FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.192e-86 Identity = 164/186 (88.17%), Postives = 175/186 (94.09%), Query Frame = 1 Query: 127 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 M+IS+Q DI G+RQ+GQDVRTQNVMACQAV+NIVK+SLGPVGLDKMLVDDIGDVTITNDGATIL+MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRE+CKY+ EKL KVEKLGK L+NCAKTSMS KLI GDSDFFANLVVEAV +VKMTN Sbjct: 1 MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTN 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 2.668e-70 Identity = 131/186 (70.43%), Postives = 162/186 (87.10%), Query Frame = 1 Query: 127 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 M+ + L I G RQ+G VRTQNVMA +++NIVKSSLGPVGLDKMLVDDIGDVT+TNDGATIL++LEVEHPAAKVLVELA+LQD EVGDGTTSVVI+AAELLK A++LV+ KIHPTSIISGYR+A +EACKY++E L V++LG+DSL+N AKTSMS K+IG D++FF+ +VV+A Q+VK+T+ Sbjct: 1 MSTLASPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITD 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.551e-70 Identity = 127/180 (70.56%), Postives = 161/180 (89.44%), Query Frame = 1 Query: 145 TLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 ++ ILGER GQDVRT NV A A+ANIVKSSLGP GLDKMLVDD+GDVTITNDGATIL+ LEV+HPAAKV+VEL++LQD+EVGDGTTSVVI+AAELLKRAN+L++NK+HPTSII+G+++A +EAC Y+ E LA+ VE+LG+++L+N AKTSMS KLIG +S+ F+ +VV+AV++VKMTN Sbjct: 4 SVGILGERDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTYIKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAVESVKMTN 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.551e-70 Identity = 131/179 (73.18%), Postives = 155/179 (86.59%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + GER G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTSII GYRLA +EA +Y+NE L + ++LGKD L+N AKTSMS K+IG D DFFAN+VV+AV AVK T+ Sbjct: 5 LSVFGERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.853e-69 Identity = 128/179 (71.51%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y+NE L V ++LG+D L+N AKTSMS K+IG + DFFAN+VV+AV A+K T+ Sbjct: 5 LSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 5.032e-69 Identity = 128/179 (71.51%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y+NE L + ++LG+D L+N AKTSMS K+IG + DFFAN+VV+AV AVK T+ Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 131/186 (70.43%), Postives = 154/186 (82.80%), Query Frame = 1 Query: 127 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 MA L +LGER +G VR QNV A +ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELAELQD+EVGDGTTSVVI+AAELLK +++LV+ KIHPTSII GYRLA +EA +Y+NE L + ++LG+D L+N AKTSMS K+IG D DFFA++VV+A AVK T+ Sbjct: 1 MAALEGPLAVLGERSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTD 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 127/179 (70.95%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y++E L + ++LG+D L+N AKTSMS K+IG + DFFAN+VV+AV AVK T+ Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68 Identity = 127/179 (70.95%), Postives = 156/179 (87.15%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y++E L + ++LG+D L+N AKTSMS K+IG + DFFANLVV+AV A+K T+ Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 258.455 bits (659), Expect = 2.497e-68 Identity = 127/179 (70.95%), Postives = 155/179 (86.59%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ VR+QNVMA ++ANIVKSS GPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y+NE L + ++LG+D L+N AKTSMS K+IG + D+FAN+VV+AV AVK T+ Sbjct: 5 LSVFGDRSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTD 183 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |