FC921714

Overview
NameFC921714
Unique NameFC921714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15284 contig Ccv1_Contig15284:148..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADS3_ARATH (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.401e-77
Identity = 129/190 (67.89%), Postives = 155/190 (81.58%), Query Frame = 3
Query:  144 YGRILLSDVLVKRRRSL-FSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILPSIXXXXXXXXXXXFPF 710
            Y RI+LSDVLVK++  + +  R W ++D     VVL+MHLL+L APF F W ++ VAFGLY+VTGLLGITLSFHRNLSH++FKLPKWLEYLFAYCG Q+LQGNPIDWVSTHRYHHQFCDS+RDPHSP++GFWFSHM+W+FD +++ +RCG PNNVGDLEKQPFYRFLR+TYIL  +           FPF
Sbjct:   75 YRRIMLSDVLVKKKEKVVWWEREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTNTITQRCGEPNNVGDLEKQPFYRFLRTTYILHPLALAVALYAMGGFPF 264          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADS32_ARATH (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana GN=ADS3.2 PE=2 SV=3)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 99/170 (58.24%), Postives = 126/170 (74.12%), Query Frame = 3
Query:  150 RILLSDVLVKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYIL 659
            R LLS+V+V R +  F  R+W S D+S   + +  HLL+L APF F+W +  V   L  + G+  ITLS+HRNLSHRSF LPKWLEYLFAY GV + QG+PI+WVS HRYHH+ C+++RDPHSP +GFWFSHM+W+FD  S+LE CGG  NV DL +QPFYRFL+ T +L
Sbjct:   71 RRLLSEVVVVRTKRSFWERSWTSWDVSKLVIFVGTHLLSLLAPFYFSWEAFWVFPWLVFINGIC-ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSHMAWIFDTSSILENCGGEENVDDLVRQPFYRFLQRTVLL 239          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADS1_ARATH (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.712e-54
Identity = 96/160 (60.00%), Postives = 124/160 (77.50%), Query Frame = 3
Query:  177 KRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYI 656
            +++R+++  R W  LDI  A   L +H L L APF FTW +LRVA  +Y V GL GIT+S+HRNL+HRSFK+PKWLEY FAYCG+ ++QG+PIDWVSTHRYHHQF DS+RDPHSP EGFWFSH+ WLFD   ++E+CG   NV DL++Q +Y+FL+ T +
Sbjct:   24 RKKRAMWE-RKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGL-GITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQWYYKFLQRTVL 181          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADS2_ARATH (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.842e-53
Identity = 95/160 (59.38%), Postives = 118/160 (73.75%), Query Frame = 3
Query:  177 KRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYI 656
            K+RR +F  R W  LD         +H LAL APF FTWS+L V F  Y + GL GIT+S+HRNL+HRSFK+PKWLEYL AYC + ++QG+PIDWVSTHRYHHQF DSERDPHSP EGFWFSH+ W++D   ++ +CG   NV DL++Q FYRFL+ T +
Sbjct:   25 KKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFYFTWSALWVTFLFYTIGGL-GITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIYDSAYLVSKCGRRANVEDLKRQWFYRFLQKTVL 183          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADSL1_ARATH (Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana GN=At1g06090 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.194e-52
Identity = 95/159 (59.75%), Postives = 119/159 (74.84%), Query Frame = 3
Query:  174 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRST 650
            V+  +  F  R W  +DI+ A  V A+HLL L APF + W +LR    L +VT L  IT S+HRNL+H+SFKLPKWLEY FAY  + +LQG+PIDWVSTHR+HHQF DS+RDPHSPIEGFWFSH+ W+FD   + E+CGG +NV DL++Q FYRFLR+T
Sbjct:   16 VRGEKRAFFFRKWTRIDIARASAVGAVHLLCLLAPFNYKWEALRFGVILAIVTSL-SITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDNVMDLKQQWFYRFLRNT 173          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADSL3_ARATH (Delta-9 desaturase-like 3 protein OS=Arabidopsis thaliana GN=At1g06120 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.320e-51
Identity = 92/159 (57.86%), Postives = 118/159 (74.21%), Query Frame = 3
Query:  174 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRST 650
            V++ +  F  R W  +D+     V A+HLL L APF +TW + R A  + + T L  IT S+HRNL+HRSFKLPKWLEY FAY  + +LQG+PIDWVSTHR+HHQF DS+RDPHSPIEGFWFSH+ W+FD   + E+CGG +NV DL++Q FYRFL++T
Sbjct:   16 VRKEKRAFLFRKWTRVDVMRVSAVGAVHLLCLLAPFNYTWEAFRFAAMVGISTNL-SITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDNVMDLKQQWFYRFLQNT 173          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADSL2_ARATH (Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana GN=At1g06100 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.841e-51
Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 3
Query:  174 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYIL 659
