FC921602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184A_MOUSE (Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14 Identity = 48/155 (30.97%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG+ V + T + HL + P+EQ+ + PIYA DS++ LL + G P++ + DSV++CYEA VI F+ L + YL ++ + EI+G+ I S R + L+ K T QF +++P+ +++ I LQ Y Sbjct: 62 SGVFVWTALLLTGHQIYSHLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKY 212
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184A_RAT (Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 48/155 (30.97%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG+ V + T + HL + P+EQ+ + PIYA DS++ LL + G P++ + DSV++CYEA VI F+ L + YL ++ + EI+G+ I S R + L+ K T QF +++P+ +++ I LQ Y Sbjct: 62 SGVFVWTALLLTGHQIYSHLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKY 212
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184C_MOUSE (Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTIIL 657 +G+ ++LT+ ++ + QHL ++ P+ QK M PIY+VDS+V L+ K ++D+ +ECYEA VI FM + +YL I I+ E K ++ +H P+ P + L K Q+ V+RPI ++ + ++L +Y +WT+ +IL Sbjct: 52 AGIFLLLTIPVSLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALVYPK----IAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLILHLEAKDQQ-NHILPLCCCPPWA--MGEMLLFRCKLGVLQYTVVRPITTVTALVCEILDVYDEGNFGFSNAWTYLVIL 216
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG+ V + T + HL + P+EQ+ L+ PIYA DS++ LL + G ++ + DSV++CYEA VI F++L + YL + + EI+G+ I S R + L+ K T QF +++P+ ++ I LQ Y Sbjct: 59 SGIFVWTALVLTCHQIYLHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSFLSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKY 209
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184C_BOVIN (Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 48/172 (27.91%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTIIL 657 +G+ ++LT+ ++ ++ QHL ++ P+ QK M PIY++DS++ L ++D+ +ECYEA VI FM + +YL ++ E K ++ H P+ P T + L K Q+ V+RP +I+ + +LL IY +WT+ +I+ Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPSIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFP-PLCCCPPWT--MGEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDIYDEGNFSFSNAWTYLVII 216
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184C_RAT (Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 50/172 (29.07%), Postives = 87/172 (50.58%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIYPSW-----LSWTFTIIL 657 +G+ ++LT+ +M + QHL ++ P+ QK M PIY++DS+V L K ++D+ +ECYEA VI FM + +YL I ++ E K ++ +H P+ P + L K Q+ V+RPI ++ + ++L +Y +WT+ +IL Sbjct: 52 AGIFLLLTIPVSMCGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWVALKYPK----IAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLMLHLEAKDQQ-NHLPPLCCCPPWA--MGEMLLFRCKLGVLQYTVVRPITTVTSLVCEILGVYDEGNFSFSNAWTYLVIL 216
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184A_BOVIN (Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12 Identity = 46/155 (29.68%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG+ V + T + HL + P EQ+ + P+YA DS++ LL + G + + DSV++CYEA VI F++L + YL ++ + EI+G+ + S R + L+ K T QF +++PI +++ I LQ Y Sbjct: 49 SGVFVWAALVLTGHQIYLHLRSYTVPHEQRYIIRLLFIVPVYAFDSWLSLL-LLGGHQHYIYFDSVRDCYEAFVIYSFLSLCFQYLG---GESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLRFCKQATLQFCIVKPIMALVTIVLQAFGKY 199
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184B_HUMAN (Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12 Identity = 46/157 (29.30%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHS--FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG V + T + HL + P EQ+ + PIYA DS++ LL + ++ + +V++CYEALVI F++L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ Y Sbjct: 50 SGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKY 200
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184B_BOVIN (Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12 Identity = 46/157 (29.30%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHS--FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG V + T + HL + P EQ+ + PIYA DS++ LL + ++ + +V++CYEALVI F++L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ Y Sbjct: 50 SGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNFLSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVVLQAFGKY 200
BLAST of FC921602 vs. ExPASy Swiss-Prot
Match: T184B_MOUSE (Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 45/157 (28.66%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 157 SGLCVMLTMHFTMRLLQQHLFYWKNPKEQKAXXXXXLMAPIYAVDSFVGLLDIKGSKPFFTFLDSVKECYEALVIAKFMALMYSYLKISISKNIVPDEIKGREIHHS--FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPICSILMITLQLLRIY 621 SG V + T + HL + P EQ+ + PIYA DS++ LL + ++ + +V++CYEA VI F++L Y YL ++ + EI+G+ I S + +T + L+ K T QF V++P+ ++ + LQ Y Sbjct: 50 SGFFVWTALLITCHQIYMHLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEAFVIYNFLSLCYEYLG---GESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFCVVKPLMAVSTVILQAFGKY 200 The following BLAST results are available for this feature:
BLAST of FC921602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921602 ID=FC921602; Name=FC921602; organism=Citrus clementina; type=EST; length=677bpback to top |