FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.999e-71
Identity = 126/210 (60.00%), Postives = 166/210 (79.05%), Query Frame = 3
Query:  108 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA----TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            P+ KGLSW FY ++CPK+E+I+RK+++   K+DIGLAA ++RIHFHDCFVQGC+ SVLL GS S   EQ++ PNL+LR++A   +++LRA V K+CG+VVSC+DILALAARDSV LSGGP+Y +PLGRRDS  FA    T+ NLP PF N + ++ DF  +  N  + VALSGGHT+G+AHCP+FT+RLYP QDPT+++ FAN+LKR  P
Sbjct:   39 PIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCP 248          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.218e-52
Identity = 104/182 (57.14%), Postives = 137/182 (75.27%), Query Frame = 3
Query:   96 AQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 617
            A++PP+A GLS+ FY +SCPK ESIVR  +Q+A+++D+GLAAGL+R+HFHDCFVQGCD SVLL+GS +   EQ A PNL+LR  A K ++D+  R+HKEC G VVSC+D+LALAARDSV +SGGP+Y +PLGRRDS +FAT    +  LP P +    +L    +   +A + VALSGGHT+
Sbjct:   32 ARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.433e-47
Identity = 97/206 (47.09%), Postives = 137/206 (66.50%), Query Frame = 3
Query:  114 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKR 707
            ++GL   FY ++CP+LE IV+K + +A+ K   L A L+R+ FHDCFV+GCDGSVLL+   +  E++A PNLSLR      +DD +A + K C  +VSC+DILAL ARD++    GP++++  GRRD + +    VNLPSPF N T +++DFR K  N ++ V LSGGHT+G+ HCP  TNRLY        DP+LD  +A  L++
Sbjct:   23 SQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQGEKSAVPNLSLR--GFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRK 226          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.906e-46
Identity = 97/203 (47.78%), Postives = 134/203 (66.01%), Query Frame = 3
Query:  114 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKR 707
            A+GLS T+Y  SCP  E IV+  + NAL+ D  LAAGLIR+ FHDCF++GCD S+LL+    +T+E+++  NLSLR    + +DD + ++   C  VVSCADI+A+AARD+V  +GGP YD+P GR D K        NLPSPF N + ++  F ++ F  ++ VALSG HT+G+A C +F  RL    D +LD TFAN L +
Sbjct:   23 ARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLR--GYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL-TVPDSSLDSTFANTLSK 222          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.474e-46
Identity = 93/210 (44.29%), Postives = 136/210 (64.76%), Query Frame = 3
Query:  105 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLK 704
            P   +GL   FYD++CPK E IV+K +  A+K D  +AA L+R+ FHDCFV+GC+GSVLLE      E+N+ PNL+LR    + +D+++A + KEC  +VSC+D+LAL ARD++    GP++++  GRRD   +     ++NLPSPF+N + ++  F+ K  + ++ V LSGGHT+G  HCP  TNRLY        DP LD  +A  L+
Sbjct:   26 PTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKDEKNSIPNLTLR--GFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLR 233          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.196e-45
Identity = 93/209 (44.50%), Postives = 132/209 (63.16%), Query Frame = 3
Query:  108 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLK 704
            P+   L   FY  SCP  E IV+  + N +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL++R     F+D +++ +  +C  +VSCADI+ALA+RD+V  +GGPN+ +P GRRD   S     + N+P P SN T +   F  +  + ++ V LSG HT+G++HC +FTNRLY       QDP LD  +A NLK
Sbjct:   21 PIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVR--GFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLK 227          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45
Identity = 97/205 (47.32%), Postives = 133/205 (64.88%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD----SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLK 704
            L   FY +SCP  E I+   IQN +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL+LR     FV+ ++A + K C + VSCADI+AL ARD+V  +GGP++ +P GRRD    +KT AT  N+P P SN T +   F+ +  N ++ V LSG HT+G++HC +   RLY      KQDP+LD  +A NLK
Sbjct:   29 LQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLR--GFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEAT-NNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLK 230          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.221e-44
Identity = 90/206 (43.69%), Postives = 132/206 (64.08%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQN----ARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVV-NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLK 704
            L   FYDQ+CP  E IV+  +   +     LAAGLIR+HFHDCFV+GCDGS+L+  ++S Q     A PNL++R     F+D +++ +  +C  +VSCADI+ LA RDS+   GGP +++P GRRD +   FA  + N+P PF N T ++  F  +  + ++ V LSG HT+G++HC +F+NRL+       QDP+LD  +A+NLK
Sbjct:   25 LKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVR--GFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLK 228          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.221e-44
Identity = 96/201 (47.76%), Postives = 126/201 (62.69%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFAT-VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            +Y  SCPK ESIVR  +++    D  ++ GL+R+HFHDCFVQGCDGSVL++G ++EQ A PNL LR   L+ +DD +AR+   C  VVSCADILALAARDSV LS GP++ +P GR+D + + AT   NLPSP  +  V    F++K  +  + V L G HT+G   C  F  RLY        DPT+  +F   LK   P
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSAEQAALPNLGLR--GLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASNLPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP 231          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44
Identity = 91/201 (45.27%), Postives = 127/201 (63.18%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY ++CP+ ESIVR  +++ +  D  LAA ++R+HFHDCFVQGCDGS+L+ G  +E+ A  NL LR    + +DD + ++   C  VVSCADILALAARDSV LSGG ++ +P GRRD +    + V NLP+P  +  V    F  K  N ++ V L GGHT+G + C  F+NRL+        DP +D +F +NL+   P
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPATEKTAFANLGLR--GYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCP 234          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER12_ARATH1.999e-7160.00Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER1_SORBI1.218e-5257.14Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER27_ARATH3.433e-4747.09Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER47_ARATH2.906e-4647.78Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER56_ARATH6.474e-4644.29Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER3_ARATH4.196e-4544.50Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER30_ARATH5.481e-4547.32Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER39_ARATH1.221e-4443.69Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER25_ARATH1.221e-4447.76Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER2_ARAHY3.552e-4445.27Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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