FC921677

Overview
NameFC921677
Unique NameFC921677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9501 contig Ccv1_Contig9501:66..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 391.349 bits (1004), Expect = 2.201e-108
Identity = 187/209 (89.47%), Postives = 201/209 (96.17%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+AFEKLEKVGEGTYGKVYRAREKATG IVALKKTRLHED+EGVPPTTLRE+SILRML+RDPH+VRLMDVKQG NKEG+TVLYLVFEY+DTDLKK+IRSFRQ G+NIP NTVK LMYQLCKG+AFCHGHG+LHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP+KKYTHEILTLWYRAPEVLLG+THYST  DMWSV CIFAELVT+Q
Sbjct:   13 MEAFEKLEKVGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFIRSFRQAGQNIPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQ 221          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 387.111 bits (993), Expect = 4.151e-107
Identity = 187/209 (89.47%), Postives = 199/209 (95.22%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHED+EGVP TTLRE+SILRML+RDPHVVRLMDVKQG +KEG+TVLYLVFEYMDTD+KK+IRSFR TG+NIP  T+KSLMYQLCKG+AFCHGHGILHRDLKPHNLLMD KTM LKIADLGLARAFTLP+KKYTHEILTLWYRAPEVLLG+THYSTA DMWSV CIFAELVT Q
Sbjct:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVKQGLSKEGKTVLYLVFEYMDTDVKKFIRSFRSTGKNIPTQTIKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQ 219          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 5.421e-107
Identity = 188/209 (89.95%), Postives = 200/209 (95.69%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            MDAF KLEKVGEGTYGKVYRA EK+TGKIVALKKTRLHED+EGVPPTTLREVS+LRMLSRDPHVVRL+DVKQGQNKEG+TVLYLVFEYMDTDLKKYIRSF+QTGE+I    VKSLMYQLCKGVAFCHGHG+LHRDLKPHNLLMDRKTM LKIADLGLARA+TLPIKKYTHEILTLWYRAPEVLLG+THYS A DMWSVACIFAELVT++
Sbjct:   11 MDAFVKLEKVGEGTYGKVYRAMEKSTGKIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFKQTGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELVTQK 219          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 9.269e-99
Identity = 172/209 (82.30%), Postives = 191/209 (91.39%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            MD +EKLEKVGEGTYGKVY+AREKATG+IVALKKTRL EDDEGVPPT LREVS+LRMLS+D HVVRL+D+KQGQNKEG+T+LYLVFEYMDTDLKK+IR+ RQ  + IPV TVK LMYQLCKGVAFCHG G+LHRDLKPHNLLMDRKTM LKIADLGL+R+FT+P+KKYTHEILTLWYRAPEVLLG+ HYST  D+WSV CIFAEL T Q
Sbjct:   25 MDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELATNQ 233          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.995e-81
Identity = 144/212 (67.92%), Postives = 180/212 (84.91%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ +EKLEKVGEGTYGKVY+A+++ATG++VALKKTRL  D+EG+PPT LRE+SILR+LS+  +VVRL+ V+Q   K G+ VLYLVFE++DTDLKK++ ++R+ G N   +P N +KS +YQLCKGVA CHGHG+LHRDLKP NLL+D++   LKIADLGL RAFT+P+K YTHEI+TLWYRAPEVLLGSTHYST  D+WSV CIFAE+V RQ
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQA-TKNGKPVLYLVFEFLDTDLKKFVDAYRK-GPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQ 210          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 3.208e-75
Identity = 139/216 (64.35%), Postives = 171/216 (79.17%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQ-----GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ +EKLEKVGEGTYGKVY+A EK TGK+VALKKTRL  D+EG+PPT LRE+S+L+MLS   +VVRL+ V+       +++  ++ LYLVFEY+DTDLKK+I S+R+     P+    ++ LM+QLCKGVA CH HG+LHRDLKP NLL+ +    LKIADLGL RAFT+P+K YTHEI+TLWYRAPEVLLGSTHYST  DMWSV CIFAE+V RQ
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKGTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSTSIYVVRLLCVEHVHQPSTKSQSTKSNLYLVFEYLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMVRRQ 216          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 5.472e-75
Identity = 142/213 (66.67%), Postives = 174/213 (81.69%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQ-NKEGRTVLYLVFEYMDTDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ +EKLEKVGEGTYGKVY+A EK+TG++VALKKTRL  D+EGVPPT LREVS+L+MLS+  +VVRL+ V+     K G+ +LYLVFEY+DTDLKK+I S R+ G N   +P   ++S ++QLCKGV+ CH HG+LHRDLKP NLL+D+    LKIADLGLARAFT+P+K YTHEI+TL YRAPEVLLGS+HYSTA DM SV CIFAE+V RQ
