FC921527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 +D+NS++G+ +PLA +R+GT +H+IE +PGQG KL RAAGT AKI+KEP S CLVRLPSG EKLID+RCRATIG VSNP+HGA+KL KAGQS Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQS 445
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 +D+NS++G+ +PLA +R+GT +H+IE +PGQG KL RAAGT AKI+KEP S CLVRLPSG EKLID+RCRATIG VSNP+HGA+KL KAGQS Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQS 445
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 65/93 (69.89%), Postives = 80/93 (86.02%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 +D+NS++G+ +PLA +R+GT +H+IE +PGQG KL RAAGT AKI+KEP S CLVRLPSG EKLID+RCRATIG VSNP+HGA+KL KAGQS Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQS 445
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 1 Query: 424 IGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKIL-KEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 +G+C+PLA + IGT +HNIE NPGQG KL RAAGT A+I+ K + C+VRLPSG +KLID+RCRATIG VSN +HG +K KAGQS Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFNKAGQS 446
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RM02_RECAM (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana GN=RPL2 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 DI+ +IG+ +PL + IGT+IHNIE+NPG+GGK+VR+AG+SA+++ + + FC+++LPSG +L ATIG +SN + K+ KAG+S Sbjct: 121 DIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKDENGFCMLKLPSGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRS 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_STRSY (50S ribosomal protein L2 OS=Streptococcus suis (strain 05ZYH33) GN=rplB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 45/88 (51.14%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N HG L KAG+S Sbjct: 125 KVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLGQ-EGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_STRS2 (50S ribosomal protein L2 OS=Streptococcus suis (strain 98HAH33) GN=rplB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 45/88 (51.14%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N HG L KAG+S Sbjct: 125 KVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLGQ-EGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACHK (50S ribosomal protein L2 OS=Bacillus thuringiensis subsp. konkukian GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRAT+G V N SH K+ KAG+S Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACCZ (50S ribosomal protein L2 OS=Bacillus cereus (strain ZK / E33L) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRAT+G V N SH K+ KAG+S Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACC7 (50S ribosomal protein L2 OS=Bacillus cereus (strain AH187) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRAT+G V N SH K+ KAG+S Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211 The following BLAST results are available for this feature:
BLAST of FC921527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921527 ID=FC921527; Name=FC921527; organism=Citrus clementina; type=EST; length=695bpback to top |