FC921605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921605 vs. ExPASy Swiss-Prot
Match: RRP44_MOUSE (Exosome complex exonuclease RRP44 OS=Mus musculus GN=Dis3 PE=2 SV=4) HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28 Identity = 74/193 (38.34%), Postives = 110/193 (56.99%), Query Frame = 3 Query: 162 MLKSKSYSRKTKSNKIKKEVREVYLRDDIWXXXXXXXXXXXXXX--------RLSASTI------LVVDTNVVLNQIDLLENPAIXXXXXXXXXXXXXKNKNLSVYNRIRALCSNSLRNFYVFSNTFHKDTHVDKMDKESPNDLNDRAIRVATQWYQKHL-----GDATKVLLVTNDRENMRKATETGIFAET 683 ML+SK++ +KT++ + K VRE YLRDDI R AS++ L+ DTNV+L+QID+LE+PAI +N++ +Y RIR + +N ++FY F+N HK+T++++ E+ ND NDRAIRVA +WY +HL +V+L+TNDR+N KA + GI A T Sbjct: 1 MLRSKTFLKKTRAGGVVKIVREHYLRDDIGCGAPACSACGGAHAGPALELQPRDQASSLCPWPHYLLPDTNVLLHQIDVLEHPAIRNVIVLQTVMQEVRNRSAPIYKRIRDVTNNQEKHFYTFTNEHHKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKRVAADSQLQVILITNDRKNKEKAVQEGIPAFT 193
BLAST of FC921605 vs. ExPASy Swiss-Prot
Match: RRP44_HUMAN (Exosome complex exonuclease RRP44 OS=Homo sapiens GN=DIS3 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28 Identity = 75/193 (38.86%), Postives = 109/193 (56.48%), Query Frame = 3 Query: 162 MLKSKSYSRKTKSNKIKKEVREVYLRDDIWXXXXXXXXXXXXXXRLS--------ASTI------LVVDTNVVLNQIDLLENPAIXXXXXXXXXXXXXKNKNLSVYNRIRALCSNSLRNFYVFSNTFHKDTHVDKMDKESPNDLNDRAIRVATQWYQKHL-----GDATKVLLVTNDRENMRKATETGIFAET 683 MLKSK++ +KT++ + K VRE YLRDDI + AS++ L+ DTNV+L+QID+LE+PAI +N++ VY RIR + +N ++FY F+N H++T+V++ E+ ND NDRAIRVA +WY +HL + +V+ +TNDR N KA E GI A T Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVCPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFT 193
BLAST of FC921605 vs. ExPASy Swiss-Prot
Match: DIS3_SCHPO (Exosome complex exonuclease dis3 OS=Schizosaccharomyces pombe GN=dis3 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19 Identity = 63/194 (32.47%), Postives = 93/194 (47.94%), Query Frame = 3 Query: 168 KSKSYSRKTKSNKIKKEVREVYLRDDIWXXXXXXXXXXXXXXRLSASTIL-------------------VVDTNVVLNQIDLLENPA-IXXXXXXXXXXXXXKNKNLSVYNRIRALCSNSLRNFYVFSNTFHKDTHVDKMDKESPNDLNDRAIRVATQWYQKHLGD-ATKVLLVTNDRENMRKATETGIFAETM 686 + + + R T+ K++K VRE YLR+DI + S +L + D+N+ + ID LE+P +K++ +YNR++ LC + F FSN F DT V+++D ES ND NDRAIR A W+ HL K++L+T+DREN R A E GI T+ Sbjct: 18 RDRVFVRATRG-KVQKVVREQYLRNDIPCQSRACPLCRSKLPKDSRGNVLEPILSEKPMFLEKFGHHYLIPDSNIFYHCIDALEHPNNFFDVIILQTVFSEISSKSIPLYNRMKRLCQEKTKRFTPFSNEFFVDTFVERLDDESANDRNDRAIRNAASWFASHLASLGIKIVLLTDDRENARLAAEQGIQVSTL 210
BLAST of FC921605 vs. ExPASy Swiss-Prot
Match: RRP44_YEAST (Exosome complex exonuclease DIS3 OS=Saccharomyces cerevisiae GN=DIS3 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18 Identity = 54/120 (45.00%), Postives = 69/120 (57.50%), Query Frame = 3 Query: 315 LVVDTNVVLNQIDLLENP-AIXXXXXXXXXXXXXKNKNLSVYNRIRALC--SNSLRNFYVFSNTFHKDTHVDKMDKESPNDLNDRAIRVATQWYQKHLGD-ATKVLLVTNDRENMRKATE 662 +V+DTNVVL IDLLENP +NK+ VY R+R LC S+ + F VF N F + T V+++ E+ ND NDRAIR QWY +HL V+LVTNDR N AT+ Sbjct: 88 VVLDTNVVLQAIDLLENPNCFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRDSDDHKRFIVFHNEFSEHTFVERLPNETINDRNDRAIRKTCQWYSEHLKPYDINVVLVTNDRLNREAATK 207 The following BLAST results are available for this feature:
BLAST of FC921605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921605 ID=FC921605; Name=FC921605; organism=Citrus clementina; type=EST; length=740bpback to top |