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKALEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLSVEHVDCAKNGKPLLYLVFEYLDTDLKKFIDSHRK-GPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIFAEMVRRQ 212          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 2.079e-74
Identity = 139/218 (63.76%), Postives = 170/218 (77.98%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTV-------LYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ +EKLEKVGEGTYGKVY+A EK TGK+VALKKTRL  D+EG+PPT LRE+S+L+MLS+  ++VRL+ V+     +  TV       LYLVFEY+DTDLKK+I S R+     P+    V+  M+QL KGVA CH HG+LHRDLKP NLL+D+    LKIADLGL+RAFT+P+K YTHEI+TLWYRAPEVLLGSTHYSTA D+WSV CIFAE++ RQ
Sbjct:    1 MEKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDSTVSHSPKSNLYLVFEYLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQ 218          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.676e-64
Identity = 111/209 (53.11%), Postives = 162/209 (77.51%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            MD +EK+EK+GEGTYG VY+AR+K T + +ALKK RL ++DEGVP T +RE+S+L+ +    ++V+L DV   + +     LYLVFEY+D DLKK++ S     +++  + +K+ +YQ+ +G+A+CH H +LHRDLKP NLL+DR+T +LK+AD GLARAF +P++ +THE++TLWYRAPE+LLGS HYST  D+WSV CIFAE+++++
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHS-NIVKLQDVVHSEKR-----LYLVFEYLDLDLKKHMDSTPDFSKDL--HMIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIFAEMISQK 201          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.157e-63
Identity = 113/209 (54.07%), Postives = 157/209 (75.12%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            MD +EK+EK+GEGTYG VY+AR+K T + +ALKK RL ++DEGVP T +RE+S+L+ +    ++VRL DV   + +     LYLVFEY+D DLKK++ S     ++     +K  +YQ+ +G+A+CH H +LHRDLKP NLL+DR+T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLGS HYST  D+WSV CIFAE+V ++
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKR-----LYLVFEYLDLDLKKHMDSCPDFAKD--PRMIKRFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRQTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQK 201          
The following BLAST results are available for this feature:
BLAST of FC921677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB22_ARATH2.201e-10889.47Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CKB21_ARATH4.151e-10789.47Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA5.421e-10789.95Cell division control protein 2 homolog D OS=Antir... [more]
CKB21_ORYSJ9.269e-9982.30Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CKB11_ORYSJ2.995e-8167.92Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CKB11_ARATH3.208e-7564.35Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CDC2C_ANTMA5.472e-7566.67Cell division control protein 2 homolog C OS=Antir... [more]
CKB12_ARATH2.079e-7463.76Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDKA1_ARATH5.676e-6453.11Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDC2_CHERU2.157e-6354.07Cell division control protein 2 homolog OS=Chenopo... [more]

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Properties
Property NameValue
Genbank descriptionC32108A10EF RVDevelopN Citrus clementina cDNA clone C32108A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921677 ID=FC921677; Name=FC921677; organism=Citrus clementina; type=EST; length=646bp
AAGAATGGTGATGGACGCATTTGAGAAGCTAGAGAAAGTAGGAGAAGGGA
CGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCAACTGGGAAGATCGTT
GCTCTCAAGAAGACTCGTCTCCACGAGGACGATGAAGGCGTACCCCCAAC
CACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCTCTCGCGATCCCCATG
TTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGCAGGACG
GTGCTCTACCTTGTTTTTGAGTACATGGACACTGATCTGAAGAAGTACAT
CCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTGTTAACACTGTCAAGA
GCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGACATGGA
ATCCTTCATAGGGACCTTAAGCCTCACAATCTGTTGATGGACCGAAAGAC
TATGACACTTAAGATAGCAGATCTTGGTTTAGCTCGAGCATTTACTCTTC
CAATTAAGAAATATACTCATGAGATATTGACCCTCTGGTATAGGGCTCCG
GAAGTCCTTTTGGGGTCCACCCATTACTCAACTGCAGGTGATATGTGGTC
TGTTGCCTGTATATTTGCGGAACTGGTTACAAGACAGCACTTTTCC
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