FC921676

Overview
NameFC921676
Unique NameFC921676
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.160e-56
Identity = 108/186 (58.06%), Postives = 139/186 (74.73%), Query Frame = 2
Query:  116 ALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            +L +   R++AA++NVT +LVFGDSSVDPGNNN + T  KGNF PYG+NF N +PTGR  DG LA D+IAE+ G+   IPAFLDP++ + DL  G SFASAGSGYDDLTAN+S+V S + Q  Y  HYKIHL  LVG  ++ ++I N+IFL+SMG+NDFL NY ++ TR +Q+TVEQY  +L   M
Sbjct:   23 SLDVHLLRQLAAKHNVTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPDYIAEAMGYP-PIPAFLDPSLTQADLTRGASFASAGSGYDDLTANISNVWSFTTQANYFLHYKIHLTKLVGPLESAKMINNAIFLMSMGSNDFLQNYLVDFTRQKQFTVEQYIEFLSHRM 207          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46
Identity = 82/165 (49.70%), Postives = 123/165 (74.55%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLV 664
            ++VFGDS+VD GNNN+++T  K NF PYG+++F+G+ TGRF++GR+A DFI+E  G  NA+PA+LDP     D   GV FASAG+G D+ T+ + SV+ + +++EY K Y+  L + +G +KA EII  S++L+S+GTNDFL NYYL P + R+Y+V +Y+ +L+
Sbjct:   30 LIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATSAVLSVMPLWKEVEYYKEYQTRLRSYLGEEKANEIISESLYLISIGTNDFLENYYLLPRKLRKYSVNEYQYFLI 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.980e-43
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 2
Query:  143 IAAQNNVTF------MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYL 661
            IA  + VTF      ++VFGDSSVD GNNN + T  + NF PYG++F  G+PTGRF +G++ATDF++E+ G    IPA+LDP+    D   GV+FASA +GYD+ T+++ SVL + +QLEY K Y+  L    G  +  E I +S++L+S+GTNDFL NY+  P RS QY+V  Y+++L
Sbjct:   14 IAMSSTVTFAGKIPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATSDVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFPGRSSQYSVSLYQDFL 192          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 82/174 (47.13%), Postives = 120/174 (68.97%), Query Frame = 2
Query:  152 QNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            +++V+ +LVFGDS+VDPGNNN + T  K NF PYG +F N  PTGRF +GRL TDFIA   G    +P +LDP +   +L+ GVSFASAGSGYD LT  +++V+ +  QLEY + YK  L   +G ++ E+ I  ++F +S GTNDF+ NY+  P R + +T+E Y+ +++S++
Sbjct:   42 KHSVSAILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSGYDPLTPTITNVIDIPTQLEYFREYKRKLEGKMGKQEMEKHIEEAMFCVSAGTNDFVINYFTIPIRRKTFTIEAYQQFVISNL 215          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 78/165 (47.27%), Postives = 120/165 (72.73%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLV 664
            ++VFGDSSVD GNNN ++T  + NF PYG++F  GR TGRF +GRL++DF +E++G    +PA+LDP+    D   GV FASAG+GYD+ TA++  V+ + +++EY K Y+ +L   +G ++A +II  S++++S+GTNDFL NYY  P R  Q+++ QY+++LV
Sbjct:   29 IIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTADVLGVIPLWKEVEYFKEYQSNLSAYLGHRRAAKIIRESLYIVSIGTNDFLENYYTLPDRRSQFSISQYQDFLV 193          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.792e-38
Identity = 79/170 (46.47%), Postives = 111/170 (65.29%), Query Frame = 2
Query:  161 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            V  ++ FGDS VD GNNN L T  + ++ PYG++F N + TGRF +G+LATD  AE+ GFT   PA+L P     +LL G +FASA SGYDD  A L+  + + +Q+EY K YK  L  + G KKA+ II  +I LLS G++DF+ NYY+ P   + YTV+ Y ++L+ +
Sbjct:   28 VPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKNLLIGANFASAASGYDDKAALLNHAIPLYQQVEYFKEYKSKLIKIAGSKKADSIIKGAICLLSAGSSDFVQNYYVNPLLYKVYTVDAYGSFLIDN 197          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.875e-37
Identity = 75/168 (44.64%), Postives = 111/168 (66.07%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            +LVFGDS++D GNNN + T  + NF PYG NF     TGRF++G+L  DFIA   G  + +P FLDP +   D++ GV FASAGSGYD+LT   +S LSV +Q + L+ Y   L  +VG +KA  I+  ++ ++S GTNDF  N Y  P+R ++  V+ Y+++++S++
