FC921664

Overview
NameFC921664
Unique NameFC921664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921664 vs. ExPASy Swiss-Prot
Match: FKB42_ARATH (42 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=FKBP42 PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 5.693e-86
Identity = 144/180 (80.00%), Postives = 163/180 (90.56%), Query Frame = 3
Query:   99 ESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYGAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEK 638
            ESEIVTE +A V  EP Q+G+ PPKVDSE EVL EKV+KQIIKEGHG KPSKYSTCFLHY AW ++++HKF+DTW EQQP+E+VLGKEKKE+ GLAIGV+SMK+GE AL+HVGWEL YGKEG+FSFPNV PMADL+YEV +IGFDETKEGKARSDMTVEERIGAADRRKMDGN+LFKEEK
Sbjct:   15 ESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEK 194          

HSP 2 Score: 36.5798 bits (83), Expect = 5.693e-86
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  628 RRKKLEEAMQQYEMXIAYMG 687
            + +KLEEAMQQYEM IAYMG
Sbjct:  191 KEEKLEEAMQQYEMAIAYMG 210          
BLAST of FC921664 vs. ExPASy Swiss-Prot
Match: FKBP5_RHIOR (FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP5 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 49/141 (34.75%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  207 VTKQIIKEGHGQKPSKYSTCFLHYGAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFK 629
            VTK+IIK G GQ+P   +   +HY A+   T  KFD +          L ++ K +    + + +M+ GE A +    + GYG +G      V P A L +EV LIGF E  +       +  ERI  A+++K +GNALFK
Sbjct:   10 VTKRIIKAGLGQRPEPTNFVSVHYDAYLLDTSEKFDSSRDRNTEFTFQL-RDSKVIEAWELAIPTMQVGELAEIICTSDYGYGDQGRQYI--VPPRAQLRFEVELIGFWEKPK-------SASERIRLAEKKKNEGNALFK 140          
The following BLAST results are available for this feature:
BLAST of FC921664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FKB42_ARATH5.693e-8680.0042 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKBP5_RHIOR9.562e-1234.75FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP... [more]
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Properties
Property NameValue
Genbank descriptionC32107H08EF RVDevelopN Citrus clementina cDNA clone C32107H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921664 ID=FC921664; Name=FC921664; organism=Citrus clementina; type=EST; length=687bp
CCGGGGCTCGCTCTTATCAAAGTTGATTCATTTTCAGTTTAGTCTCAATG
GAGGAAGTCGATGGGGAGCCAAAAAGTCAAGCACCTGGGGAAGTTGGTGA
AAGCGAAATAGTTACCGAGGATGCTGCATTCGTGCGCGGTGAGCCTCCTC
AAGATGGCGATGGGCCTCCAAAAGTAGATTCAGAAGTAGAAGTTCTTCAT
GAGAAAGTTACGAAGCAGATCATTAAGGAAGGTCATGGCCAAAAGCCCTC
CAAATATTCAACATGCTTCTTGCACTACGGGGCATGGGCGGAAAGCACCC
GGCACAAGTTTGATGATACATGGCTTGAACAACAACCGCTTGAAATGGTT
TTAGGAAAAGAGAAAAAAGAGATGACTGGCTTGGCTATTGGGGTGTCCAG
CATGAAGGCTGGTGAACATGCACTGTTACACGTGGGCTGGGAATTGGGTT
ATGGGAAAGAAGGAAGCTTTTCTTTCCCAAATGTGTCTCCCATGGCAGAC
TTAGTATATGAGGTTGTGCTCATTGGCTTTGACGAAACCAAAGAAGGGAA
AGCTCGTAGTGACATGACTGTCGAAGAAAGGATTGGTGCAGCAGACCGAA
GAAAGATGGATGGAAATGCCTTATTTAAGGAGGAAAAAACTGGAAGAGGC
CATGCAACAGTATGAAATGGNCATAGCTTATATGGGC
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