSIKIDPY+N DAGT SP+EH                 NYERFLDI+LT+DNN+TTGKIYQ VI+KER+GDYL KTVQVVPHITDAIQ+W+ R A+IP
Sbjct:    1 MKYILVTGGVISGIGKGVIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG1_HUMAN (CTP synthase 1 OS=Homo sapiens GN=CTPS PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.748e-38
Identity = 79/132 (59.85%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASS+G ILK+CGL VTSIKIDPY+N DAGT SP+EH                 NYERFLDI+LT+DNN+TTGKIYQ VI+KER+GDYL KTVQVVPHITDAIQ+W+ R A+IP
Sbjct:    1 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG2_BOVIN (CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.087e-38
Identity = 79/132 (59.85%), Postives = 89/132 (67.42%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASSIG ILK+CGLRVT+IKIDPY+N DAGT SP+EH                 NYERFLDI L +DNNITTGKIYQ VI+KERRGDYL KTVQVVPHITDA+Q+W+   AM+P
Sbjct:    1 MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQVVPHITDAVQEWVMNQAMVP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYG1A_XENLA (CTP synthase 1-A OS=Xenopus laevis GN=ctps-A PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.933e-37
Identity = 79/132 (59.85%), Postives = 90/132 (68.18%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASSIG ILK+  L VTSIKIDPY+N DAGT SP+EH                 NYERFLDI+LT+DNN+TTGKIYQSVI+KER+GDYL KTVQVVPHITDAIQ+W+ R A+IP
Sbjct:    1 MKYILVTGGVISGIGKGVIASSIGTILKSSNLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQSVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG2_HUMAN (CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.525e-37
Identity = 78/132 (59.09%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASSIG ILK+CGLRVT+IKIDPY+N DAGT SP+EH                 NYERFLDI L +DNNITTGKIYQ VI+KERRGDYL KTVQVVPHITDA+Q+W+   A +P
Sbjct:    1 MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQVVPHITDAVQEWVMNQAKVP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG2_XENLA (CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 78/132 (59.09%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASSIG ILK+CGLRVT+IKIDPY+N DAGT SP+EH                 NYERFLDI L +DNNITTGKIYQ VI++ERRGDYL KTVQVVPHITDAIQ+W+   A +P
Sbjct:    1 MKYILVTGGVISGVGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQQVINRERRGDYLGKTVQVVPHITDAIQEWVLNQAKVP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG2_RAT (CTP synthase 2 OS=Rattus norvegicus GN=Ctps2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 79/131 (60.31%), Postives = 87/131 (66.41%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMI 726
            MKY                ASSIG ILK+CGLRVT+IKIDPY+N DAGT SP+EH                 NYERFLDI L +DNNITTGKIYQ VI+KERRGDYL KTVQVVPHITDAIQDW+   A +
Sbjct:    1 MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQVVPHITDAIQDWVMNQAKV 131          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYG1B_XENLA (CTP synthase 1-B OS=Xenopus laevis GN=ctps-B PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 77/132 (58.33%), Postives = 90/132 (68.18%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASS+G ILK+  L VTSIKIDPY+N DAGT SP+EH                 NYERFLDI+LT+DNN+TTGKIYQSVI+KER+GDYL KTVQVVPHIT+AIQ+W+ R A+IP
Sbjct:    1 MKYILVTGGVISGIGKGVIASSVGTILKSSNLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQSVINKERKGDYLGKTVQVVPHITEAIQEWVMRQALIP 132          
BLAST of FC921485 vs. ExPASy Swiss-Prot
Match: PYRG2_CHICK (CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.593e-37
Identity = 77/132 (58.33%), Postives = 87/132 (65.91%), Query Frame = 1
Query:  334 MKYXXXXXXXXXXXXXXXXASSIGVILKACGLRVTSIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLXKTVQVVPHITDAIQDWIERVAMIP 729
            MKY                ASSIG ILK+CGLRVT+IKIDPY+N DAGT SP+EH                 NYERFLDI L +DNNITTGKIYQ VI+KER GDYL KTVQVVPHITDA+Q+W+   A +P
Sbjct:    1 MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERHGDYLGKTVQVVPHITDAVQEWVMNQAKVP 132          
The following BLAST results are available for this feature:
BLAST of FC921485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG1_DANRE7.848e-3960.61CTP synthase 1 OS=Danio rerio GN=ctps PE=1 SV=1[more]
PYRG1_MOUSE1.748e-3859.85CTP synthase 1 OS=Mus musculus GN=Ctps PE=1 SV=2[more]
PYRG1_HUMAN1.748e-3859.85CTP synthase 1 OS=Homo sapiens GN=CTPS PE=1 SV=2[more]
PYRG2_BOVIN5.087e-3859.85CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1[more]
PYG1A_XENLA1.933e-3759.85CTP synthase 1-A OS=Xenopus laevis GN=ctps-A PE=2 ... [more]
PYRG2_HUMAN2.525e-3759.09CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1[more]
PYRG2_XENLA4.306e-3759.09CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=... [more]
PYRG2_RAT4.306e-3760.31CTP synthase 2 OS=Rattus norvegicus GN=Ctps2 PE=2 ... [more]
PYG1B_XENLA7.345e-3758.33CTP synthase 1-B OS=Xenopus laevis GN=ctps-B PE=2 ... [more]
PYRG2_CHICK9.593e-3758.33CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32105E04EF RVDevelopN Citrus clementina cDNA clone C32105E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921485 ID=FC921485; Name=FC921485; organism=Citrus clementina; type=EST; length=730bp
GAAAGCAAAGCAGACACGAAAAGATTTGGTGGGTGTATGCGGAATTGTAG
AGTCTCTCTTTTGTTATCTATTTTTGCTTTTTGGGTTTTTGTTTCACATT
ACAGCATTGAGATTACAAAGGAAAAAGAAAAATCTTTCTTCTTAGTCGAA
GAGAAAAGAGCGTGTAGTCACAAACAAGATAAACATAGACATAGAGATAA
ACACAGAACAGAAGCAGAGAGAGAGAGAGGGGCGGGAAGGCAGGCAGGCA
GGCAGGCAAAAGCAAATTATTAAACTTTGTAAAGACCGTCATTGTTAACA
AGTGAGTGAGTGAGTGAAGAGTCATAATCAAATATGAAGTACGTTTTGGT
GACTGGTGGCGTTGTTAGTGGACTGGGTAAAGGCGTCACTGCCAGTAGCA
TCGGTGTTATTCTTAAAGCATGTGGTCTCCGTGTTACTTCTATCAAGATT
GATCCTTACTTGAACACTGATGCCGGAACAATGTCCCCTTTTGAGCATGG
AGAGGTTTTTGTCTTAGACGATGGTGGTGAGGTGGACCTAGATCTTGGTA
ACTACGAGCGGTTTCTAGACATCAAGTTAACCCGTGACAACAATATAACG
ACTGGAAAAATATATCAGTCTGTTATTGACAAGGAGAGAAGGGGAGATTA
TCTTNGGAAAACTGTCCAGGTTGTTCCACACATTACAGATGCTATTCAAG
ACTGGATAGAACGTGTAGCAATGATTCCAG
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