Sbjct:   38 ILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLTDRATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVSEALVIVSSGTNDFNLNLYDTPSRRQKLGVDGYQSFILSNV 205          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.434e-36
Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  143 IAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVG-VKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVS 667
            I    N+  ++ FGDS +D GNNN L T TK NF PYG++F   R TGRF +GR+ TD IAE  G  N +PA+  P ++  D+L GVSFAS GSG D +TA +  V+ V  QL   K Y   L ++ G  +K   II N++F++S G ND    Y+  P R+ +YT+  Y + +VS
Sbjct:   20 IVHAGNIPAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPNDILTGVSFASGGSGLDPMTARIQGVIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDLMVS 195          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.434e-36
Identity = 75/170 (44.12%), Postives = 112/170 (65.88%), Query Frame = 2
Query:  161 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            V  +++ GDS VD GNNN   T  K NF PYG++F     TGRF++G+LATDF AE+ GFT+   A+L     + +LL G +FAS  SG+DD TA   + +++S+QL+  K Y+  + N+VG ++A EI   +I LLS G++DFL +YY+ P  +R +T +QY ++L+ S
Sbjct:   28 VPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDDATAIFYNAITLSQQLKNYKEYQNKVTNIVGKERANEIFSGAIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDHLLRS 197          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.577e-35
Identity = 82/173 (47.40%), Postives = 107/173 (61.85%), Query Frame = 2
Query:  158 NVTF--MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            NVT   ++ FGDS VD GNNN L T  K NF PYGK+F     TGRF+DGR+ +D +AE  G    IPA+L+P +K  DLL GV+FAS GSGYD LTA L  V+S+S QL+  + YK  L  +VG +KA  ++ NS++L+   +ND    Y     RS +Y    Y +YL  S
Sbjct:   45 NVTIPGIITFGDSIVDSGNNNHLRTALKCNFPPYGKDFPGKIATGRFSDGRVPSDIVAERLGIAETIPAYLNPKLKNEDLLKGVNFASGGSGYDPLTAKLVKVVSLSDQLKNFQEYKNKLKVIVGEEKANFLVKNSLYLVVASSNDIAHTY---TARSIKYNKTSYADYLADS 214          
The following BLAST results are available for this feature:
BLAST of FC921676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
GDL85_ARATH6.160e-5658.06GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]
GDL66_ARATH7.548e-4649.70GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL34_ARATH5.980e-4348.04GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL86_ARATH2.273e-4247.13GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL48_ARATH2.273e-4247.27GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
APG2_ARATH5.792e-3846.47GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL1_ARATH2.875e-3744.64GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL89_ARATH2.434e-3643.75GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL72_ARATH2.434e-3644.12GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL90_ARATH1.577e-3547.40GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32108A09EF RVDevelopN Citrus clementina cDNA clone C32108A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921676 ID=FC921676; Name=FC921676; organism=Citrus clementina; type=EST; length=677bp
GACGTTAACAAACAAAAGGTGCAAAAACTTGTCCTTCACAATTGCAATGG
CTCTGAAGGCTATGAGGGTGTTAGTGGTGATGGCTTTGGTGGCAGCCTTG
ATGCAACTCTCACAGGCTTTGGGCATTGCTCAATTTAGAAGAATAGCAGC
TCAAAACAATGTGACTTTTATGTTGGTTTTTGGAGATTCCAGTGTTGATC
CTGGCAACAACAACCGTCTTGCAACCACAACGAAGGGCAATTTTCTTCCT
TACGGGAAGAATTTCTTTAATGGCCGTCCCACTGGAAGGTTCACTGATGG
CAGGCTTGCCACTGACTTCATTGCTGAATCATTTGGCTTTACAAATGCCA
TTCCGGCCTTTCTTGATCCCACTATCAAGAAGATAGATTTGTTACATGGA
GTTAGCTTTGCTTCTGCCGGTTCCGGTTATGATGACCTCACTGCCAATCT
CTCTAGTGTGTTATCTGTATCAAGACAATTGGAGTACCTTAAGCATTACA
AGATTCACCTGGGAAATTTGGTGGGTGTGAAGAAGGCAGAAGAAATCATT
GGCAATTCAATATTTTTACTGAGTATGGGCACAAATGACTTCCTCCCAAA
TTATTACTTGGAGCCCACTCGCTCCAGGCAATATACTGTGGAACAGTATG
AAAATTACTTGGTCTCTTCAATGTTTG
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