FC921544

Overview
NameFC921544
Unique NameFC921544
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: POT4_ARATH (Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2)

HSP 1 Score: 396.356 bits (1017), Expect = 7.740e-110
Identity = 184/229 (80.35%), Postives = 206/229 (89.96%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLIQ 687
            IYGQIYIPEINWILMILTLA+ IGF+DTTLIGNAYG+ACM VMFITTF MAL+I+ VW KS             IEGVYLSAA +KV +GGWVP VL+ +FM+ MY+WHYGTR+KY+FDLHNKVSL+WLLGLGPSLGIVRVPGIGL+YSELATGVPAIFSHFVTNLPAFHKV+VFVCVKSVPVP+VSPEERFLIGRVCP+PYRMYRCIVRYGYKD+QR+DG+FENQL+Q
Sbjct:  389 IYGQIYIPEINWILMILTLAMAIGFRDTTLIGNAYGIACMVVMFITTFFMALVIVVVWQKSCFLAALFLGTLWIIEGVYLSAALMKVTEGGWVPFVLTFIFMIAMYVWHYGTRRKYSFDLHNKVSLKWLLGLGPSLGIVRVPGIGLVYSELATGVPAIFSHFVTNLPAFHKVVVFVCVKSVPVPHVSPEERFLIGRVCPKPYRMYRCIVRYGYKDIQREDGDFENQLVQ 617          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: HAK7_ORYSJ (Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3)

HSP 1 Score: 360.533 bits (924), Expect = 4.706e-99
Identity = 168/228 (73.68%), Postives = 197/228 (86.40%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            I+GQIYIPEINWILM+L LA+T+GF+DTT+IGNAYGLAC+ VMF+TT+LMAL+IIFVW K+I            IE VYLSAA  KVPQGGW P+V + VFM+VMY+WHYG+R+KY FDL NKVS++W+L LGPSLGIVRVPGIGLIY+EL TGVP+IFSHFVTNLPAFH+VLVFVCVKSVPVP+V  +ER+LIGR+ PR YRMYRCIVRYGYKDVQ+DD NFEN L+
Sbjct:  415 IHGQIYIPEINWILMVLCLAVTLGFRDTTVIGNAYGLACIVVMFVTTWLMALVIIFVWQKNILLALLFVVAFGSIEVVYLSAAVTKVPQGGWAPIVFAFVFMLVMYVWHYGSRRKYLFDLQNKVSMKWILTLGPSLGIVRVPGIGLIYTELVTGVPSIFSHFVTNLPAFHQVLVFVCVKSVPVPFVPEDERYLIGRIGPREYRMYRCIVRYGYKDVQKDDENFENHLV 642          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: HAK2_ORYSJ (Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.706e-99
Identity = 167/228 (73.25%), Postives = 196/228 (85.96%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            IYGQIYIPEINWILM+L +A+T+ F+D TLIGNAYG+ACMTVMF+TTFLMALI+IFVW K+I            +E VYLS++ +KV QGGWVPLVL+ +FM VMYIWHYGTRKKY +DL NKVS+R++L LGPSL +VRVPGIGLIY+EL TGVP IF+HF TNLPAFH+VLVF+CVKSVPVPYVSP+ER+L+GR+ PR YRMYRCIVRYGYKDVQRDD NFEN L+
Sbjct:  387 IYGQIYIPEINWILMVLCVAVTVAFRDITLIGNAYGVACMTVMFVTTFLMALIMIFVWQKNIIFALSFFLLFGSVEVVYLSSSLMKVTQGGWVPLVLALIFMSVMYIWHYGTRKKYQYDLQNKVSMRYILSLGPSLDVVRVPGIGLIYTELVTGVPNIFTHFTTNLPAFHEVLVFLCVKSVPVPYVSPDERYLVGRIGPRAYRMYRCIVRYGYKDVQRDDDNFENMLV 614          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: HAK3_ORYSJ (Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.123e-92
Identity = 157/228 (68.86%), Postives = 189/228 (82.89%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            I+GQIY PEINWILM+L +A+T+G +DTTLIGNAYG+AC  VM +TT LMAL+I+FVW  S             +E VYLSAA +KVPQGGW+PLVLS VF+ VMY+WHYGTR+K+ FD+ NKVSLRW+  LGPSLGIVRVPGIG+IYSELATGVPAIFSHFVTNLPAFH+VLVF+CVK+VPVP+V  EER L+GR+ PR +RMYRC+VR+GYKDV  +D +FEN L+
Sbjct:  403 IHGQIYSPEINWILMLLCIAVTMGLRDTTLIGNAYGMACAGVMLVTTLLMALVIVFVWQYSCLVAALFLVAFGVVEAVYLSAALMKVPQGGWLPLVLSLVFVAVMYVWHYGTRRKHQFDVQNKVSLRWIHALGPSLGIVRVPGIGIIYSELATGVPAIFSHFVTNLPAFHQVLVFICVKAVPVPHVRDEERHLVGRIGPREFRMYRCVVRHGYKDVLAEDTDFENDLV 630          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: HAK10_ORYSJ (Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.049e-87
