FC921625

Overview
NameFC921625
Unique NameFC921625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14355 contig Ccv1_Contig14355:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC921625 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.333e-56
Identity = 115/177 (64.97%), Postives = 131/177 (74.01%), Query Frame = 3 
Query:  126 EAQLGMKVEDLWDVLEPQLSPTEKLNACFESIPVEAFP-PPPSQVIEIKSDTSLAEAVEILAQHRILSAPVVDVDAPEDASWIDRYIGIVEFAGIAVWILHQXXXXXXXXXXXXXXXXXXVNGMSKAALFKDLGPESASMTSGNFFEALTTSEFYKNTKVRDIAGSFRWAPFLALQK 653
            EA+LGM+VEDLWD  +PQLSP EKLNACFESIPV AFP    SQ IEI+SDTSLAEAV+ L++ ++LSAPVVDVDAPEDASWIDRYIGIVEF GI VW+LHQ                   NG S       L    +++TSGNFFE LT+SE YKNTKVRDI+G+FRWAPFLALQK
Sbjct:   25 EAKLGMRVEDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAVQTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQLEPPSPRSPAVAAS-----NGFSHDFTTDVLDNGDSAVTSGNFFEVLTSSELYKNTKVRDISGTFRWAPFLALQK 196
The following BLAST results are available for this feature:
BLAST of FC921625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KING1_ARATH8.333e-5664.97SNF1-related protein kinase regulatory subunit gam... [more]
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Properties
Property NameValue
Genbank descriptionC32107E02EF RVDevelopN Citrus clementina cDNA clone C32107E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921625 ID=FC921625; Name=FC921625; organism=Citrus clementina; type=EST; length=689bp
GGAGACAGAGAATCGAGAATAAGAAAAGAGAGTGTGTTGAGTTGAGAGCA
TTCGTATTGATGGCGAGTGTGCAATTACAGAGACAAGGGAGTAGTCCAAG
GCAACAGGATAGTCCTCGGAGTCCAGAGGCGCAGCTGGGGATGAAAGTGG
AGGATTTGTGGGACGTTTTGGAACCACAGCTGAGTCCCACGGAGAAGCTC
AACGCCTGCTTTGAAAGCATCCCTGTTGAGGCTTTCCCTCCTCCGCCTTC
ACAAGTGATTGAGATAAAATCGGACACCAGTCTAGCTGAAGCAGTTGAAA
TACTGGCCCAACACAGAATTCTTAGTGCTCCTGTAGTGGATGTTGATGCA
CCTGAGGATGCTAGTTGGATAGACAGATACATTGGCATTGTTGAGTTTGC
AGGAATTGCTGTATGGATTTTGCATCAGTCAGAACCTCCTTCTCCAAGGA
GTTCATCCCCTAGTTCTGCTTTGGCTGCAGCAGTTAATGGCATGTCTAAG
GCTGCTCTATTTAAGGATTTAGGCCCTGAATCTGCTTCAATGACTTCCGG
AAACTTTTTTGAAGCTTTGACTACTTCTGAATTCTATAAGAACACTAAGG
TACGAGACATCGCAGGGTCATTTCGCTGGGCTCCATTCCTTGCTCTGCAG
AAATCCACTCCTTCTTGACATGCTTCTGTTGCTTTCAAG
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