FC921630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921630 vs. ExPASy Swiss-Prot
Match: KIME_ARATH (Mevalonate kinase OS=Arabidopsis thaliana GN=At5g27450 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.095e-52 Identity = 113/188 (60.11%), Postives = 133/188 (70.74%), Query Frame = 1 Query: 106 MEVKARAPGKIILAGEHAVVHGSTAVAACIDLYTYVSLRFPAXXXXXXXXXXXXXX-MELNFSWSVTRIKATLSHLGSPF-PSTPTTCSMEVIKSIAVLVDEQNIPGAKIGLSSGATAFLWLYTSIIGFKPATVVVTSDLPLGAGLGSSAAFCVSLTAALLGSLNSVHLDKNHQGWLTYGESDLDLLN 663 MEVKARAPGKIILAGEHAVVHGSTAVAA IDLYTYV+LRFP + L FSWS+ RIK + + S STP +CS E +KSIAVLV+EQN+P K+ LSSG + FLWLYT IIGF PATVV+ S+LP G+GLGSSAA CV+LTAALL S S+ GW + E++L+LLN Sbjct: 1 MEVKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVTLRFPLPSAENNDRLTLQLKDISLEFSWSLARIKEAIPYDSSTLCRSTPASCSEETLKSIAVLVEEQNLPKEKMWLSSGISTFLWLYTRIIGFNPATVVINSELPYGSGLGSSAALCVALTAALLAS--SISEKTRGNGWSSLDETNLELLN 186
BLAST of FC921630 vs. ExPASy Swiss-Prot
Match: KIME_HUMAN (Mevalonate kinase OS=Homo sapiens GN=MVK PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.797e-15 Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 124 APGKIILAGEHAVVHGSTAVAACIDLYTYVSLRFPAXXXXXXXXXXXXXXMELNFSWSVTRIKA-TLSHLGSPFPSTPTTCSMEVIKSIAVLVDEQNIPGAKIGLSSGATAFLWLYTSIIGFKPA----TVVVTSDLPLGAGLGSSAAFCVSLTAALL 582 APGK+IL GEHAVVHG A+A ++L T++ L+ + + +W V R+++ S L +TPT+ +E +K +A L D+ + AFL+LY SI + A +VV S+LP GAGLGSSAA+ V L AALL Sbjct: 10 APGKVILHGEHAVVHGKVALAVSLNLRTFLRLQ----PHSNGKVDLSLPNIGIKRAWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDD-----CAVTERLAVLAFLYLYLSICRKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALL 158
BLAST of FC921630 vs. ExPASy Swiss-Prot
Match: KIME_BOVIN (Mevalonate kinase OS=Bos taurus GN=MVK PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13 Identity = 62/190 (32.63%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 124 APGKIILAGEHAVVHGSTAVAACIDLYTYVSLRFPAXXXXXXXXXXXXXXMELNFSWSVTRIK-ATLSHLGSPFPSTPTTCSMEVIKSIAVL----VDEQNIPGAKIGLSSGATAFLWLYTSIIGFKPA----TVVVTSDLPLGAGLGSSAAFCVSLTAALLGSLNSV-HLDKNHQGWLTYGESDLDLLN 663 APGK+IL GEHAVVHG A+A ++L T++ L+ + + +W V ++ S LG + T +E +K +A VD +++ AFL+LY SI + A + V S+LP GAGLGSSAA+ V L AALL + + + K+ + + E +L+L+N Sbjct: 10 APGKVILHGEHAVVHGKVALAVALNLRTFLRLQ----PHSNGRVGLNLPNIGVRRAWDVASLQLLDTSFLGHGDSAALTAKHVEKLKEVAGFPKDCVDPEHL---------AVLAFLYLYLSICQSQRALPSLDITVWSELPTGAGLGSSAAYSVCLAAALLTACEEIPNPLKDGEAAGRWTEENLELIN 186
BLAST of FC921630 vs. ExPASy Swiss-Prot
Match: KIME_MOUSE (Mevalonate kinase OS=Mus musculus GN=Mvk PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 60/165 (36.36%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 124 APGKIILAGEHAVVHGSTAVAACIDLYTYVSLRFPAXXXXXXXXXXXXXXMELNFSWSVTRI-KATLSHLGSPFPSTPTTCSMEVIKSIAVLVDEQNIPGAKIGLSSGA-TAFLWLYTSII----GFKPATVVVTSDLPLGAGLGSSAAFCVSLTAALLGSLNSV 600 APGK+IL GEHAVVHG A+AA ++L T++ LR + + W V + + S L S PT +E +K + ++P + G A AFL+LY +I +VV S+LP GAGLGSSAA+ V L AALL + V Sbjct: 10 APGKVILHGEHAVVHGKVALAAALNLRTFLLLR----PQSNGKVSVNLPNIGIKQVWDVGMLQRLDTSFLEQGDVSVPTLEQLEKLKKMG------DLPRDRAGNEGMALLAFLYLYLAICRKQRTLPSLDMVVWSELPPGAGLGSSAAYSVCLAAALLTACEEV 164
BLAST of FC921630 vs. ExPASy Swiss-Prot
Match: KIME_RAT (Mevalonate kinase OS=Rattus norvegicus GN=Mvk PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12 Identity = 67/190 (35.26%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 124 APGKIILAGEHAVVHGSTAVAACIDLYTYVSLRFPAXXXXXXXXXXXXXXMELNFSWSVTRIKATLSHLGSPF-----PSTPTTCSMEVIKSIAVLVDEQNIPGAKIGLSSGATAFLWLYTSII----GFKPATVVVTSDLPLGAGLGSSAAFCVSLTAALLGSLNSVHLDKNHQGWL-TYGESDLDLLN 663 APGK+IL GEHAVVHG A+A ++L T++ LR + + W V ATL L + F PT +E +K +A L ++ G + GLS AFL+LY +I ++V S+LP GAGLGSSAA+ V + AALL + V +G + ++ E DL +N Sbjct: 10 APGKVILHGEHAVVHGKVALAVALNLRTFLVLR----PQSNGKVSLNLPNVGIKQVWDV----ATLQLLDTGFLEQGDVPAPTLEQLEKLKKVAGL--PRDCVGNE-GLS--LLAFLYLYLAICRKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSIN 186
BLAST of FC921630 vs. ExPASy Swiss-Prot
Match: KIME_DICDI (Mevalonate kinase OS=Dictyostelium discoideum GN=mvk PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11 Identity = 54/164 (32.93%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 112 VKARAPGKIILAGEHAVVHGSTAVAACIDLYTYVSLRFPAXXXXXXXXXXXXXXMELNFSWSVTRIKATLSHLGSPFP-STPTTCSMEVIKSIAVLVDEQNIPGAKIGLSSGATAFLWLYTSIIG-FKPATVVVTSDLPLGAGLGSSAAFCVSLTAALLGSLNS 597 ++ APGKIIL GEHAVV TA+A+ + L T V+ P + WS+ K L H + P CS + + ++D G FL+L+ ++ K + +TSDLP+GAGLGSSA+FCVS+ A LL + ++ Sbjct: 9 IQVSAPGKIILFGEHAVVLEKTAIASALSLRTTVTFT-PNTNNTLLLDFPDLAGFGVR-EWSLDEFK-KLDHFPNDIDILKPIECSELFQQELNKIID-----------IKGIHTFLFLFCALTKCTKAYNIKITSDLPIGAGLGSSASFCVSICAGLLKAFDT 158 The following BLAST results are available for this feature:
BLAST of FC921630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921630 ID=FC921630; Name=FC921630; organism=Citrus clementina; type=EST; length=673bpback to top |