Identity = 147/228 (64.47%), Postives = 184/228 (80.70%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            ++GQIYIPEINWILMIL LAITIGF+DT  +GNA GLA +TVM +TT LM+L+I+  W+KSI            IE +Y SA+ IK  +G WVP+VL+ +FM +M IWHYGT KKY FDL NKVS+ WLLGL P+LGIVRV GIGLI++EL +G+PAIFSHFVTNLPAFH+VL+F+C+K+VP+P+VSPEERFL+GR+ P+ YR+YRCIVRYGY DV +DD  FE +L+
Sbjct:  422 VHGQIYIPEINWILMILCLAITIGFRDTKHLGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAFGFIIFFGTIEALYFSASLIKFREGAWVPIVLAFIFMAIMCIWHYGTIKKYEFDLQNKVSINWLLGLSPNLGIVRVRGIGLIHTELDSGIPAIFSHFVTNLPAFHQVLIFLCIKNVPIPHVSPEERFLVGRIGPKEYRIYRCIVRYGYHDVHKDDQEFEKELV 649          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: HAK25_ORYSJ (Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.507e-84
Identity = 145/228 (63.60%), Postives = 180/228 (78.95%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            ++GQIYIPEINWILMIL LA+T+GF++T  + NA GLA +TVM +TT LM+L+I+  W KSI            IE +Y SA+ +K  +G WVP+ LS +FM+VM +WHYGT KKY FD  NKVS+ WLL LGPSLGIVRV GIGLI++EL +G+PAIFSHFVTNLPAFH+VLVF+CVKSVPVP+V PEERFL+GR+ P+ YR+YR IVRYGY+DVQ+DD  FE  L+
Sbjct:  391 VHGQIYIPEINWILMILCLAVTLGFRNTKHLANAQGLAVITVMLVTTCLMSLVIVLCWNKSIFLALGFLIFFGTIEVLYFSASLVKFHEGAWVPITLSFIFMIVMCVWHYGTIKKYEFDFQNKVSVNWLLNLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVQPEERFLVGRIGPKEYRLYRVIVRYGYRDVQKDDIEFEKDLV 618          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: HAK24_ORYSJ (Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.772e-83
Identity = 142/228 (62.28%), Postives = 181/228 (79.39%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            ++GQIYIPEINWILMIL L++TIGF+DT  + NA GLA +TVM +TT LM+L+I+  W KSI            IE +Y +A+ +K  +G WVP+ LS +FM+VM +WHYGT+KKY FD+ NKVS+ WLL +GPSLGIVRV GIGLI++EL +G+PAIFSHFVTNLPAFH+VLVF+C+KSV VP+V PEERFL+GR+ P+ YR+YR IVRYGY+DVQ+DD  FE  L+
Sbjct:  389 VHGQIYIPEINWILMILCLSVTIGFRDTKHLTNAQGLAVITVMLVTTCLMSLVILLCWNKSIVYALSFLLFFGAIEVIYFAASLVKFHEGAWVPVTLSFIFMMVMCVWHYGTKKKYEFDVQNKVSISWLLNIGPSLGIVRVRGIGLIHTELMSGIPAIFSHFVTNLPAFHQVLVFLCIKSVSVPHVQPEERFLVGRIGPKKYRIYRVIVRYGYRDVQKDDVEFEKDLV 616          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: POT6_ARATH (Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.196e-80
Identity = 136/228 (59.65%), Postives = 177/228 (77.63%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            I+GQIYIPEINWILM+L LA+TIGF+DT  +GNA GLA +TVM +TT LM+L+I+  W+KS+            IE +Y SA+ IK  +G WVP+ L+  F++ M  WHYGT K+Y +D+ NKVS+ WLL L  +LGI RV G+GLI++EL +GVPAIFSHFVTNLPAFH+VLVF+CVKSVPVP+V P+ERFL+GR+ P+ +R+YRCIVR+GY+DV +DD  FE  L+
Sbjct:  392 IHGQIYIPEINWILMVLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESLYFSASLIKFLEGAWVPIALAFCFLLAMCTWHYGTLKRYEYDVQNKVSVNWLLSLSQTLGIARVRGLGLIHTELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLVGRIGPKEFRIYRCIVRFGYRDVHKDDFEFEGDLV 619          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: POT8_ARATH (Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 8.346e-80
Identity = 139/230 (60.43%), Postives = 177/230 (76.96%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGL--GPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            ++GQIYIPEINW LM+L LA+T+GF+DT  I NA GLA +TVM +TT LM+L+I+  W KS             IE +Y SA+ IK  +G WVP+ LS +F+++MY+WHYGT K+Y FD+ NKVS+ WLL L    +LGIVRV GIG+I +EL +G+PAIFSHF+TNLPAFH+V+VF+CVKSVPVP+V PEERFL+GRV P+ YR+YRCI RYGY+DV +DD  FEN LI
