FC923133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RK11_ARATH (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana GN=RPL11 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 7.686e-76 Identity = 149/196 (76.02%), Postives = 165/196 (84.18%), Query Frame = 1 Query: 103 LSSNSNVSLPFYDNKVKPSPLLSSTPRFLTVIAMXXXXXXXXXXXXXXXXLIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDIDPPVLETKRXTLII 690 LSS +NVS+ F K SPLLSSTPRFLTVIAM +IKLALEAGKATPAPPVGPALG+KGVNIMAFCKDYNARTADKAGY+IPVEITV+DD+SFTFILKTPPASVLLLKAAGVEKGSKDP+Q +VG ITI+QLR IA EKLPDLNCT+IESAMRIIAGTAANMGIDIDPP+LE K+ +++ Sbjct: 31 LSSKANVSVQFLGKK--QSPLLSSTPRFLTVIAMAPPKPGGKAKKVVG--VIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKKAVLL 222
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RK11_SPIOL (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea GN=rpl11 PE=1 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.270e-70 Identity = 141/202 (69.80%), Postives = 166/202 (82.18%), Query Frame = 1 Query: 82 LFPSAINLSSNSNVSLPFYDNKVKPSPLLSSTPRFLTVIAMXXXXXXXXXXXXXXXXLIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDIDPPVLETKRXTLI 687 L PS+++LSSN SL F ++K+ SP S++ R L+++AM +IKLALEAGKATPAPPVGPALG+KGVNIMAFCKDYNARTADK G+VIPVEITV+DD+SFTFILKTPPASVLLLKA+G EKGSKDP+ ++VGKITI+QLR IATEKLPDLNCT+IESAMRIIAGTAANMGIDIDPP+L K+ +I Sbjct: 27 LTPSSLSLSSNPRNSLQFLNSKLFLSPP-STSHRRLSIVAMAPKPGKAKKVIG----VIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGFVIPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIATEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEVI 223
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RK11_GUITH (50S ribosomal protein L11, chloroplastic OS=Guillardia theta GN=rpl11 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.490e-50 Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNARTADKAG +IPVEITVY+D+S+TF+LKTPPASVLL KAAGV+KGS +PK+ QVG +T +Q+ IA KLPDLN +ESA+RII GTA NMGI + Sbjct: 8 IIKLALEAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVYEDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRLESAIRIIEGTAKNMGIGV 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_SYNR3 (50S ribosomal protein L11 OS=Synechococcus sp. (strain RCC307) GN=rplK PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.614e-49 Identity = 96/132 (72.73%), Postives = 112/132 (84.85%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLAL+AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL++KAAG+EKGS + + VG IT QL IA KLPDLNC+S+ESAMRII GTA NMG+ + Sbjct: 8 VIKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLIVKAAGIEKGSGESAKGSVGSITRAQLEEIANTKLPDLNCSSVESAMRIIEGTARNMGVAV 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_PROM5 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplK PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.614e-49 Identity = 97/132 (73.48%), Postives = 111/132 (84.09%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLAL+AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKGS + + VG I+ QL IA KLPDLNCTSIESAM++I GTA NMGI I Sbjct: 8 VIKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGESSKGSVGNISKSQLEEIAKTKLPDLNCTSIESAMKVIEGTARNMGISI 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_CYAP4 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplK PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.614e-49 Identity = 94/132 (71.21%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLA+ AGKA PAPP+GPALG GVNIM FCK+YNARTAD+AG VIPVEI+VY+DRSFTFILKTPPASVL+ KAAG+E+GS +P +++VGKIT QLR IA KLPDLN +++AMRI+AGTA NMG+ I Sbjct: 8 IIKLAITAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVYEDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDVDAAMRIVAGTARNMGVTI 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_SYNS3 (50S ribosomal protein L11 OS=Synechococcus sp. (strain CC9311) GN=rplK PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.753e-49 Identity = 96/132 (72.73%), Postives = 110/132 (83.33%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLAL+AGKA PAPPVGPALG GVNIMAFCK+YNART DKAGYVIPVEI+V++DRSFTFI KTPPASVL+ KAAG++KGS + + VG I QL IA KLPDLNCTS+ESAMR+I GTA NMG+ I Sbjct: 8 VIKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGYVIPVEISVFEDRSFTFITKTPPASVLITKAAGIQKGSGESAKGSVGSINRSQLEEIAKTKLPDLNCTSVESAMRVIEGTARNMGVAI 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_SYNPW (50S ribosomal protein L11 OS=Synechococcus sp. (strain WH7803) GN=rplK PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.753e-49 Identity = 98/132 (74.24%), Postives = 110/132 (83.33%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLAL+AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKGS + + VG I QL IA KLPDLNCTSIESAMRII GTA NMG+ I Sbjct: 8 VIKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGESAKGSVGSIKRSQLEEIAKTKLPDLNCTSIESAMRIIEGTARNMGVAI 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_SYNE7 (50S ribosomal protein L11 OS=Synechococcus elongatus (strain PCC 7942) GN=rplK PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.696e-49 Identity = 96/132 (72.73%), Postives = 111/132 (84.09%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 LIKLAL AGKA PAPPVGPALG GVNIMAFCK+YNART DK G VIPVEI+V++DRSFTFILKTPPASVL+ KAAG+E+GS +P + +VGKIT QLR IA KLPDLN ++E+AMRI+ GTA NMG+ I Sbjct: 8 LIKLALPAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKVGLVIPVEISVFEDRSFTFILKTPPASVLIAKAAGIERGSGNPNKTKVGKITTAQLREIAETKLPDLNTKNVEAAMRIVEGTARNMGVTI 139
BLAST of FC923133 vs. ExPASy Swiss-Prot
Match: RL11_PROMP (50S ribosomal protein L11 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplK PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.696e-49 Identity = 95/132 (71.97%), Postives = 111/132 (84.09%), Query Frame = 1 Query: 253 LIKLALEAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQQVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 648 +IKLAL+AGKA PAPPVGPALG GVNIMAFCK+YNART DKAG+VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKG+ + + VG I+ QL IA KLPDLNCTSIESAM++I GTA NMG+ I Sbjct: 8 VIKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNARTQDKAGFVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGAGESSKGSVGNISKSQLEEIAKTKLPDLNCTSIESAMKVIEGTARNMGVSI 139 The following BLAST results are available for this feature:
BLAST of FC923133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923133 ID=FC923133; Name=FC923133; organism=Citrus clementina; type=EST; length=710bpback to top |