FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:9..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.540e-68
Identity = 131/200 (65.50%), Postives = 158/200 (79.00%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            S S AQL+  FY+TTCPN S I+  V+Q A  +D RI  SLIRLHFHDCFV+GCDGS+LLDN  N T+I SEK ++ N NS RGF+VVD +K A+E+ACPG+VSC DILA+ASE SV+L+GGPSW V LGRRD RTAN+  A+ +LP+PF+ L  L  +FTNVGLN N DLVALSGAHTFGRAQC+ FS RLF+F+ TGN
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDN--NGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVN-DLVALSGAHTFGRAQCRTFSPRLFNFSNTGN 215          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.378e-66
Identity = 128/199 (64.32%), Postives = 154/199 (77.39%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI  SLIRLHFHDCFVNGCDGS+LLD+ +   SI SEK + AN NS RGF VVD++K ALE+ACPGIVSC+DILA+ASE SV+L+GGPSWTV LGRRDG TAN S A+ +LP+PF+ L+ +  +F  VGL   TD+V+LSGAHTFGR QC  F+ RLF+FNGTGN
Sbjct:   28 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTS---SIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLK-TTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGN 222          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.629e-65
Identity = 124/199 (62.31%), Postives = 146/199 (73.37%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQLTP FY+ +CPN SNI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+ESACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGLN ++DLVALSG HTFG+ QC+F   RL++F+ TG
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTG 221          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.305e-64
Identity = 123/199 (61.81%), Postives = 147/199 (73.87%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQLTP FY+T+CPN SNI+  ++ N   SD RITAS++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF  VD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F  VGL+  +DLVALSG HTFG+ QC+F   RL++F+ TG
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNT---TSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTG 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.225e-64
Identity = 123/199 (61.81%), Postives = 145/199 (72.86%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQLTP FY+ +CPN SNI+  ++ N   SD  I AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF VVD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW VPLGRRD R A   LA+ NLP P  TL  LK  F NVGLN  +DLVALSG HTFG+ QC+F   RL++F+ TG
Sbjct:    5 SFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTG 200          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.906e-64
Identity = 125/199 (62.81%), Postives = 153/199 (76.88%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI ASLIRLHFHDCFVNGCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ACPG+VSC+D+LA+ASE SV+L+GGPSWTV LGRRD  TAN + A+ ++P+P ++L  +  +F+ VGLN N DLVALSGAHTFGRA+C  F+ RLF+F+GTGN
Sbjct:   27 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG---SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTGN 221          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.104e-63
Identity = 121/199 (60.80%), Postives = 145/199 (72.86%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQLTP FY+T+CP  +NI+   + N   SD RI  S++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSGAHTFG+ QC+F   RL++F+ TG
Sbjct:   27 SFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNT---TSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTG 222          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.884e-63
Identity = 122/199 (61.31%), Postives = 144/199 (72.36%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQLTP FY+ +CPN +NI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTFG+ QCQF   RL++F+ TG
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTG 221          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 1.884e-63
Identity = 122/199 (61.31%), Postives = 145/199 (72.86%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQLTP FY+ TCP+   I+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E+ACP  VSCADIL IA++Q+VNL+GGPSW VPLGRRD   A  +LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTFG+ QCQF   RL++F+ TG
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTG 220          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.595e-62
Identity = 120/199 (60.30%), Postives = 144/199 (72.36%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQL+P FY+ TCP   +I    + NA  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF+V+D MKAA+E ACP  VSCAD+LAIA+++SV L+GGPSW VP GRRD       LA+ NLP PF TL+ LK RF NVGL+  +DLVALSG HTFG+ QCQF   RL++F+ TG
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTG 213          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER15_IPOBA2.540e-6865.50Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER54_ARATH2.378e-6664.32Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER1A_ARMRU2.629e-6562.31Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1B_ARMRU1.305e-6461.81Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1C_ARMRU2.225e-6461.81Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER53_ARATH2.906e-6462.81Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER33_ARATH1.104e-6360.80Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER34_ARATH1.884e-6361.31Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER32_ARATH1.884e-6361.31Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER37_ARATH1.595e-6260.30Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
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