Sbjct:  392 MHGQIYIPEINWTLMLLCLAVTVGFRDTKHISNASGLAVITVMLVTTCLMSLVIVLCWRKSSLYALAFIFFFGTIEVLYFSASLIKFLEGAWVPVALSFIFLLIMYVWHYGTLKRYEFDVQNKVSINWLLTLFGSSNLGIVRVHGIGVINTELVSGIPAIFSHFITNLPAFHQVVVFLCVKSVPVPHVKPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDVEFENDLI 621          
BLAST of FC921544 vs. ExPASy Swiss-Prot
Match: POT3_ARATH (Potassium transporter 3 OS=Arabidopsis thaliana GN=POT3 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.859e-79
Identity = 133/228 (58.33%), Postives = 181/228 (79.39%), Query Frame = 1
Query:    1 IYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIXXXXXXXXXXXXIEGVYLSAAFIKVPQGGWVPLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGNFENQLI 684
            + GQIYIPEINW++MILTLA+TI F+DT  I  A+GLACMT+ F+TT+LM LII FVW ++I            IE +++++A +K+P+GGW+ L+LS  F  + Y+WHYG+RKKY  D HNKV ++ +L LGPSLGI++VPG+GLIY+ELA+GVPA F HF+TNLPAF++V+VFVC K+VP+PYV  +ER+LIGR+ P+ YRMYRCI+R GYKDV +D  +FE++L+
Sbjct:  375 VLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFVTTWLMPLIINFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFITYVWHYGSRKKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTNLPAFYQVVVFVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFEDELV 602          
The following BLAST results are available for this feature:
BLAST of FC921544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
POT4_ARATH7.740e-11080.35Potassium transporter 4 OS=Arabidopsis thaliana GN... [more]
HAK7_ORYSJ4.706e-9973.68Potassium transporter 7 OS=Oryza sativa subsp. jap... [more]
HAK2_ORYSJ4.706e-9973.25Probable potassium transporter 2 OS=Oryza sativa s... [more]
HAK3_ORYSJ1.123e-9268.86Probable potassium transporter 3 OS=Oryza sativa s... [more]
HAK10_ORYSJ7.049e-8764.47Potassium transporter 10 OS=Oryza sativa subsp. ja... [more]
HAK25_ORYSJ2.507e-8463.60Potassium transporter 25 OS=Oryza sativa subsp. ja... [more]
HAK24_ORYSJ2.772e-8362.28Potassium transporter 24 OS=Oryza sativa subsp. ja... [more]
POT6_ARATH2.196e-8059.65Potassium transporter 6 OS=Arabidopsis thaliana GN... [more]
POT8_ARATH8.346e-8060.43Potassium transporter 8 OS=Arabidopsis thaliana GN... [more]
POT3_ARATH1.859e-7958.33Potassium transporter 3 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionC32106C06EF RVDevelopN Citrus clementina cDNA clone C32106C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921544 ID=FC921544; Name=FC921544; organism=Citrus clementina; type=EST; length=690bp
ATATATGGGCAGATATATATCCCAGAAATAAACTGGATCCTGATGATCCT
TACTCTTGCTATAACTATTGGGTTTCAGGACACAACTTTAATTGGAAATG
CTTATGGACTTGCTTGCATGACAGTTATGTTCATCACAACATTTCTCATG
GCACTTATCATAATCTTTGTCTGGTATAAAAGTATCTTTCTGGCTGGGGC
ATTCCTTTTATTCTTCTTGGCCATTGAAGGTGTTTACCTATCAGCAGCAT
TTATTAAAGTGCCTCAAGGAGGATGGGTCCCTCTTGTGCTCTCCTCTGTC
TTTATGGTTGTTATGTACATTTGGCATTATGGAACTCGCAAGAAGTACAA
TTTTGACCTGCATAACAAAGTTTCCTTAAGATGGTTACTTGGTCTGGGCC
CCAGCCTTGGTATCGTCCGTGTGCCTGGTATTGGCCTTATATACTCAGAA
TTGGCAACGGGGGTCCCTGCAATCTTCTCCCACTTTGTAACAAACCTGCC
AGCATTTCATAAGGTGCTGGTATTTGTTTGTGTAAAATCAGTTCCAGTGC
CATATGTTTCTCCTGAGGAACGCTTCCTTATTGGCCGTGTTTGCCCTCGG
CCGTACCGTATGTATAGGTGCATAGTGAGGTATGGTTACAAAGATGTTCA
GCGTGATGATGGCAATTTTGAGAACCAGCTCATTCAAGTA
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