FC921516

Overview
NameFC921516
Unique NameFC921516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14164 contig Ccv1_Contig14164:14..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921516 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.583e-51
Identity = 98/189 (51.85%), Postives = 140/189 (74.07%), Query Frame = 2
Query:  107 KSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGINEE---XTRFSSAFDDASAM 664
            ++  K+  Y P+ GT+ N  +NF RLH Y TD A ++ T+R++ P  S V+++DP NVE++LKTNF NY KG++NY I+KDLLGDGIF VDG+KWR+QRK++S EF++KVL+DFSS  F  NAAKLA +L++AA  +  +++QDLFM+S+LDSI KV FG++++S+     E      F+ AFD A+AM
Sbjct:   28 RNWRKKGVYPPVVGTMLNHAINFERLHDYHTDQAQRYKTFRVVYPTCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFSSGVFCNNAAKLANILAQAAKLNLSVEMQDLFMRSSLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAM 216          
BLAST of FC921516 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.056e-28
Identity = 74/195 (37.95%), Postives = 114/195 (58.46%), Query Frame = 2
Query:   92 KTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDL--AAKHGTYRLLGPFRS-EVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAA-KLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGINEEXTRFSSAFDDASAM 664
            KT +  +     K +PI G+ F+ L NF+R   + +D+       T+ L  PF + +V+++ PA V+++L+TNF  YGKG   Y  + D LGDGIF  DGE W+ QR+ISSHEF+T+ LR F         + +L  +LS+A+NS   LD QD+  + T D+I  +AFG + + +     E   F+ AFD++S +
Sbjct:   32 KTPSSTTNTPIPKSYPIFGSAFSLLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNSQTTLDFQDILQRLTFDNICMIAFGYDPEYLLPSLPEIP-FAKAFDESSQL 225          
BLAST of FC921516 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.204e-21
Identity = 54/181 (29.83%), Postives = 106/181 (58.56%), Query Frame = 2
Query:  128 KYHPIGGTVFNQLLNFNRLHHYMTDLA--AKHGTYRLLGPF-RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDF-SSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGINEEXTRFSSAFDDAS 658
            K +P+ G+  +   N +R   +++D+   +   T++L G   + ++ + +P+ V+++LK  F NY KG+   + L D LG GIF  +G  W+ QR+++SHEF+TK +R+F       +   +L  +L+ +  ++ ILD QD+  + T D+I  +AFG + + +   +   ++F+ A++DA+
Sbjct:   49 KSYPLIGSYLSFRKNLHRRIQWLSDIVQISPSATFQLDGTLGKRQIITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSSTQTNNILDFQDILQRFTFDNICNIAFGYDPEYLTP-STNRSKFAEAYEDAT 228          
BLAST of FC921516 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.079e-20
Identity = 67/188 (35.64%), Postives = 106/188 (56.38%), Query Frame = 2
Query:  128 KYHPIGGTVFNQLLNFNRLHHYMTD-LAAKHGTYR---LLGPFRSEVY-----SSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAK--LAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGINEEXTRFSSAFDDAS 658
            K  P  G++   + N +R+H ++ D L A  GTY+   ++ PF ++       +  P NVE++LKT FDNY KG    +   DLLG GIF  DG+ W  QRK ++ EF+T+ LR  + A +     K  L  +L  A  ++K +D+QDLF++ T D+I  + FG + +++  ++     FS AFD A+
Sbjct:   34 KVLPFVGSLPYLIANRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQ-AMARWVNGTIKNRLWLILDRAVQNNKPVDLQDLFLRLTFDNICGLTFGKDPETL-SLDLPDNPFSVAFDTAT 219          
BLAST of FC921516 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20
Identity = 64/190 (33.68%), Postives = 101/190 (53.16%), Query Frame = 2
Query:  119 KQKKYHPIGGTVFNQLLNFNRLHHYMTD-LAAKHGTYRLL---GPFRSE-----VYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKN-AAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGINEEXTRFSSAFDDAS 658
            K  +  P+ G++   +   +R+H ++T+ L A  GTY+      PF ++       + DP N+E+MLKT FDNY KG    ++  D LG GIF  DG+ W  QRK ++ EF+T+ LR        +    +   +L  A N+ + +D+QDL ++ T D+I  +AFG +    C        F+SAFD A+
Sbjct:   28 KGPRVWPVLGSLPGLIEQRDRMHDWITENLRACGGTYQTCICAVPFLAKKQGLVTVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPVDLQDLILRLTFDNICGLAFGKD-TRTCAPGLPENGFASAFDRAT 216          
The following BLAST results are available for this feature:
BLAST of FC921516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C04C1_PINTA2.583e-5151.85Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
C94A2_VICSA1.056e-2837.95Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C94A1_VICSA6.204e-2129.83Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C86A1_ARATH3.079e-2035.64Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH4.021e-2033.68Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
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Properties
Property NameValue
Genbank descriptionC32105H04EF RVDevelopN Citrus clementina cDNA clone C32105H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921516 ID=FC921516; Name=FC921516; organism=Citrus clementina; type=EST; length=666bp
GTGATAATTCCATGGGATTTCCTCTCAATCCCTNTTCTCGTTCAAAGCCT
TAGCTATTGCTCTTGCAATTCTTGTTGTTCAAATCGTCACAAAAACACTG
ACGCAAAAGAGTGGCAATAAACAAAAGAAGTACCATCCGATTGGCGGGAC
AGTGTTTAACCAGCTACTAAATTTCAATAGATTACACCATTACATGACAG
ATCTTGCTGCCAAGCATGGGACTTACAGACTGCTGGGCCCTTTTAGAAGT
GAAGTTTACAGTTCCGACCCGGCCAACGTTGAATACATGCTTAAAACAAA
TTTTGATAATTATGGCAAGGGAAGTTACAATTACAGCATCCTCAAGGATT
TACTTGGTGATGGGATTTTTACTGTTGACGGCGAAAAGTGGCGAGAACAG
AGAAAGATATCAAGCCACGAGTTCTCAACAAAGGTGCTCAGAGATTTTAG
CAGCGCGGCCTTTAGAAAAAATGCGGCAAAGCTTGCTCAACTACTTTCTG
AAGCTGCAAATTCCGACAAGATATTGGACATTCAAGACTTGTTTATGAAA
TCAACCTTAGATTCGATATTTAAAGTGGCGTTTGGAGTTGAACTAGACAG
CGTGTGCGGAATCAATGAAGAANGTACCCGTTTCAGCAGTGCTTTTGATG
ATGCAAGTGCGATGAC
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