            V++ +  +  R W   D+  A  V  +HLL L APF + W + R    L ++T L  IT S+HRNL+HRSFKLPKWLEY FAY  + +LQG+P+DWVS HR+HHQF DS+RDPHSPIEGFWFSH+ W+FD D + E+CG  NNV DL++Q FYRFL+ T +L
Sbjct:   16 VRKEKRAYVLRKWTQFDVGRASTVGTVHLLCLLAPFNYKWEAFRFGIILAILTNLC-ITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVLWIFDTDYIREKCGRRNNVMDLKQQWFYRFLKKTLVL 176          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADSL5_ARATH (Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana GN=At1g06360 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.044e-48
Identity = 90/159 (56.60%), Postives = 112/159 (70.44%), Query Frame = 3
Query:  174 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRST 650
            V + +  +  R W+  DI  A  V+ +H L L APF + W +LR  F LY +T L  IT S+HRNL+HRSFKLPKWLEY  AY  V +LQG+P+DWVS HR+HHQF DS+RDPHSPIEGFWFSH+ W+ D   +  +CGG NNV DL++Q FY FLR T
Sbjct:   16 VSKEKRPYIHREWSWADIIRALTVINVHFLCLLAPFNYKWEALRFGFVLYALTSL-SITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGRNNVMDLKQQWFYWFLRMT 173          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ADSL4_ARATH (Delta-9 desaturase-like 4 protein OS=Arabidopsis thaliana GN=At1g06350 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.577e-47
Identity = 90/161 (55.90%), Postives = 114/161 (70.81%), Query Frame = 3
Query:  168 VLVKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRST 650
            V   ++R+ F  R W  +D+  A VV+ +H L L APF F W +LR    L+ +T  L IT SFHRNLSHRSFK+PKWLEY +AY  V +LQG+P+DWVS HR+HHQF DS+RDPHSP EG  FSH+ W+FD   +  +CGG +NV DL+KQ FY+FLR T
Sbjct:   16 VSTMQKRAYFQ-RQWPLVDVVRASVVVIVHFLCLLAPFNFKWEALRFGLVLFALT-TLSITFSFHRNLSHRSFKIPKWLEYPWAYSAVFALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYIKYKCGGRDNVLDLKKQWFYKFLRRT 174          
BLAST of FC921714 vs. ExPASy Swiss-Prot
Match: ACO1_SCHPO (Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe GN=SPCC1281.06c PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 45/145 (31.03%), Postives = 78/145 (53.79%), Query Frame = 3
Query:  210 WNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGL--YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRF 638
            W  L+     ++  + ++A++  F     +  + F +  Y  +GL GIT  +HR  SHR++K  K LEY  A  G  + +G+   W   HR HH++ D+++DP++  +GFW++H+ W+    +   R  G ++V DL   PF  F
Sbjct:   59 WRHLNWLHCMLIFGLPMIAIYGVFTTPLQTKTLIFAIIYYAYSGL-GITAGYHRLWSHRAYKAKKPLEYFLAAGGAAAFEGSIRWWSRDHRAHHRYTDTDKDPYNVKKGFWYAHVGWMIILQN--PRRIGRSDVSDLNSDPFVMF 200          
The following BLAST results are available for this feature:
BLAST of FC921714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ADS3_ARATH1.401e-7767.89Palmitoyl-monogalactosyldiacylglycerol delta-7 des... [more]
ADS32_ARATH8.835e-5658.24Probable lipid desaturase ADS3.2, chloroplastic OS... [more]
ADS1_ARATH3.712e-5460.00Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis tha... [more]
ADS2_ARATH1.842e-5359.38Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis tha... [more]
ADSL1_ARATH1.194e-5259.75Delta-9 desaturase-like 1 protein OS=Arabidopsis t... [more]
ADSL3_ARATH1.320e-5157.86Delta-9 desaturase-like 3 protein OS=Arabidopsis t... [more]
ADSL2_ARATH3.841e-5155.56Delta-9 desaturase-like 2 protein OS=Arabidopsis t... [more]
ADSL5_ARATH3.044e-4856.60Delta-9 desaturase-like 5 protein OS=Arabidopsis t... [more]
ADSL4_ARATH2.577e-4755.90Delta-9 desaturase-like 4 protein OS=Arabidopsis t... [more]
ACO1_SCHPO1.056e-1631.03Probable acyl-CoA desaturase OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionC32108E03EF RVDevelopN Citrus clementina cDNA clone C32108E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921714 ID=FC921714; Name=FC921714; organism=Citrus clementina; type=EST; length=710bp
ACAAGCTAATAAAAACGAGCTTTGTGTATCATGTTTATAAATATAACAAA
AGAGAGTCACTAGCAATTGTTAATGCAGCATCAATTGAATCGACAGAACC
AAAGCCAGAGCCAGAGCCAGAGCAAATTCCCGAAGTGGAAACTTATGGGA
GAATTTTGTTATCTGATGTGTTGGTGAAGAGGAGAAGAAGTTTATTTTCT
GGGAGGAATTGGAACTCATTGGATATAAGCACAGCTGGTGTTGTTTTGGC
AATGCATTTGCTTGCTCTCTTTGCGCCATTTTGTTTCACGTGGAGTTCTC
TTAGGGTTGCTTTTGGACTTTATGTTGTGACTGGACTTCTGGGTATCACT
CTTTCTTTTCACAGAAACCTTTCTCATAGGAGTTTTAAATTACCCAAATG
GCTTGAGTACTTGTTTGCTTATTGCGGAGTTCAGTCTCTTCAGGGGAATC
CAATTGATTGGGTAAGCACACATAGGTATCATCACCAGTTTTGTGATTCC
GAAAGGGATCCGCATAGTCCCATTGAAGGGTTTTGGTTTAGTCACATGAG
TTGGCTGTTTGATAAGGATTCTGTTCTCGAAAGGTGTGGAGGGCCCAACA
ATGTGGGAGATTTAGAGAAGCAGCCTTTCTATAGATTCTTAAGAAGCACT
TACATTCTCCCATCCATTGCACTTGGAGGCTTGCTATATGCACTGGGAGG
CTTTCCTTTC
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